BP916609
Clone id YMU001_000089_E10
Library
Length 324
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000089_E10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTGCGAGAATTGGTAGTTGTTGCCAATGCTAAAATGCCCAAGCTTGCAACCAAACATGAT
GCCATGAGCTCTAGCTTGGGGTGCATTATGTGCTTAGTGGTGCTTAAAATGTAGAGTGTA
TGGAGCTAGTGTGTTCCTCCTTCACTTGTGCCTTTTCTTTGTGCTTAGCGTAGGCCTCTT
TATATAGGCTTGAGGGGTGTTCCTTACCCAATGGTCCTTGCAAATATCCACTGATCGTTG
TCGAAGGTCTAGATGCCTCTCTAGTAAGAGAGATAGAGATAGAGAGAAGGTAGAGATAGA
GAGAGAGGAAAGAGTGGGGTGGGG
■■Homology search results ■■ -
sp_hit_id Q9KQB8
Definition sp|Q9KQB8|ZNUC_VIBCH Zinc import ATP-binding protein znuC OS=Vibrio cholerae
Align length 55
Score (bit) 29.3
E-value 6.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916609|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_E10.
(324 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9KQB8|ZNUC_VIBCH Zinc import ATP-binding protein znuC OS=Vib... 29 6.5

>sp|Q9KQB8|ZNUC_VIBCH Zinc import ATP-binding protein znuC OS=Vibrio
cholerae GN=znuC PE=3 SV=1
Length = 262

Score = 29.3 bits (64), Expect = 6.5
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -1

Query: 255 HLDLRQRSVDICKDHWV--RNTPQAYIKRPTLSTKKRHK*RRNTLAPYTLHFKHH 97
HL + + IC H V +P++ K P+ H+ R+TLA Y H +HH
Sbjct: 182 HLVMAKTDEVICLQHHVCCSGSPESIAKHPSYLAMFGHR-SRDTLAFYQHHHEHH 235


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916609|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_E10.
(324 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******