BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916624|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_G02.
         (515 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3A668|RIBB_PELCD 3,4-dihydroxy-2-butanone 4-phosphate syntha...    31   3.0  
sp|Q5DU31|ICEF1_MOUSE Interactor protein for cytohesin exchange ...    31   3.0  
sp|P33287|PDC_NEUCR Pyruvate decarboxylase OS=Neurospora crassa ...    30   5.1  

>sp|Q3A668|RIBB_PELCD 3,4-dihydroxy-2-butanone 4-phosphate synthase
           OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
           GN=ribB PE=3 SV=1
          Length = 217

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
 Frame = +3

Query: 18  FKPPLKRVLLLLFCSSSPKNVPLLVQESDR-----MLYASEVIHIIQMLPIFEKL*TQIC 182
           F  PL+RV L +      + V LLV + +R     +++ +E I   QM  +  +    +C
Sbjct: 9   FGTPLERVHLAIDRLRQGRGV-LLVDDENRENEGDLIFPAETITPAQMAMMIRECSGIVC 67

Query: 183 FS-TIIRWSSLSMPSPPLVETVKSPLFSSW*ASTLAIQ-RQGSTEDYFSLENVTS---SA 347
              T  +   L +P     + V     ++  A TL+I+ RQG T    + + VT+   + 
Sbjct: 68  LCLTEDKLKQLELP-----QMVSDNTSANQTAFTLSIEARQGVTTGVSAADRVTTIRTAV 122

Query: 348 PSDCMPDELLRKSCYF 395
             DC PD+L R    F
Sbjct: 123 ADDCRPDDLARPGHVF 138


>sp|Q5DU31|ICEF1_MOUSE Interactor protein for cytohesin exchange
           factors 1 OS=Mus musculus GN=Ipcef1 PE=2 SV=2
          Length = 406

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 18/49 (36%), Positives = 29/49 (59%)
 Frame = +3

Query: 207 SLSMPSPPLVETVKSPLFSSW*ASTLAIQRQGSTEDYFSLENVTSSAPS 353
           ++  P PP   T  SP+ + W AS+ + +R+ ++  + SLEN T  APS
Sbjct: 135 AVEAPPPPYASTTSSPVAAQW-ASSSSPKRRETSCSFSSLEN-TVKAPS 181


>sp|P33287|PDC_NEUCR Pyruvate decarboxylase OS=Neurospora crassa
           GN=cfp PE=1 SV=1
          Length = 570

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +3

Query: 75  NVPLLVQESDRMLYASEVIHIIQMLPIFEKL*TQICF--STIIRWSSLSMPSPPLVETVK 248
           N+PL+  + D + +       ++M      L TQ+ F  ST+I +  L  P PP V T +
Sbjct: 306 NIPLMTVDMDHVTFPGAHFSRVRMCEFLSHLATQVTFNDSTMIEYKRLK-PDPPHVHTAE 364

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916624|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_G02.
         (515 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A0LNP0|A0LNP0_SYNFM DEAD/DEAH box helicase domain protein OS=...    34   4.9  
tr|A6BYS7|A6BYS7_9PLAN Serine/threonine kinase Pkn10 OS=Planctom...    34   4.9  

>tr|A0LNP0|A0LNP0_SYNFM DEAD/DEAH box helicase domain protein
           OS=Syntrophobacter fumaroxidans (strain DSM 10017 /
           MPOB) GN=Sfum_3369 PE=4 SV=1
          Length = 843

 Score = 33.9 bits (76), Expect = 4.9
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +1

Query: 148 YPFLRNYEHKFALAQ*FGGAHFPCLVPHWLKLLK 249
           +PFLRN++H   L +   GAH    +PHW  LL+
Sbjct: 271 FPFLRNHQHLSILRETAVGAHHGGQLPHWKLLLE 304


>tr|A6BYS7|A6BYS7_9PLAN Serine/threonine kinase Pkn10
           OS=Planctomyces maris DSM 8797 GN=PM8797T_27879 PE=4
           SV=1
          Length = 1332

 Score = 33.9 bits (76), Expect = 4.9
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = -3

Query: 138 LYVSLHLHKASYLI---PVQVRERSWDSRSKRGVAELSLVVA*KKLRW 4
           L+V L+ H+A  L+   P+ V+  +W  + K G  ELSL +  ++L W
Sbjct: 443 LHVILNDHRAQILLDGQPLDVKSGTWSGKQKAGSHELSLQIGDQRLPW 490