BP916607 |
Clone id |
YMU001_000089_E08 |
Library |
YMU01 |
Length |
450 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000089_E08. |
Accession |
BP916607 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3810Contig1 |
Sequence |
CCGCAAGGGAGCTAAAGAAGCAGTCTTGGAGATATCACAAGAAATACAACACATGGCTCC AGCGACATGAGGAGCCCAAAGTGACAACGGATGAGTATGAGCAGGGGACATACGTCTATT TTGATTTCCATATTCTTCATGATGACTTCGGGCAAGGATGGTGTCAGCGTATCAAAACGG AGTTTACATTCGAGTACAGCTATCTAGAAGATGAGCTTGTCGTGTAGTGTACTTCTATCT TCTTGAATATGAAAGCCAACCCTTTGTAAGTTGTGTACAAAAAAAAGAGGCAGGGGGGGG CAGGTATAATAATGACAAATGTACGAATTTCCTTTGCTTCTCATATTGCTGTGTTCATCG CTCTGTAAGGAAAATCGTGACTTGTGACATGTTTGGTATCTATTTTGTTGCTGTAATGCA AGCCAAGTTGAAAGCAAGTTAAATTATTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O13870 |
Definition |
sp|O13870|NOT3_SCHPO General negative regulator of transcription subunit 3 OS=Schizosaccharomyces pombe |
Align length |
70 |
Score (bit) |
94.4 |
E-value |
2.0e-19 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SXW1 |
Definition |
tr|A9SXW1|A9SXW1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
74 |
Score (bit) |
152.0 |
E-value |
1.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916607|Adiantum capillus-veneris mRNA, clone: YMU001_000089_E08. (450 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SXW1|A9SXW1_PHYPA Predicted protein OS=Physcomitrella paten... 152 1e-35 tr|A7PW68|A7PW68_VITVI Chromosome chr8 scaffold_34, whole genome... 145 1e-33 tr|A5BTD6|A5BTD6_VITVI Putative uncharacterized protein OS=Vitis... 145 1e-33 tr|A2Q5Q7|A2Q5Q7_MEDTR Not CCR4-Not complex component, N-termina... 141 1e-32 tr|Q7XZZ2|Q7XZZ2_ORYSJ Os03g0652100 protein OS=Oryza sativa subs... 134 2e-30 tr|Q10FX7|Q10FX7_ORYSJ Not1 N-terminal domain, CCR4-Not complex ... 134 2e-30 tr|B8ANJ0|B8ANJ0_ORYSI Putative uncharacterized protein OS=Oryza... 134 2e-30 tr|A3AKY2|A3AKY2_ORYSJ Putative uncharacterized protein OS=Oryza... 134 2e-30 tr|B4FGS7|B4FGS7_MAIZE Putative uncharacterized protein OS=Zea m... 130 4e-29 tr|Q9FK48|Q9FK48_ARATH Similarity to transcription regulator OS=... 128 2e-28 tr|Q94JY7|Q94JY7_ARATH Putative uncharacterized protein MRG7.18 ... 128 2e-28 tr|Q56WI4|Q56WI4_ARATH Putative uncharacterized protein At5g1823... 128 2e-28 tr|B8CE67|B8CE67_THAPS Predicted protein (Fragment) OS=Thalassio... 121 2e-26 tr|B7FQB9|B7FQB9_PHATR Predicted protein (Fragment) OS=Phaeodact... 118 2e-25 tr|B6KJY8|B6KJY8_TOXGO NOT2/NOT3/NOT5 domain-containing protein ... 116 6e-25 tr|A8ITA7|A8ITA7_CHLRE Not-complex component (Fragment) OS=Chlam... 110 5e-23 tr|Q86JP2|Q86JP2_DICDI Similar to Mus musculus (Mouse). similar ... 107 3e-22 tr|Q55AA8|Q55AA8_DICDI NOT2/NOT3/NOT5 family protein OS=Dictyost... 105 9e-22 tr|B6K6L5|B6K6L5_SCHJP CCR4-Not complex subunit Not3/5 OS=Schizo... 99 1e-19 tr|A8Q6V8|A8Q6V8_MALGO Putative uncharacterized protein OS=Malas... 98 2e-19 tr|Q4P0G8|Q4P0G8_USTMA Putative uncharacterized protein OS=Ustil... 97 3e-19 tr|B7PMA1|B7PMA1_IXOSC Putative uncharacterized protein OS=Ixode... 97 5e-19 tr|A7SLB3|A7SLB3_NEMVE Predicted protein (Fragment) OS=Nematoste... 96 7e-19 tr|B6LC46|B6LC46_BRAFL Putative uncharacterized protein OS=Branc... 96 9e-19 tr|B6L011|B6L011_BRAFL Putative uncharacterized protein OS=Branc... 96 9e-19 tr|B4JQ13|B4JQ13_DROGR GH13624 OS=Drosophila grimshawi GN=GH1362... 96 9e-19 tr|Q9U233|Q9U233_CAEEL Protein Y56A3A.1a, partially confirmed by... 96 1e-18 tr|Q7K126|Q7K126_DROME Lethal (2) NC136 OS=Drosophila melanogast... 96 1e-18 tr|Q29K24|Q29K24_DROPS GA21070 OS=Drosophila pseudoobscura pseud... 96 1e-18 tr|Q0PDJ7|Q0PDJ7_CAEEL Protein Y56A3A.1b, confirmed by transcrip... 96 1e-18
>tr|A9SXW1|A9SXW1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_235144 PE=4 SV=1 Length = 844
Score = 152 bits (383), Expect = 1e-35 Identities = 64/74 (86%), Positives = 70/74 (94%) Frame = +3
Query: 3 ARELKKQSWRYHKKYNTWLQRHEEPKVTTDEYEQGTYVYFDFHILHDDFGQGWCQRIKTE 182 ARELKKQSWRYHKKYNTW QRHEEPK+TTDEYE GTYVYFDFH++H+D+ QGWCQRIKTE Sbjct: 771 ARELKKQSWRYHKKYNTWFQRHEEPKITTDEYETGTYVYFDFHVVHNDYQQGWCQRIKTE 830
Query: 183 FTFEYSYLEDELVV 224 FTFEY YLEDEL+V Sbjct: 831 FTFEYCYLEDELIV 844
>tr|A7PW68|A7PW68_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025492001 PE=4 SV=1 Length = 815
Score = 145 bits (366), Expect = 1e-33 Identities = 62/74 (83%), Positives = 68/74 (91%) Frame = +3
Query: 3 ARELKKQSWRYHKKYNTWLQRHEEPKVTTDEYEQGTYVYFDFHILHDDFGQGWCQRIKTE 182 A+ELKKQSWRYH+KYNTW QRHEEPKV TDE+EQGTYVYFDFHI +DD GWCQRIKTE Sbjct: 742 AKELKKQSWRYHRKYNTWFQRHEEPKVATDEFEQGTYVYFDFHIANDDLQHGWCQRIKTE 801
Query: 183 FTFEYSYLEDELVV 224 FTFEY+YLEDEL+V Sbjct: 802 FTFEYNYLEDELIV 815
>tr|A5BTD6|A5BTD6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041710 PE=4 SV=1 Length = 214
Score = 145 bits (366), Expect = 1e-33 Identities = 62/74 (83%), Positives = 68/74 (91%) Frame = +3
Query: 3 ARELKKQSWRYHKKYNTWLQRHEEPKVTTDEYEQGTYVYFDFHILHDDFGQGWCQRIKTE 182 A+ELKKQSWRYH+KYNTW QRHEEPKV TDE+EQGTYVYFDFHI +DD GWCQRIKTE Sbjct: 141 AKELKKQSWRYHRKYNTWFQRHEEPKVATDEFEQGTYVYFDFHIANDDLQHGWCQRIKTE 200
Query: 183 FTFEYSYLEDELVV 224 FTFEY+YLEDEL+V Sbjct: 201 FTFEYNYLEDELIV 214
>tr|A2Q5Q7|A2Q5Q7_MEDTR Not CCR4-Not complex component, N-terminal; tRNA-binding arm OS=Medicago truncatula GN=MtrDRAFT_AC167711g22v2 PE=4 SV=1 Length = 901
Score = 141 bits (356), Expect = 1e-32 Identities = 60/73 (82%), Positives = 66/73 (90%) Frame = +3
Query: 3 ARELKKQSWRYHKKYNTWLQRHEEPKVTTDEYEQGTYVYFDFHILHDDFGQGWCQRIKTE 182 A+ELKKQSWRYH+KYNTW QRHEEPKV TD+YEQGTYVYFDFHI +DD GWCQRIK + Sbjct: 829 AKELKKQSWRYHRKYNTWFQRHEEPKVATDDYEQGTYVYFDFHIANDDLQHGWCQRIKND 888
Query: 183 FTFEYSYLEDELV 221 FTFEY+YLEDELV Sbjct: 889 FTFEYNYLEDELV 901
>tr|Q7XZZ2|Q7XZZ2_ORYSJ Os03g0652100 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0093M23.12 PE=4 SV=1 Length = 856
Score = 134 bits (337), Expect = 2e-30 Identities = 56/74 (75%), Positives = 66/74 (89%) Frame = +3
Query: 3 ARELKKQSWRYHKKYNTWLQRHEEPKVTTDEYEQGTYVYFDFHILHDDFGQGWCQRIKTE 182 ARELKKQSWR+H+KYNTW QRH EP+VTTDEYE+G+YVYFDFH++ D G GWCQRIK + Sbjct: 780 ARELKKQSWRFHRKYNTWFQRHVEPQVTTDEYERGSYVYFDFHVIDDGTGSGWCQRIKND 839
Query: 183 FTFEYSYLEDELVV 224 FTFEY++LEDEL V Sbjct: 840 FTFEYNFLEDELSV 853
>tr|Q10FX7|Q10FX7_ORYSJ Not1 N-terminal domain, CCR4-Not complex component family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g44900 PE=4 SV=1 Length = 817
Score = 134 bits (337), Expect = 2e-30 Identities = 56/74 (75%), Positives = 66/74 (89%) Frame = +3
Query: 3 ARELKKQSWRYHKKYNTWLQRHEEPKVTTDEYEQGTYVYFDFHILHDDFGQGWCQRIKTE 182 ARELKKQSWR+H+KYNTW QRH EP+VTTDEYE+G+YVYFDFH++ D G GWCQRIK + Sbjct: 741 ARELKKQSWRFHRKYNTWFQRHVEPQVTTDEYERGSYVYFDFHVIDDGTGSGWCQRIKND 800
Query: 183 FTFEYSYLEDELVV 224 FTFEY++LEDEL V Sbjct: 801 FTFEYNFLEDELSV 814
>tr|B8ANJ0|B8ANJ0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12833 PE=4 SV=1 Length = 856
Score = 134 bits (337), Expect = 2e-30 Identities = 56/74 (75%), Positives = 66/74 (89%) Frame = +3
Query: 3 ARELKKQSWRYHKKYNTWLQRHEEPKVTTDEYEQGTYVYFDFHILHDDFGQGWCQRIKTE 182 ARELKKQSWR+H+KYNTW QRH EP+VTTDEYE+G+YVYFDFH++ D G GWCQRIK + Sbjct: 780 ARELKKQSWRFHRKYNTWFQRHVEPQVTTDEYERGSYVYFDFHVIDDGTGSGWCQRIKND 839
Query: 183 FTFEYSYLEDELVV 224 FTFEY++LEDEL V Sbjct: 840 FTFEYNFLEDELSV 853
>tr|A3AKY2|A3AKY2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_011454 PE=4 SV=1 Length = 769
Score = 134 bits (337), Expect = 2e-30 Identities = 56/74 (75%), Positives = 66/74 (89%) Frame = +3
Query: 3 ARELKKQSWRYHKKYNTWLQRHEEPKVTTDEYEQGTYVYFDFHILHDDFGQGWCQRIKTE 182 ARELKKQSWR+H+KYNTW QRH EP+VTTDEYE+G+YVYFDFH++ D G GWCQRIK + Sbjct: 693 ARELKKQSWRFHRKYNTWFQRHVEPQVTTDEYERGSYVYFDFHVIDDGTGSGWCQRIKND 752
Query: 183 FTFEYSYLEDELVV 224 FTFEY++LEDEL V Sbjct: 753 FTFEYNFLEDELSV 766
>tr|B4FGS7|B4FGS7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 151
Score = 130 bits (326), Expect = 4e-29 Identities = 56/74 (75%), Positives = 65/74 (87%) Frame = +3
Query: 3 ARELKKQSWRYHKKYNTWLQRHEEPKVTTDEYEQGTYVYFDFHILHDDFGQGWCQRIKTE 182 ARELKKQSWR+H++YNTW QRH EP+VTTDEYE+G+YVYFDFH+ D G GWCQRIK + Sbjct: 77 ARELKKQSWRFHRRYNTWFQRHVEPQVTTDEYERGSYVYFDFHVTED--GSGWCQRIKND 134
Query: 183 FTFEYSYLEDELVV 224 FTFEY+YLEDEL V Sbjct: 135 FTFEYNYLEDELSV 148
>tr|Q9FK48|Q9FK48_ARATH Similarity to transcription regulator OS=Arabidopsis thaliana PE=4 SV=1 Length = 889
Score = 128 bits (321), Expect = 2e-28 Identities = 57/75 (76%), Positives = 64/75 (85%), Gaps = 1/75 (1%) Frame = +3
Query: 3 ARELKKQSWRYHKKYNTWLQRHEEPKVTTDEYEQGTYVYFDFHILHDDFGQ-GWCQRIKT 179 A+ELKKQSWRYH+K+NTW QRH+EPK+ TDEYEQG YVYFDF D+ + GWCQRIK Sbjct: 815 AKELKKQSWRYHRKFNTWFQRHKEPKIATDEYEQGAYVYFDFQTPKDENQEGGWCQRIKN 874
Query: 180 EFTFEYSYLEDELVV 224 EFTFEYSYLEDELVV Sbjct: 875 EFTFEYSYLEDELVV 889
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