BP916603 |
Clone id |
YMU001_000089_E04 |
Library |
YMU01 |
Length |
487 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000089_E04. |
Accession |
BP916603 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4122Contig1 |
Sequence |
TGCAAGTGTTGTGGATGAGGAGAAAACCATAATGCAGTCTCTTAGTAAGGACATGAATAC TGTGAAGAAGTTGGTTGATGATTGTGTAACCAGCAGCTTGTCTATGTCAATGAGACCGCA TGATGCAGTGTCTGCTTTGGGACCAATGTATCATGTGCATGTAAATAGCCACCTTCCCAA GATGGACCATTGCTATCAAAGGATAGAGAAACTTCTGGAGAGTTTTGTTGCTAAAAAGCA TGAAATGGGTTGCTGTGTGCATACTTGTATGCAGAGGGTTGCAGCTCTGCAGTCAAGCAT CCGTGATGTCCGCAATCAGCTGGCAGCTTTCAGAGAAGCATTGTCCCGCCAAGAGGAGGT ATTTAAGGATTTGAAGCTTGTCAGGCAGATTGGTCCAGCATACAGAGCATGTCTTGCGGA GGTTGTAAGGAGAAAAGCGAGTATGAAGCTCTACATGGGTCAAGCTGGCCAGTTGGCAGA GAGAATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q60563 |
Definition |
sp|Q60563|SYCP1_MESAU Synaptonemal complex protein 1 (Fragment) OS=Mesocricetus auratus |
Align length |
129 |
Score (bit) |
34.3 |
E-value |
0.31 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TRX9 |
Definition |
tr|A9TRX9|A9TRX9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
158 |
Score (bit) |
213.0 |
E-value |
5.0e-54 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916603|Adiantum capillus-veneris mRNA, clone: YMU001_000089_E04. (487 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TRX9|A9TRX9_PHYPA Predicted protein (Fragment) OS=Physcomit... 213 5e-54 tr|A9SER7|A9SER7_PHYPA Predicted protein (Fragment) OS=Physcomit... 211 2e-53 tr|Q9SUG7|Q9SUG7_ARATH Putative uncharacterized protein T10C21.1... 208 1e-52 tr|A5BAS0|A5BAS0_VITVI Putative uncharacterized protein OS=Vitis... 204 2e-51 tr|A7PFL5|A7PFL5_VITVI Chromosome chr11 scaffold_14, whole genom... 201 1e-50 tr|A2X1L8|A2X1L8_ORYSI Putative uncharacterized protein OS=Oryza... 169 6e-41 tr|Q6ETK7|Q6ETK7_ORYSJ Os02g0179800 protein OS=Oryza sativa subs... 169 8e-41 tr|A3A3S8|A3A3S8_ORYSJ Putative uncharacterized protein OS=Oryza... 169 8e-41 tr|A8J9G0|A8J9G0_CHLRE Predicted protein OS=Chlamydomonas reinha... 66 8e-10 tr|B4JGX8|B4JGX8_DROGR GH19504 OS=Drosophila grimshawi GN=GH1950... 44 0.004 tr|B4NLC7|B4NLC7_DROWI GK13205 OS=Drosophila willistoni GN=GK132... 43 0.009 tr|B4QX05|B4QX05_DROSI GD19810 OS=Drosophila simulans GN=GD19810... 42 0.015 tr|B4I457|B4I457_DROSE GM10831 OS=Drosophila sechellia GN=GM1083... 42 0.015 tr|Q6IDE5|Q6IDE5_DROME LD09358p OS=Drosophila melanogaster PE=2 ... 42 0.020 tr|Q9VNG5|Q9VNG5_DROME CG1347, isoform A OS=Drosophila melanogas... 41 0.026 tr|Q7KTS2|Q7KTS2_DROME CG1347, isoform B OS=Drosophila melanogas... 41 0.026 tr|Q297M2|Q297M2_DROPS GA12308 OS=Drosophila pseudoobscura pseud... 41 0.026 tr|B6IDM3|B6IDM3_DROME FI04107p OS=Drosophila melanogaster GN=CG... 41 0.026 tr|B4G480|B4G480_DROPE GL24513 OS=Drosophila persimilis GN=GL245... 41 0.026 tr|Q4CQI9|Q4CQI9_TRYCR MYH7B protein, putative OS=Trypanosoma cr... 41 0.034 tr|B3P2I4|B3P2I4_DROER GG12986 OS=Drosophila erecta GN=GG12986 P... 41 0.034 tr|B4PUW6|B4PUW6_DROYA GE10154 OS=Drosophila yakuba GN=GE10154 P... 40 0.045 tr|B4KBI0|B4KBI0_DROMO GI23775 OS=Drosophila mojavensis GN=GI237... 39 0.13 tr|Q5KHT3|Q5KHT3_CRYNE Putative uncharacterized protein OS=Crypt... 38 0.22 tr|A8Q299|A8Q299_MALGO Putative uncharacterized protein OS=Malas... 38 0.22 tr|B5Y5S6|B5Y5S6_PHATR Predicted protein OS=Phaeodactylum tricor... 38 0.29 tr|B3LWF6|B3LWF6_DROAN GF16341 OS=Drosophila ananassae GN=GF1634... 38 0.29 tr|Q4P972|Q4P972_USTMA Putative uncharacterized protein OS=Ustil... 38 0.29 tr|B4LZ64|B4LZ64_DROVI GJ23957 OS=Drosophila virilis GN=GJ23957 ... 37 0.50 tr|Q4DC65|Q4DC65_TRYCR Putative uncharacterized protein OS=Trypa... 37 0.65
>tr|A9TRX9|A9TRX9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_149629 PE=4 SV=1 Length = 1130
Score = 213 bits (541), Expect = 5e-54 Identities = 103/158 (65%), Positives = 130/158 (82%) Frame = +2
Query: 14 DEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSHLPKMDHC 193 DE+ +I+QSLSKD+NTVKKLVDDCV S ++RPHDAVSALGPMY VH +H+P+++ C Sbjct: 292 DEQASIVQSLSKDVNTVKKLVDDCVCGQYSGNLRPHDAVSALGPMYDVHDKNHIPRLEAC 351
Query: 194 YQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFKDL 373 +E LLE K++M CVHT +Q VAALQS+IRD+RNQLA F+EAL RQ + F +L Sbjct: 352 DMELENLLEYCKKSKNKMNLCVHTRLQNVAALQSNIRDMRNQLAVFKEALVRQSDHFAEL 411
Query: 374 KLVRQIGPAYRACLAEVVRRKASMKLYMGQAGQLAERM 487 KL+R++GP+Y+ACLAEVVRRKASMKLYMGQAGQLAE++ Sbjct: 412 KLLRRVGPSYKACLAEVVRRKASMKLYMGQAGQLAEKL 449
>tr|A9SER7|A9SER7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_128679 PE=4 SV=1 Length = 1135
Score = 211 bits (536), Expect = 2e-53 Identities = 100/158 (63%), Positives = 131/158 (82%) Frame = +2
Query: 14 DEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSHLPKMDHC 193 +E+ +I+QSLSKD+NTVKKLVDDCV+ S ++RPHDAVSALGPMY VH +HLP+++ C Sbjct: 292 EEQSSIVQSLSKDVNTVKKLVDDCVSGQYSGNLRPHDAVSALGPMYDVHDKNHLPRLEAC 351
Query: 194 YQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFKDL 373 ++ LLE K++M CVHT +Q VAALQS+IR +RNQLA F+EA++RQ + F +L Sbjct: 352 DMELDNLLEHSKKSKNQMNLCVHTRLQNVAALQSNIRGMRNQLAVFKEAMARQSDHFSEL 411
Query: 374 KLVRQIGPAYRACLAEVVRRKASMKLYMGQAGQLAERM 487 KL+R++GP+Y+ACLAEVVRRKASMKLYMGQAGQLAE++ Sbjct: 412 KLLRRVGPSYKACLAEVVRRKASMKLYMGQAGQLAEKL 449
>tr|Q9SUG7|Q9SUG7_ARATH Putative uncharacterized protein T10C21.140 (Putative uncharacterized protein AT4g30790) OS=Arabidopsis thaliana GN=T10C21.140 PE=2 SV=1 Length = 1148
Score = 208 bits (530), Expect = 1e-52 Identities = 103/159 (64%), Positives = 126/159 (79%) Frame = +2
Query: 11 VDEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSHLPKMDH 190 +DEEK+IMQSLSKD+NTVKKLVDDC++S +S S+RPHDAVSALGPMY VH +HLPKM Sbjct: 304 IDEEKSIMQSLSKDVNTVKKLVDDCMSSQVSSSLRPHDAVSALGPMYEVHDKNHLPKMQA 363
Query: 191 CYQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFKD 370 CY I +LL+ KK+EM VH MQ++ + I+D + Q FREA+ RQ+++F D Sbjct: 364 CYNSISELLDFCKNKKNEMNNFVHGYMQKITYVTYIIKDAKLQFPVFREAMVRQDDLFAD 423
Query: 371 LKLVRQIGPAYRACLAEVVRRKASMKLYMGQAGQLAERM 487 LKLVR +GPAYRACLAEVVRRKASMKLYMG AGQLAE++ Sbjct: 424 LKLVRGVGPAYRACLAEVVRRKASMKLYMGMAGQLAEKL 462
>tr|A5BAS0|A5BAS0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042065 PE=4 SV=1 Length = 950
Score = 204 bits (519), Expect = 2e-51 Identities = 104/159 (65%), Positives = 124/159 (77%) Frame = +2
Query: 11 VDEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSHLPKMDH 190 ++E+K+IMQSLSKD++TVKKLVDD VT LS S+RPHDAVSALGPMY VH +HLPKM Sbjct: 304 INEQKSIMQSLSKDVSTVKKLVDDSVTCQLSSSLRPHDAVSALGPMYDVHDKNHLPKMQA 363
Query: 191 CYQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFKD 370 C I KLL+ + KK+EM VH MQRV + I+D R Q F+EA++RQ+ +F D Sbjct: 364 CDHSISKLLDFCIDKKNEMNNFVHNYMQRVTYVSYIIKDTRYQFPVFKEAMARQDTLFAD 423
Query: 371 LKLVRQIGPAYRACLAEVVRRKASMKLYMGQAGQLAERM 487 LKLVR IGPAYRACLAEVVRRKASMKLYMG AGQLAE++ Sbjct: 424 LKLVRGIGPAYRACLAEVVRRKASMKLYMGMAGQLAEKL 462
>tr|A7PFL5|A7PFL5_VITVI Chromosome chr11 scaffold_14, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017147001 PE=4 SV=1 Length = 1137
Score = 201 bits (512), Expect = 1e-50 Identities = 103/159 (64%), Positives = 123/159 (77%) Frame = +2
Query: 11 VDEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSHLPKMDH 190 ++E+K+IMQSLSKD++TVKKLV D VT LS S+RPHDAVSALGPMY VH +HLPKM Sbjct: 304 INEQKSIMQSLSKDVSTVKKLVHDSVTCQLSSSLRPHDAVSALGPMYDVHDKNHLPKMQA 363
Query: 191 CYQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFKD 370 C I KLL+ + KK+EM VH MQRV + I+D R Q F+EA++RQ+ +F D Sbjct: 364 CDHSISKLLDFCIDKKNEMNNFVHNYMQRVTYVSYIIKDTRYQFPVFKEAMARQDTLFAD 423
Query: 371 LKLVRQIGPAYRACLAEVVRRKASMKLYMGQAGQLAERM 487 LKLVR IGPAYRACLAEVVRRKASMKLYMG AGQLAE++ Sbjct: 424 LKLVRGIGPAYRACLAEVVRRKASMKLYMGMAGQLAEKL 462
>tr|A2X1L8|A2X1L8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06096 PE=4 SV=1 Length = 1119
Score = 169 bits (428), Expect = 6e-41 Identities = 86/159 (54%), Positives = 112/159 (70%) Frame = +2
Query: 11 VDEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSHLPKMDH 190 + ++K IMQSLSKD+ T KKLVDDC LS S+RPHDAVSA+G +Y VH +LP + + Sbjct: 315 IGDQKIIMQSLSKDVTTSKKLVDDCSNCQLSASLRPHDAVSAVGRIYEVHEKDNLPSIHN 374
Query: 191 CYQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFKD 370 + KLLE AKK+EM VH MQRV + Q I+++ N+L AF+E + Q+++F Sbjct: 375 IDRMFTKLLEKCKAKKNEMNTLVHVSMQRVKSAQIVIKEMMNELHAFQEVMGHQDKIFDS 434
Query: 371 LKLVRQIGPAYRACLAEVVRRKASMKLYMGQAGQLAERM 487 LKL +G AYRACLAEVVRRK+S KLY G AGQLAE++ Sbjct: 435 LKLASGMGHAYRACLAEVVRRKSSFKLYTGLAGQLAEKL 473
>tr|Q6ETK7|Q6ETK7_ORYSJ Os02g0179800 protein OS=Oryza sativa subsp. japonica GN=P0544B02.28 PE=4 SV=1 Length = 1140
Score = 169 bits (427), Expect = 8e-41 Identities = 86/159 (54%), Positives = 112/159 (70%) Frame = +2
Query: 11 VDEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSHLPKMDH 190 + ++K IMQSLSKD+ T KKLVDDC LS S+RPHDAVSA+G +Y VH +LP + + Sbjct: 315 IGDQKIIMQSLSKDVTTSKKLVDDCSNCQLSASLRPHDAVSAVGRIYEVHEKDNLPSVHN 374
Query: 191 CYQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFKD 370 + KLLE AKK+EM VH MQRV + Q I+++ N+L AF+E + Q+++F Sbjct: 375 IDRLFTKLLEKCKAKKNEMNTLVHVSMQRVKSAQIVIKEMMNELHAFQEVMGHQDKIFDS 434
Query: 371 LKLVRQIGPAYRACLAEVVRRKASMKLYMGQAGQLAERM 487 LKL +G AYRACLAEVVRRK+S KLY G AGQLAE++ Sbjct: 435 LKLASGMGHAYRACLAEVVRRKSSFKLYTGLAGQLAEKL 473
>tr|A3A3S8|A3A3S8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_005450 PE=4 SV=1 Length = 1170
Score = 169 bits (427), Expect = 8e-41 Identities = 86/159 (54%), Positives = 112/159 (70%) Frame = +2
Query: 11 VDEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSHLPKMDH 190 + ++K IMQSLSKD+ T KKLVDDC LS S+RPHDAVSA+G +Y VH +LP + + Sbjct: 345 IGDQKIIMQSLSKDVTTSKKLVDDCSNCQLSASLRPHDAVSAVGRIYEVHEKDNLPSVHN 404
Query: 191 CYQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFKD 370 + KLLE AKK+EM VH MQRV + Q I+++ N+L AF+E + Q+++F Sbjct: 405 IDRLFTKLLEKCKAKKNEMNTLVHVSMQRVKSAQIVIKEMMNELHAFQEVMGHQDKIFDS 464
Query: 371 LKLVRQIGPAYRACLAEVVRRKASMKLYMGQAGQLAERM 487 LKL +G AYRACLAEVVRRK+S KLY G AGQLAE++ Sbjct: 465 LKLASGMGHAYRACLAEVVRRKSSFKLYTGLAGQLAEKL 503
>tr|A8J9G0|A8J9G0_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_177124 PE=4 SV=1 Length = 803
Score = 66.2 bits (160), Expect = 8e-10 Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 11/171 (6%) Frame = +2
Query: 8 VVDEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSHLPKMD 187 ++DE +++Q LSKD+ TV+ LV+D + ++M + LG + Sbjct: 173 LLDEHSSMVQVLSKDLRTVRALVEDVAAEASKVAM----SADVLGQL------------- 215
Query: 188 HCYQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFK 367 QR++ QS IRD++N+LAAF E L+RQ+ F Sbjct: 216 ----------------------------QRISGQQSRIRDMKNKLAAFNEVLARQDAAFS 247
Query: 368 DLKLVRQI-----------GPAYRACLAEVVRRKASMKLYMGQAGQLAERM 487 +LK+V + G A ++ VV + +LY GQAG+LAE M Sbjct: 248 ELKVVHRCACGRRFAKTAGGGRLHATVSAVVTLTQTTQLYCGQAGRLAEHM 298
>tr|B4JGX8|B4JGX8_DROGR GH19504 OS=Drosophila grimshawi GN=GH19504 PE=4 SV=1 Length = 1292
Score = 43.9 bits (102), Expect = 0.004 Identities = 33/143 (23%), Positives = 62/143 (43%) Frame = +2
Query: 8 VVDEEKTIMQSLSKDMNTVKKLVDDCVTSSLSMSMRPHDAVSALGPMYHVHVNSHLPKMD 187 +V +++ +L ++ + L DD V L +S R V + +HL Sbjct: 373 MVQDQREQATALQQNESRALNLRDDSVLPDLCLSHRSQ---------LQVMLENHL---- 419
Query: 188 HCYQRIEKLLESFVAKKHEMGCCVHTCMQRVAALQSSIRDVRNQLAAFREALSRQEEVFK 367 RI + K E+G +HT ++R+ +++ + + N+L + L R E Sbjct: 420 ----RIREYCRCIANAKDELGRNLHTRLRRIVWIENGMSEFDNRLLFYHRCLRRAERHIS 475
Query: 368 DLKLVRQIGPAYRACLAEVVRRK 436 ++ + + Y A + EVVRRK Sbjct: 476 IIEQIHRAPSTYVAAVTEVVRRK 498
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