BP916610
Clone id YMU001_000089_E11
Library
Length 508
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000089_E11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATTCGCGGCCGCGAATTCTTCCAGTTTTTTTTTTAGAGACAATTAAAAGACACTTCATAA
TGGCAATATTCTTTCAAGAAAACATACAAAATGACACCTGTTTTATATCAAAAATGGGGA
CCAAACTCTCCTTGAACTTCTCAGTAGCAGAACCCTCGCCTTATCTAACTAACTTGGCCA
CCTCTGCCCATAAACAATGGCTTTCAAGTAACCATCACAAAGCCGAATCGACCTCTTAGA
GCTTCATGCTTCTGGTTTAACAGACTACCAAGATGAATTATTTGAACTCTTGGAACAACC
CCTTCCTGAACTCCATTCCTATCTTTTTTTCCCTTTACTTTTTTCAAGGAGGGTACAATT
GAACTTTGAAACTCCACAATCTATTGGACCTGGGTACTTGCGCACCCAAACATCCAACTT
AACCACTAGGTTACAACAACCAACCCAGTTGGGTAATGTATGTATTGAGCCATGCTGTTA
CCAGTCAACATTCAAACTGGCACTTGCA
■■Homology search results ■■ -
sp_hit_id Q5ADX2
Definition sp|Q5ADX2|HIR3_CANAL Histone transcription regulator 3 homolog OS=Candida albicans
Align length 52
Score (bit) 30.4
E-value 4.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916610|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_E11.
(482 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5ADX2|HIR3_CANAL Histone transcription regulator 3 homolog O... 30 4.4
sp|Q5DU31|ICEF1_MOUSE Interactor protein for cytohesin exchange ... 29 9.8

>sp|Q5ADX2|HIR3_CANAL Histone transcription regulator 3 homolog
OS=Candida albicans GN=HIR3 PE=3 SV=1
Length = 1477

Score = 30.4 bits (67), Expect = 4.4
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +1

Query: 97 KLSLNFSVAEPSPYLTNLATSAHKQWLSSNHHKAESTS*SFMLLV*QTTKMN 252
+LSL F + E + Y+++LATS + S HH + + +L++ K N
Sbjct: 664 ELSLLFEINEEASYISSLATSIKSKSTKSYHHLTNTLIKTIILILASIQKSN 715


>sp|Q5DU31|ICEF1_MOUSE Interactor protein for cytohesin exchange
factors 1 OS=Mus musculus GN=Ipcef1 PE=2 SV=2
Length = 406

Score = 29.3 bits (64), Expect = 9.8
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 20/82 (24%)
Frame = +1

Query: 43 FFQENIQNDTCFISKMGTKLSLNFSV--------------------AEPSPYLTNLATSA 162
F EN+Q +++K+G ++ S+ A P PY + ++
Sbjct: 92 FAAENLQEMNVWLNKLGFAVTHQESITKDEECYSESEQEDPEVAVEAPPPPYASTTSSPV 151

Query: 163 HKQWLSSNHHKAESTS*SFMLL 228
QW SS+ K TS SF L
Sbjct: 152 AAQWASSSSPKRRETSCSFSSL 173


tr_hit_id B6LDX8
Definition tr|B6LDX8|B6LDX8_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length 51
Score (bit) 36.6
E-value 0.63
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916610|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_E11.
(482 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6LDX8|B6LDX8_BRAFL Putative uncharacterized protein OS=Branc... 37 0.63
tr|Q11XV2|Q11XV2_CYTH3 Putative uncharacterized protein OS=Cytop... 33 7.0

>tr|B6LDX8|B6LDX8_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_69419 PE=4 SV=1
Length = 425

Score = 36.6 bits (83), Expect = 0.63
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = -3

Query: 396 LSWMFGCASTQVQ*IVEFQSSIVPSLKKVKGKKDRNGVQEGVVPRVQIIHL 244
+ ++F A+ IV FQSS + + K + KDR G+QE V +VQII+L
Sbjct: 361 ICFLFSFAALLEYAIVNFQSSRIAAAMKREKDKDREGLQEVKVDKVQIINL 411


>tr|Q11XV2|Q11XV2_CYTH3 Putative uncharacterized protein
OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469) GN=CHU_0475 PE=4 SV=1
Length = 129

Score = 33.1 bits (74), Expect = 7.0
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +1

Query: 109 NFSVAEPSPYLTNLATSAHKQWLSSNHHKAESTS*SFMLLV*QTTKMNYLNSWNNPFLNS 288
+FSVA+P + A S+ +WL N ++AE S+++L+ K Y N N +
Sbjct: 22 SFSVAKPKRFAAAKAESSIIRWLKPNGNEAE----SYVVLIPTEIKTTYHNYMFNRLIYL 77

Query: 289 IPIFFSLYFFQGGYN 333
+P F ++ G N
Sbjct: 78 LPRFITVTLCGGLQN 92