BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916628|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_G06.
         (560 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A6MMQ5|YCF1_DIOEL Putative membrane protein ycf1 OS=Dioscorea...    32   2.8  
sp|Q6CNM6|EME1_KLULA Crossover junction endonuclease EME1 OS=Klu...    31   3.6  
sp|A2AG58|CX023_MOUSE Uncharacterized protein CXorf23 homolog OS...    30   8.1  

>sp|A6MMQ5|YCF1_DIOEL Putative membrane protein ycf1 OS=Dioscorea
           elephantipes GN=ycf1 PE=3 SV=1
          Length = 1858

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -1

Query: 521 PTDPFKEKTIERSYGCWKFPTDPDPIKICKKVLL*RSSRAKVSNDFHKKK 372
           P    +E T E  Y CW+   DP+ I   K++ +    + K   DFH K+
Sbjct: 271 PKQEQEESTEEDPYLCWEEKEDPEKIDERKEIQVNEKEKTKNEFDFHFKE 320


>sp|Q6CNM6|EME1_KLULA Crossover junction endonuclease EME1
           OS=Kluyveromyces lactis GN=EME1 PE=3 SV=1
          Length = 690

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 25/85 (29%), Positives = 35/85 (41%)
 Frame = -2

Query: 550 TPVRSPRTSSQQTPSKKKPLKDHMVAGSFPLTQIPSKSAKKFFYEDHQGQKFQMISTRKS 371
           TP +SP  SS+ T   K PL            Q+ +  A K  Y + Q  KF    TRK 
Sbjct: 185 TPNKSP--SSRSTLPVKSPL------------QLSTTVANKRSYREVQPPKFDPYLTRKL 230

Query: 370 QKPTNLQEIS*DQAHICISKFKRKC 296
           +KP N          + ++K+   C
Sbjct: 231 KKPQNKATADVSSVALDLTKYMEDC 255


>sp|A2AG58|CX023_MOUSE Uncharacterized protein CXorf23 homolog
           OS=Mus musculus PE=2 SV=1
          Length = 752

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -1

Query: 512 PFKEKTIERSYGCWKFPTDPDPIKICKKVLL*RSSRAKVSNDFHKKKPKANKSSRNFMRP 333
           PF+EK  E S+G           +  ++    RSS  +VS D+  K  K ++S ++F   
Sbjct: 264 PFQEKKEEWSFGAQGH-------RYTEREYPERSSTTRVSYDYRHKHHKLSESEQDFPDG 316

Query: 332 SSHMHIK 312
             H H+K
Sbjct: 317 RFHKHLK 323

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916628|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_G06.
         (560 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0YCQ3|B0YCQ3_ASPFC Nonsense-mediated mRNA decay factor (Upf2...    34   4.7  
tr|B6HQG7|B6HQG7_PENCH Pc22g24220 protein OS=Penicillium chrysog...    34   6.2  
tr|A1YZN5|A1YZN5_9HERP Tegument protein UL46 OS=Duck enteritis v...    30   6.2  

>tr|B0YCQ3|B0YCQ3_ASPFC Nonsense-mediated mRNA decay factor (Upf2),
            putative OS=Aspergillus fumigatus (strain CEA10 / CBS
            144.89 / FGSC A1163) GN=AFUB_091010 PE=4 SV=1
          Length = 1112

 Score = 34.3 bits (77), Expect = 4.7
 Identities = 21/70 (30%), Positives = 36/70 (51%)
 Frame = -2

Query: 229  EDDAKPQVSCTSDRKFKGNGS*SPESYRIVTTKISSKELDSVKNSSGSIKIKGYPDAGGQ 50
            E++  P+V    DR+F+   + S ES R    K  ++ +D   +SS +I +K    A  +
Sbjct: 998  EEERDPEVEAEFDREFEKMMAESMESRRFERNKQQTRTIDLPSDSSFAIAMKSQQQADRE 1057

Query: 49   CSTIVKNVVL 20
                +KN+VL
Sbjct: 1058 EQQRIKNLVL 1067


>tr|B6HQG7|B6HQG7_PENCH Pc22g24220 protein OS=Penicillium
           chrysogenum Wisconsin 54-1255 GN=Pc22g24220 PE=4 SV=1
          Length = 487

 Score = 33.9 bits (76), Expect = 6.2
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = -2

Query: 484 HMVAGSFPLTQIPSKSAKKFFYEDHQGQKFQMISTRKSQKPTNLQ 350
           ++V GSFPL  IPS S + F  E H    F  +S ++S+ P  L+
Sbjct: 419 YLVGGSFPLFTIPSMSLRLFHLEGHISHIF--VSVQRSRLPLGLK 461


>tr|A1YZN5|A1YZN5_9HERP Tegument protein UL46 OS=Duck enteritis
           virus GN=UL46 PE=4 SV=1
          Length = 739

 Score = 30.4 bits (67), Expect(2) = 6.2
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -2

Query: 559 GNVTPVRSPRTSSQQTPSKKKPLKDHMVAGSF--PLTQIPS 443
           GNVTP+   R++ +  P  K+PLK   V  S+   LT++ S
Sbjct: 154 GNVTPILILRSTFEPKPLSKRPLKGKKVTASYLEQLTELKS 194



 Score = 21.9 bits (45), Expect(2) = 6.2
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = -1

Query: 344 FMRPSSHMHIKIQKEMLLTRLMTLSKPL--WML 252
           +MRP   M   I  ++ L  +MT +  L  W+L
Sbjct: 205 YMRPEDPMQASISTDIRLREIMTYNSILYRWIL 237