BP916606
Clone id YMU001_000089_E07
Library
Length 501
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000089_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGACAAGAAGACTCTACAGGCTTGTCCATCTGAAAGCTCCAATATACAGAAGTCGTTCAG
TTTTCTAGTTTTTTCAGCTTTAAGGTTGAAGTAAATCAATGACTCATCAACCCTCAACAA
AATAATAATCCCTACCTCTGTCAATTTCTCAAAGAGGTACACCCTTTGCTTGTCAAAAAA
GCACCTTCTTTCCTCAAACTTTGGATGCATTATCGCCAGAACATAAGTTTCGCAAAAAAA
CGGCGTATATTCTCATCTGCTTGGGCACGATTGCGTTCAATTCGTAACTCATGCTCACGC
TTTCTACAAGCTCTATATGCTTCAAACTGGGTTCGGCAAAGCCTTTTATTGTAGTTAGCA
TCATCTAGACACTTCAGTGACGCAGCATAGTGAGAGGCGCACATGGAGTCAGAGAGCCTC
TGATAGCCAGTCTCGGCGCCCGGATACTCCGCATGAATTGCTTCTTCAGTCTCTGCCATT
GTTCCTATGTCGTCATCGCCG
■■Homology search results ■■ -
sp_hit_id Q8SPI2
Definition sp|Q8SPI2|CHCH7_MACFA Coiled-coil-helix-coiled-coil-helix domain-containing protein 7 OS=Macaca fascicularis
Align length 45
Score (bit) 46.6
E-value 6.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916606|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_E07.
(501 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8SPI2|CHCH7_MACFA Coiled-coil-helix-coiled-coil-helix domain... 47 6e-05
sp|Q75D94|COX23_ASHGO Cytochrome c oxidase-assembly factor COX23... 43 0.001
sp|Q28GG4|CHCH7_XENTR Coiled-coil-helix-coiled-coil-helix domain... 41 0.003
sp|Q9BUK0|CHCH7_HUMAN Coiled-coil-helix-coiled-coil-helix domain... 41 0.003
sp|Q2TAP8|CHCH7_XENLA Coiled-coil-helix-coiled-coil-helix domain... 40 0.005
sp|Q6CIT9|COX23_KLULA Cytochrome c oxidase-assembly factor COX23... 39 0.013
sp|Q8K2Q5|CHCH7_MOUSE Coiled-coil-helix-coiled-coil-helix domain... 39 0.018
sp|Q6CF49|COX23_YARLI Cytochrome c oxidase-assembly factor COX23... 37 0.039
sp|Q6FQX5|COX23_CANGA Cytochrome c oxidase-assembly factor COX23... 35 0.15
sp|Q7S4H6|COX23_NEUCR Cytochrome c oxidase-assembly factor cox-2... 35 0.25
sp|P38824|COX23_YEAST Cytochrome c oxidase-assembly factor COX23... 34 0.33
sp|Q10313|YD61_SCHPO Uncharacterized protein C17G8.01c OS=Schizo... 33 0.74
sp|A1CH57|COX23_ASPCL Cytochrome c oxidase-assembly factor cox23... 33 0.74
sp|Q8K0C8|COX19_MOUSE Cytochrome c oxidase assembly protein COX1... 33 0.96
sp|A1JIH8|RL10_YERE8 50S ribosomal protein L10 OS=Yersinia enter... 32 1.3
sp|Q5K723|COX23_CRYNE Cytochrome c oxidase-assembly factor COX23... 32 1.6
sp|A8E4L1|COX19_BOVIN Cytochrome c oxidase assembly protein COX1... 32 1.6
sp|A5EQB7|HUTH_BRASB Histidine ammonia-lyase OS=Bradyrhizobium s... 31 2.8
sp|Q5A884|COX23_CANAL Cytochrome c oxidase-assembly factor COX23... 31 2.8
sp|Q66FQ4|RL10_YERPS 50S ribosomal protein L10 OS=Yersinia pseud... 31 3.7
sp|A4TS31|RL10_YERPP 50S ribosomal protein L10 OS=Yersinia pesti... 31 3.7
sp|Q1CN80|RL10_YERPN 50S ribosomal protein L10 OS=Yersinia pesti... 31 3.7
sp|Q8ZAP3|RL10_YERPE 50S ribosomal protein L10 OS=Yersinia pesti... 31 3.7
sp|Q1C1T9|RL10_YERPA 50S ribosomal protein L10 OS=Yersinia pesti... 31 3.7
sp|A7FNI5|RL10_YERP3 50S ribosomal protein L10 OS=Yersinia pseud... 31 3.7
sp|A4FUH0|RL22L_BOVIN 60S ribosomal protein L22-like 1 OS=Bos ta... 30 4.8
sp|Q2NWR8|RL10_SODGM 50S ribosomal protein L10 OS=Sodalis glossi... 30 4.8
sp|A8G8E5|RL10_SERP5 50S ribosomal protein L10 OS=Serratia prote... 30 4.8
sp|Q48NT4|OSTA_PSE14 LPS-assembly protein OS=Pseudomonas syringa... 30 4.8
sp|Q208S3|COX23_PARBR Cytochrome c oxidase-assembly factor COX23... 30 4.8

>sp|Q8SPI2|CHCH7_MACFA Coiled-coil-helix-coiled-coil-helix
domain-containing protein 7 OS=Macaca fascicularis
GN=CHCHD7 PE=3 SV=1
Length = 85

Score = 46.6 bits (109), Expect = 6e-05
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -2

Query: 401 CASHYAASLKCLDDANYNKRLCRTQFEAYRACRKREHELRIERNR 267
C S AS +CLD+ NY+K C T F Y+ CRK H + ++R R
Sbjct: 16 CLSESDASTRCLDENNYDKERCSTYFLKYKNCRKFWHSIMMQRRR 60


>sp|Q75D94|COX23_ASHGO Cytochrome c oxidase-assembly factor COX23,
mitochondrial OS=Ashbya gossypii GN=COX23 PE=3 SV=1
Length = 111

Score = 42.7 bits (99), Expect = 0.001
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = -2

Query: 452 AEYPGAETGYQRLSDSMCASHYAASLKCLDDANYNKRLCRTQFEAYRACRKR 297
A Y A G + D C S+KCL+ NY++ LCR F+AYR C+K+
Sbjct: 48 ARYRXAAKGPSQYXDP-CQESANMSMKCLERNNYDRDLCREYFDAYRECKKQ 98


>sp|Q28GG4|CHCH7_XENTR Coiled-coil-helix-coiled-coil-helix
domain-containing protein 7 OS=Xenopus tropicalis
GN=chchd7 PE=3 SV=1
Length = 85

Score = 41.2 bits (95), Expect = 0.003
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -2

Query: 416 LSDSMCASHYAASLKCLDDANYNKRLCRTQFEAYRACRKREHELRIERNR 267
L + C AS KC+DD Y K LC F Y+ CRK + + + R R
Sbjct: 11 LDSNPCLEETDASTKCMDDNRYEKDLCTPYFVKYKNCRKFWNGIMVTRRR 60


>sp|Q9BUK0|CHCH7_HUMAN Coiled-coil-helix-coiled-coil-helix
domain-containing protein 7 OS=Homo sapiens GN=CHCHD7
PE=2 SV=1
Length = 85

Score = 41.2 bits (95), Expect = 0.003
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = -2

Query: 422 QRLSD---SMCASHYAASLKCLDDANYNKRLCRTQFEAYRACRKREHELRIERNR 267
QRL D + C S AS +CLD+ NY++ C T F Y+ CR+ + + ++R +
Sbjct: 6 QRLRDPDINPCLSESDASTRCLDENNYDRERCSTYFLRYKNCRRFWNSIVMQRRK 60


>sp|Q2TAP8|CHCH7_XENLA Coiled-coil-helix-coiled-coil-helix
domain-containing protein 7 OS=Xenopus laevis GN=chchd7
PE=3 SV=1
Length = 84

Score = 40.4 bits (93), Expect = 0.005
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = -2

Query: 416 LSDSMCASHYAASLKCLDDANYNKRLCRTQFEAYRACRKREHELRIERNR 267
L + C AS KC+D+ Y K LC + F Y+ CRK + + I R R
Sbjct: 10 LDSNPCLEETDASTKCMDENQYQKDLCTSYFIKYKNCRKFWNGIMITRRR 59


>sp|Q6CIT9|COX23_KLULA Cytochrome c oxidase-assembly factor COX23,
mitochondrial OS=Kluyveromyces lactis GN=COX23 PE=3 SV=1
Length = 122

Score = 38.9 bits (89), Expect = 0.013
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -2

Query: 401 CASHYAASLKCLDDANYNKRLCRTQFEAYRACRKREHELRIER 273
C S KCL+ NY++ LC F+AYR C+K+ + R E+
Sbjct: 75 CQESSKMSFKCLELNNYDRDLCHDYFDAYRECKKQWLKARREK 117


>sp|Q8K2Q5|CHCH7_MOUSE Coiled-coil-helix-coiled-coil-helix
domain-containing protein 7 OS=Mus musculus GN=Chchd7
PE=2 SV=1
Length = 85

Score = 38.5 bits (88), Expect = 0.018
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -2

Query: 401 CASHYAASLKCLDDANYNKRLCRTQFEAYRACRKREHELRIERNR 267
C S AS +C+D+ NY++ C + F Y+ CR+ + + I+R +
Sbjct: 16 CLSESDASTRCMDENNYDRERCSSYFLKYKNCRRFWNSVMIQRRQ 60


>sp|Q6CF49|COX23_YARLI Cytochrome c oxidase-assembly factor COX23,
mitochondrial OS=Yarrowia lipolytica GN=COX23 PE=3 SV=1
Length = 164

Score = 37.4 bits (85), Expect = 0.039
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2

Query: 401 CASHYAASLKCLDDANYNKRLCRTQFEAYRACRK 300
CA SL CL+ NY K +C F+ YR C+K
Sbjct: 73 CAEASKMSLNCLERNNYKKAMCEEYFQIYRDCKK 106


>sp|Q6FQX5|COX23_CANGA Cytochrome c oxidase-assembly factor COX23,
mitochondrial OS=Candida glabrata GN=COX23 PE=3 SV=1
Length = 111

Score = 35.4 bits (80), Expect = 0.15
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -2

Query: 401 CASHYAASLKCLDDANYNKRLCRTQFEAYRACRKREHELR 282
C S KCL+ +Y++ C+ F+AYR C+K+ E R
Sbjct: 64 CQESAKMSFKCLELNDYDRDQCKEYFDAYRECKKQWLEAR 103


>sp|Q7S4H6|COX23_NEUCR Cytochrome c oxidase-assembly factor cox-23,
mitochondrial OS=Neurospora crassa GN=cox-23 PE=3 SV=1
Length = 82

Score = 34.7 bits (78), Expect = 0.25
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2

Query: 401 CASHYAASLKCLDDANYNKRLCRTQFEAYRACRKREHELRIERNR 267
C S++CL ++ +C FEAYR C+K+ E R E+ R
Sbjct: 32 CQEAAQRSIRCLHRNQGDRTMCSDYFEAYRECKKQWIERRREQKR 76


tr_hit_id A9T455
Definition tr|A9T455|A9T455_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 57
Score (bit) 80.9
E-value 3.0e-14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916606|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_E07.
(501 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9T455|A9T455_PHYPA Predicted protein OS=Physcomitrella paten... 81 3e-14
tr|B8LQJ9|B8LQJ9_PICSI Putative uncharacterized protein OS=Picea... 77 6e-13
tr|B8AVZ2|B8AVZ2_ORYSI Putative uncharacterized protein OS=Oryza... 62 1e-08
tr|Q8VZ44|Q8VZ44_ARATH Putative uncharacterized protein At1g0216... 62 1e-08
tr|Q0J999|Q0J999_ORYSJ Os04g0665000 protein (Fragment) OS=Oryza ... 61 3e-08
tr|A7PK67|A7PK67_VITVI Chromosome chr15 scaffold_19, whole genom... 61 3e-08
tr|A3AGI2|A3AGI2_ORYSJ Putative uncharacterized protein OS=Oryza... 50 5e-05
tr|A8MQS6|A8MQS6_ARATH Uncharacterized protein At1g02160.2 OS=Ar... 50 6e-05
tr|A7SV92|A7SV92_NEMVE Predicted protein OS=Nematostella vectens... 47 7e-04
tr|A8WG39|A8WG39_DANRE Chchd7 protein OS=Danio rerio GN=chchd7 P... 44 0.006
tr|B5X6N4|B5X6N4_SALSA Coiled-coil-helix-coiled-coil-helix domai... 43 0.009
tr|A9UXM8|A9UXM8_MONBE Predicted protein OS=Monosiga brevicollis... 43 0.009
tr|B5DDX9|B5DDX9_XENTR Chchd7 protein OS=Xenopus tropicalis GN=c... 41 0.027
tr|A8K223|A8K223_HUMAN cDNA FLJ76528, highly similar to Homo sap... 41 0.027
tr|A7TNB1|A7TNB1_VANPO Putative uncharacterized protein OS=Vande... 40 0.079
tr|Q8BT77|Q8BT77_MOUSE Putative uncharacterized protein (Fragmen... 39 0.18
tr|B1AXC9|B1AXC9_MOUSE Coiled-coil-helix-coiled-coil-helix domai... 39 0.18
tr|B1AXC8|B1AXC8_MOUSE Coiled-coil-helix-coiled-coil-helix domai... 39 0.18
tr|Q17Q91|Q17Q91_BOVIN CHCHD7 protein OS=Bos taurus GN=CHCHD7 PE... 38 0.23
tr|B0CUI7|B0CUI7_LACBS Predicted protein OS=Laccaria bicolor (st... 37 0.67
tr|B1AXC7|B1AXC7_MOUSE Coiled-coil-helix-coiled-coil-helix domai... 36 0.88
tr|Q3TFT3|Q3TFT3_MOUSE Coiled-coil-helix-coiled-coil-helix domai... 36 1.1
tr|B1AXC5|B1AXC5_MOUSE Coiled-coil-helix-coiled-coil-helix domai... 36 1.1
tr|B7PTD7|B7PTD7_IXOSC Coiled-coil-helix-coiled-coil-helix domai... 36 1.1
tr|A5KA68|A5KA68_PLAVI Putative uncharacterized protein OS=Plasm... 35 1.5
tr|A1L2T0|A1L2T0_XENLA LOC100036941 protein OS=Xenopus laevis GN... 35 2.0
tr|B4IAE9|B4IAE9_DROSE GM22317 OS=Drosophila sechellia GN=GM2231... 35 2.0
tr|Q0CLH5|Q0CLH5_ASPTN Predicted protein OS=Aspergillus terreus ... 35 2.6
tr|Q6Z4D8|Q6Z4D8_ORYSJ Putative uncharacterized protein OSJNBb00... 34 3.3
tr|A2YIZ0|A2YIZ0_ORYSI Putative uncharacterized protein OS=Oryza... 34 3.3

>tr|A9T455|A9T455_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_140043 PE=4 SV=1
Length = 70

Score = 80.9 bits (198), Expect = 3e-14
Identities = 36/57 (63%), Positives = 45/57 (78%)
Frame = -2

Query: 437 AETGYQRLSDSMCASHYAASLKCLDDANYNKRLCRTQFEAYRACRKREHELRIERNR 267
A TG +LSDSMCA YAASLKCLD+ANY+K C+ F+AY+ C+K+E ELR+E NR
Sbjct: 8 ARTGPLKLSDSMCAPQYAASLKCLDEANYDKSKCQDHFDAYKECKKQERELRLEANR 64


>tr|B8LQJ9|B8LQJ9_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 76

Score = 76.6 bits (187), Expect = 6e-13
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = -2

Query: 446 YPGAETGYQRLSDSMCASHYAASLKCLDDANYNKRLCRTQFEAYRACRKREHELRIERNR 267
YP A +LSDSMC + YAASLKCLDD+NY+K C+ QF Y+ CRK+E E+R+E+NR
Sbjct: 15 YPSAS----KLSDSMCYAAYAASLKCLDDSNYDKSKCQDQFYTYKECRKKEREIRLEQNR 70


>tr|B8AVZ2|B8AVZ2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_17810 PE=4 SV=1
Length = 85

Score = 62.4 bits (150), Expect = 1e-08
Identities = 32/73 (43%), Positives = 45/73 (61%)
Frame = -2

Query: 476 AETEEAIHAEYPGAETGYQRLSDSMCASHYAASLKCLDDANYNKRLCRTQFEAYRACRKR 297
A + A YP A R++DS C Y ASLKCL+ AN +K C+ QF+ Y+ C+KR
Sbjct: 15 ASSPAAASPPYPSAA----RIADSDCFPQYTASLKCLE-ANQDKSKCQQQFDDYKECKKR 69

Query: 296 EHELRIERNRAQA 258
E E R+ERN+ ++
Sbjct: 70 EREARLERNKGRS 82


>tr|Q8VZ44|Q8VZ44_ARATH Putative uncharacterized protein At1g02160
OS=Arabidopsis thaliana GN=At1g02160 PE=2 SV=1
Length = 71

Score = 62.0 bits (149), Expect = 1e-08
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = -2

Query: 452 AEYPGAETGYQRLSDSMCASHYAASLKCLDDANYNKRLCRTQFEAYRACRKREHELRIER 273
A YP A R+SDS C Y+ASLKCL++ +K C+ F+ Y+ C+K+E E R+ER
Sbjct: 8 AAYPSAA----RISDSPCYLQYSASLKCLEEFGSDKSKCQDHFDVYKECKKKEREARLER 63

Query: 272 NRAQA 258
N+ ++
Sbjct: 64 NKTRS 68


>tr|Q0J999|Q0J999_ORYSJ Os04g0665000 protein (Fragment) OS=Oryza
sativa subsp. japonica GN=Os04g0665000 PE=4 SV=1
Length = 98

Score = 61.2 bits (147), Expect = 3e-08
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = -2

Query: 446 YPGAETGYQRLSDSMCASHYAASLKCLDDANYNKRLCRTQFEAYRACRKREHELRIERNR 267
YP A R++DS C Y ASLKCL+ AN +K C+ QF+ Y+ C+KRE E R+ERN+
Sbjct: 38 YPSAA----RIADSDCFPQYTASLKCLE-ANQDKSKCQQQFDDYKECKKREREARLERNK 92

Query: 266 AQA 258
++
Sbjct: 93 GRS 95


>tr|A7PK67|A7PK67_VITVI Chromosome chr15 scaffold_19, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00019039001
PE=4 SV=1
Length = 70

Score = 60.8 bits (146), Expect = 3e-08
Identities = 26/51 (50%), Positives = 38/51 (74%)
Frame = -2

Query: 419 RLSDSMCASHYAASLKCLDDANYNKRLCRTQFEAYRACRKREHELRIERNR 267
R +D+MC Y+ASLKCL+ +N +K C+ QF+ Y+ C+K+E E R+ERNR
Sbjct: 15 RFADNMCYQQYSASLKCLE-SNSDKSKCQEQFDVYKECKKKEREARLERNR 64


>tr|A3AGI2|A3AGI2_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_009904 PE=4 SV=1
Length = 74

Score = 50.4 bits (119), Expect = 5e-05
Identities = 27/61 (44%), Positives = 36/61 (59%)
Frame = -2

Query: 476 AETEEAIHAEYPGAETGYQRLSDSMCASHYAASLKCLDDANYNKRLCRTQFEAYRACRKR 297
A + A YP A R++DS C Y ASLKCL+ AN +K C+ QF+ Y+ C+KR
Sbjct: 15 ASSPAAASPPYPSAA----RIADSDCFPQYTASLKCLE-ANQDKSKCQQQFDDYKECKKR 69

Query: 296 E 294
E
Sbjct: 70 E 70


>tr|A8MQS6|A8MQS6_ARATH Uncharacterized protein At1g02160.2
OS=Arabidopsis thaliana GN=At1g02160 PE=4 SV=1
Length = 91

Score = 50.1 bits (118), Expect = 6e-05
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = -2

Query: 452 AEYPGAETGYQRLSDSMCASHYAASLKCLDDANYNKRLCRTQFEAYRACRKRE 294
A YP A R+SDS C Y+ASLKCL++ +K C+ F+ Y+ C+K+E
Sbjct: 8 AAYPSAA----RISDSPCYLQYSASLKCLEEFGSDKSKCQDHFDVYKECKKKE 56


>tr|A7SV92|A7SV92_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g174742 PE=4 SV=1
Length = 77

Score = 46.6 bits (109), Expect = 7e-04
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -2

Query: 401 CASHYAASLKCLDDANYNKRLCRTQFEAYRACRKREHELRIERNR 267
C S+KCLD+ NY K C+ F+AY AC+K +E + ER R
Sbjct: 17 CQKEAKDSMKCLDENNYMKSKCQAYFDAYSACKKAWNERKAERRR 61


>tr|A8WG39|A8WG39_DANRE Chchd7 protein OS=Danio rerio GN=chchd7 PE=4
SV=1
Length = 87

Score = 43.5 bits (101), Expect = 0.006
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = -2

Query: 401 CASHYAASLKCLDDANYNKRLCRTQFEAYRACRKREHELRIERNRA 264
C S +CLD NY+K +C F Y++CRK H++ ++R R+
Sbjct: 18 CIEESDNSQRCLDAYNYDKNMCSAYFMKYKSCRKYWHDVMLQRKRS 63