BP916636 [AcEST]

BP916636
Clone id	YMU001_000089_H02
Library	YMU01
Length	538
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000089_H02.
Accession	BP916636
Tissue type	prothallium
Developmental stage	-
Contig ID	CL4234Contig1
Sequence	ATTCGCGGCCGCGAATGTGGTGGTGGTGGTCTTCTCAAACCTGATAAAATGTGGATCTTC TTCCATCAGTTATAAAGGAGCCATAATGGCAAACTGTGAACGCTGTGGTAGCTTCGTCCG TTCCAAAAAAAAGCTTTTCTTAATAGGCAGGGAGCACAAACAGGAAATTACCCTAGCCAA CCTGTCCATTCAGTAGAAAGACCAAAAGAGAGCATGATCTGTTGATGGCAATGGAGTTGT ATTTGTATTTACTGCAAAATGCTGTCCACAAATCACAATACATCCAGCACATCTCTACCA GAGATCAGCCTGACAATGAAAGCCTTCTTTAACATGCGGGCCAGCAGCACACCTAGACAT ATTGGCCTTAAAATGAAGCACTTAAAAGCTGAAGCAAAGCCTTAAATGGAGCCCTCTGTG TTAATCCATCCGCAGCATGAAAGAGTCAACAGCTTCGTGCACGCAATGTCCTTCGTATAG GAAATCGTCAATTAACACATACACACACACGCAATCTCTCGCGCGCGCGCTCTGTCTC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P23502
Definition	sp\|P23502\|SL17_ENTHI 170 kDa surface lectin OS=Entamoeba histolytica
Align length	37
Score (bit)	31.2
E-value	3.1
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP916636\|Adiantum capillus-veneris mRNA, clone: YMU001_000089_H02. (520 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P23502\|SL17_ENTHI 170 kDa surface lectin OS=Entamoeba histoly... 31 3.1 >sp\|P23502\|SL17_ENTHI 170 kDa surface lectin OS=Entamoeba histolytica GN=CEL-170/4 PE=1 SV=2 Length = 1285 Score = 31.2 bits (69), Expect = 3.1 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -1 Query: 271 CWMY-CDLWTAFCSKYKYNSIAINRSCSLLVFLLNGQ 164 CW Y CD T FC KYK+ ++ ++ + ++ + + Sbjct: 503 CWSYTCDETTGFCKKYKHGNLCTGKTTNCQEYVCDSE 539
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A0C2C5
Definition	tr\|A0C2C5\|A0C2C5_PARTE Chromosome undetermined scaffold_144, whole genome shotgun sequence OS=Paramecium tetraurelia
Align length	57
Score (bit)	33.1
E-value	8.5
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP916636\|Adiantum capillus-veneris mRNA, clone: YMU001_000089_H02. (520 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A0C2C5\|A0C2C5_PARTE Chromosome undetermined scaffold_144, who... 33 8.5 >tr\|A0C2C5\|A0C2C5_PARTE Chromosome undetermined scaffold_144, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00034419001 PE=4 SV=1 Length = 784 Score = 33.1 bits (74), Expect = 8.5 Identities = 20/57 (35%), Positives = 32/57 (56%) Frame = +2 Query: 74 NCERCGSFVRSKKKLFLIGREHKQEITLANLSIQKDQKRASVDGNGVVFVFTAKC 244 N E V+ KL L+ +EH++EI + +LS Q +KRA V+ + +F +KC Sbjct: 201 NLEYQKKSVQRTPKLDLMCKEHEKEIIIFDLSEQQSREKRARCVECDPCIFTSLSKC 257