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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916616
Clone id YMU001_000089_F05
Library
Length 564
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000089_F05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GAAGAATTCGCGGCCGCAGGAATTTATTGTGTTAATGTTTATCACATATCCATATTGCAT
GGCCTTTTATTTCGTAATCAGGGAGAGCATTAAGTTGCATTACATCACAAAGCAACCACC
TTTGCATGTCCTTCACGTGCAATTGACCAGTACATACATGACAACAAACATCAGAAGATT
TGACATAACTTCTGCACAATTTGAGCTTTTCCAGCCGAGGCATCCATTGCATGCGGATCA
ATCATCTGGAAAATAATCAGCACTCTTCTTGATAGAGCCTCCTCTTTGCAAACCGACTCA
AAGTTGCAAAACTTTCACACTTTTGAAAGCAACGCGCTCCTAATTCAGTGCACTGAACCT
TGATTCTCTGCATTGAGCAAAATCTGTGGACCAGTAATTGTACAAAGCGTCAACAGACTC
CTAACAACAAAAAGAAAAGAGCTGACTGCCATTGGAAACGGAGCTCTTATCCCTTCCCTT
CTGACACCTTACCAACCAAGCTCTGCGAGTGCTCACAGTAAAATCCAAGCCCCTGCAAAA
AGCAGAGGCTCTGACAGCAGAAAA
■■Homology search results ■■ -
sp_hit_id Q3BAH3
Definition sp|Q3BAH3|YCF2_PHAAO Protein ycf2 OS=Phalaenopsis aphrodite subsp. formosana
Align length 67
Score (bit) 31.6
E-value 2.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916616|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_F05.
         (539 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3BAH3|YCF2_PHAAO Protein ycf2 OS=Phalaenopsis aphrodite subs...    32   2.6  
sp|Q9FPT5|UBP1_ARATH Ubiquitin carboxyl-terminal hydrolase 1 OS=...    31   4.4  
sp|O65482|CRK23_ARATH Putative cysteine-rich receptor-like prote...    31   4.4  
sp|P20840|SAG1_YEAST Alpha-agglutinin OS=Saccharomyces cerevisia...    30   5.7  
sp|A1DP40|ATG2_NEOFI Autophagy-related protein 2 OS=Neosartorya ...    30   7.5  
sp|Q60528|MUC1_MESAU Mucin-1 OS=Mesocricetus auratus GN=MUC1 PE=...    30   9.8  

>sp|Q3BAH3|YCF2_PHAAO Protein ycf2 OS=Phalaenopsis aphrodite subsp.
            formosana GN=ycf2-A PE=3 SV=1
          Length = 2290

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 10/67 (14%)
 Frame = +1

Query: 130  YMTTNIRRFDITSAQFELFQPR----------HPLHADQSSGK*SALFLIEPPLCKPTQS 279
            YMTT I RFDIT  QFEL +            H LH ++S+    +L L+E  L +  + 
Sbjct: 1711 YMTTKIDRFDIT-LQFELAKAMSPCIIWIPNIHDLHVNESNY--LSLDLLENYLSRDCER 1767

Query: 280  CKTFTLL 300
            C T  +L
Sbjct: 1768 CSTGKIL 1774


>sp|Q9FPT5|UBP1_ARATH Ubiquitin carboxyl-terminal hydrolase 1
           OS=Arabidopsis thaliana GN=UBP1 PE=1 SV=2
          Length = 1083

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -3

Query: 180 LKLCRSYVKSSDVCCHVCTGQLHVKDMQRWLLCDVMQLNALPDYEIKGHAIWIC 19
           LK+ +SY     + C  C  ++HVK   RW   +     +  D     +AIW+C
Sbjct: 45  LKIIKSY---QQIKCGECNERVHVKRGSRWGASNRRDWYSSSDQNCARNAIWLC 95


>sp|O65482|CRK23_ARATH Putative cysteine-rich receptor-like protein
           kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1
          Length = 830

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 25/98 (25%), Positives = 42/98 (42%)
 Frame = +3

Query: 234 STLLDRASSLQTDSKLQNFHTFESNALLIQCTEP*FSALSKICGPVIVQSVNRLLTTKRK 413
           +T+    SS + D++  NF T  S   L+QCT        + C   + Q +N+L T K  
Sbjct: 281 ATIAAANSSKRFDARSANFTTLHSLYTLVQCTH---DLTRQDCLSCLQQIINQLPTEK-- 335

Query: 414 ELTAIGNGALIPSLLTPYQPSSASAHSKIQAPAKSRGS 527
               IG   ++PS  + ++       S +  P   + S
Sbjct: 336 ----IGGQFIVPSCSSRFELCLFYNQSAVTTPQPQQNS 369


>sp|P20840|SAG1_YEAST Alpha-agglutinin OS=Saccharomyces cerevisiae
           GN=SAG1 PE=1 SV=2
          Length = 650

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 19/74 (25%), Positives = 33/74 (44%)
 Frame = -1

Query: 539 FSAVRASAFCRGLDFTVSTRRAWLVRCQKGRDKSSVSNGSQLFSFCC*ESVDALYNYWST 360
           FS   AS+   G +FT+S    + ++       +++S      +F C  S  A Y Y +T
Sbjct: 51  FSIADASSIREGDEFTLSMPHVYRIKLLNSSQTATISLADGTEAFKCYVSQQAAYLYENT 110

Query: 359 DFAQCRESRFSALN 318
            F    ++  S+ N
Sbjct: 111 TFTCTAQNDLSSYN 124


>sp|A1DP40|ATG2_NEOFI Autophagy-related protein 2 OS=Neosartorya
           fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181)
           GN=atg2 PE=3 SV=1
          Length = 2137

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +3

Query: 366 PVIVQSVNRLLTTKRKELTAIGNGALIPSLLTPYQPSSASAHSKIQAPAKSRGSDS 533
           P+++  +N  L ++    +     A   S  TP QP S+   S+I +P   + SD+
Sbjct: 271 PIVISDINMALISEPIVFSNYSRFAPPTSPTTPVQPKSSEPSSRIPSPLPGQASDA 326


>sp|Q60528|MUC1_MESAU Mucin-1 OS=Mesocricetus auratus GN=MUC1 PE=2
           SV=1
          Length = 676

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +3

Query: 420 TAIGNGALIPSLLTPYQPSSASAHSKIQAPAKSRGSD 530
           T I NG+L+P+  +   P++++AHS   A   S  SD
Sbjct: 319 TPIHNGSLVPTTSSALVPTTSAAHSGASAMTNSSESD 355
tr_hit_id B6AEP9
Definition tr|B6AEP9|B6AEP9_9CRYT Putative uncharacterized protein OS=Cryptosporidium muris RN66
Align length 75
Score (bit) 36.2
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916616|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_F05.
         (539 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6AEP9|B6AEP9_9CRYT Putative uncharacterized protein OS=Crypt...    36   1.1  
tr|Q5CL24|Q5CL24_CRYHO Putative uncharacterized protein OS=Crypt...    35   3.3  
tr|A8ZSI1|A8ZSI1_DESOH Putative uncharacterized protein OS=Desul...    33   7.3  
tr|Q8J1P4|Q8J1P4_SACPA Alpha agglutinin (Fragment) OS=Saccharomy...    33   7.3  
tr|Q8J1P3|Q8J1P3_SACPA Alpha agglutinin (Fragment) OS=Saccharomy...    33   7.3  
tr|Q8J1P2|Q8J1P2_SACPA Alpha agglutinin (Fragment) OS=Saccharomy...    33   7.3  
tr|Q8J0C8|Q8J0C8_SACPA Alpha agglutinin (Fragment) OS=Saccharomy...    33   7.3  
tr|B5DHW3|B5DHW3_DROPS GA27723 OS=Drosophila pseudoobscura pseud...    33   9.5  
tr|B5DHW2|B5DHW2_DROPS GA27744 OS=Drosophila pseudoobscura pseud...    33   9.5  

>tr|B6AEP9|B6AEP9_9CRYT Putative uncharacterized protein
           OS=Cryptosporidium muris RN66 GN=CMU_013410 PE=4 SV=1
          Length = 270

 Score = 36.2 bits (82), Expect = 1.1
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = -3

Query: 327 CTELGARCFQKCESFATLSRFAKRRLYQEEC*LFSR*LIRMQWMPRLEKLKLCRSY--VK 154
           C+E  +RC ++CE F  LS  A                I  + +PR E  K C+ Y   K
Sbjct: 75  CSECYSRCGRQCEDFLWLSLEA----------------INFRMLPRAESQKECKLYNGKK 118

Query: 153 SSDVCCHVCTGQLHV 109
           S+ + C+   G+ HV
Sbjct: 119 STRILCYTTAGRRHV 133


>tr|Q5CL24|Q5CL24_CRYHO Putative uncharacterized protein
           OS=Cryptosporidium hominis GN=Chro.20156 PE=4 SV=1
          Length = 264

 Score = 34.7 bits (78), Expect = 3.3
 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
 Frame = -3

Query: 327 CTELGARCFQKCESFATLSRFAKRRLYQEEC*LFSR*LIRMQWMPRLEKLKLCR--SYVK 154
           C+E  +RC ++CE F  LS  A                +  + +PR E  K C+  S  K
Sbjct: 77  CSECYSRCGRQCEDFLWLSLEA----------------VNFRMLPRAESQKECKLPSGKK 120

Query: 153 SSDVCCHVCTGQLHVKDMQRWLLCDVMQLNALPDYE 46
           SS + C    G+ H+   ++  + + M ++   D E
Sbjct: 121 SSRILCFTTAGRRHIDPTEQ--MIETMSISNPEDIE 154


>tr|A8ZSI1|A8ZSI1_DESOH Putative uncharacterized protein
           OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3)
           GN=Dole_1914 PE=4 SV=1
          Length = 58

 Score = 33.5 bits (75), Expect = 7.3
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 144 VCCHVCTGQLHVKDMQRWLLCDVMQLNALPDYEIK 40
           + C  C G +H  D + WL+CD  +L     YEI+
Sbjct: 11  LACPKCKGDIHTDDAENWLICDACRLK----YEIR 41


>tr|Q8J1P4|Q8J1P4_SACPA Alpha agglutinin (Fragment) OS=Saccharomyces
           paradoxus GN=SAG1 PE=4 SV=1
          Length = 576

 Score = 33.5 bits (75), Expect = 7.3
 Identities = 20/74 (27%), Positives = 34/74 (45%)
 Frame = -1

Query: 539 FSAVRASAFCRGLDFTVSTRRAWLVRCQKGRDKSSVSNGSQLFSFCC*ESVDALYNYWST 360
           F+   AS+   G DFT+S    + ++      K+++S      +F C  S  A Y Y +T
Sbjct: 51  FTIADASSIREGDDFTLSMPHVYRIKLSDSSQKTTISLRDGTEAFKCYVSQQAAYLYENT 110

Query: 359 DFAQCRESRFSALN 318
            F    ++  S+ N
Sbjct: 111 TFTCTAQTNLSSYN 124


>tr|Q8J1P3|Q8J1P3_SACPA Alpha agglutinin (Fragment) OS=Saccharomyces
           paradoxus GN=SAG1 PE=4 SV=1
          Length = 585

 Score = 33.5 bits (75), Expect = 7.3
 Identities = 20/74 (27%), Positives = 34/74 (45%)
 Frame = -1

Query: 539 FSAVRASAFCRGLDFTVSTRRAWLVRCQKGRDKSSVSNGSQLFSFCC*ESVDALYNYWST 360
           F+   AS+   G DFT+S    + ++      K+++S      +F C  S  A Y Y +T
Sbjct: 51  FTIADASSIREGDDFTLSMPHVYRIKLSDSSQKTTISLRDGTEAFKCYVSQQAAYLYENT 110

Query: 359 DFAQCRESRFSALN 318
            F    ++  S+ N
Sbjct: 111 TFTCTAQTNLSSYN 124


>tr|Q8J1P2|Q8J1P2_SACPA Alpha agglutinin (Fragment) OS=Saccharomyces
           paradoxus GN=SAG1 PE=4 SV=1
          Length = 601

 Score = 33.5 bits (75), Expect = 7.3
 Identities = 20/74 (27%), Positives = 34/74 (45%)
 Frame = -1

Query: 539 FSAVRASAFCRGLDFTVSTRRAWLVRCQKGRDKSSVSNGSQLFSFCC*ESVDALYNYWST 360
           F+   AS+   G DFT+S    + ++      K+++S      +F C  S  A Y Y +T
Sbjct: 51  FTIADASSIREGDDFTLSMPHVYRIKLSDSSQKTTISLRDGTEAFKCYVSQQAAYLYENT 110

Query: 359 DFAQCRESRFSALN 318
            F    ++  S+ N
Sbjct: 111 TFTCTAQTNLSSYN 124


>tr|Q8J0C8|Q8J0C8_SACPA Alpha agglutinin (Fragment) OS=Saccharomyces
           paradoxus GN=SAG1 PE=4 SV=1
          Length = 598

 Score = 33.5 bits (75), Expect = 7.3
 Identities = 20/74 (27%), Positives = 34/74 (45%)
 Frame = -1

Query: 539 FSAVRASAFCRGLDFTVSTRRAWLVRCQKGRDKSSVSNGSQLFSFCC*ESVDALYNYWST 360
           F+   AS+   G DFT+S    + ++      K+++S      +F C  S  A Y Y +T
Sbjct: 51  FTIADASSIREGDDFTLSMPHVYRIKLSDSSQKTTISLRDGTEAFKCYVSQQAAYLYENT 110

Query: 359 DFAQCRESRFSALN 318
            F    ++  S+ N
Sbjct: 111 TFTCTAQTNLSSYN 124


>tr|B5DHW3|B5DHW3_DROPS GA27723 OS=Drosophila pseudoobscura
           pseudoobscura GN=GA27723 PE=4 SV=1
          Length = 169

 Score = 33.1 bits (74), Expect = 9.5
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +2

Query: 338 ILCIEQNLWTSNCTKRQQTPNNKKKRADCHWKRSSYPFPSDTLPTKL-CECSQ*NPSPCK 514
           +LC EQ+   S       + ++     +C W R S P  + + P K  CE  +   S CK
Sbjct: 71  LLCTEQDAIASTTASAVVSTDSSLDEEECFWTRKSEPSCAKSKPKKASCEKRRRKKSACK 130

Query: 515 KQR 523
           K++
Sbjct: 131 KRK 133


>tr|B5DHW2|B5DHW2_DROPS GA27744 OS=Drosophila pseudoobscura
           pseudoobscura GN=GA27744 PE=4 SV=1
          Length = 162

 Score = 33.1 bits (74), Expect = 9.5
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +2

Query: 338 ILCIEQNLWTSNCTKRQQTPNNKKKRADCHWKRSSYPFPSDTLPTKL-CECSQ*NPSPCK 514
           +LC EQ+   S       + ++     +C W R S P  + + P K  CE  +   S CK
Sbjct: 64  LLCTEQDAIASTTASAVVSTDSSLDEEECFWTRKSEPSCAKSKPKKASCEKRRRKKSACK 123

Query: 515 KQR 523
           K++
Sbjct: 124 KRK 126