BP916643 |
Clone id |
YMU001_000089_H10 |
Library |
YMU01 |
Length |
451 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000089_H10. |
Accession |
BP916643 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2343Contig1 |
Sequence |
GAAAAGGCTTGTGCTAGGCATGCTCCCTGAACCGCAAGAGGATTTTGAAGAAAGACATGA TATTTTCATTCATCGGGATTATTTGCTTTCGGACTCTTTTCATGCATTTCAACATGTGAA AGCTGAGGTGCTACAGGGAGGGTTGTCTGTGGAGTTTGCCTCAGAAGAAGCAACAGGACC TGGTGTCTTACGCGAGTGGTTTTATCTTGTATGCAAAGAAATCTTTGATCCAGAGAATGC TCTTTTCCTATCGTGTCCAAATGATCCTCGAAGGGTTTTTCCAAATCCAGCTTCTAATAT GAATCCAGAACATCTCAATTTATTTCGGTTTTCTGGACAAGTAATAGCATTGGCATTGAT GCACAAGGTTCAGGTTAATGTTGTATTTTCCTCAATTTTCTTTAAGCAGTTGGCTGGACT TTCAATGTCTTGGGAGGATGTGAAGGATGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SU29 |
Definition |
sp|Q9SU29|UPL5_ARATH E3 ubiquitin-protein ligase UPL5 OS=Arabidopsis thaliana |
Align length |
149 |
Score (bit) |
176.0 |
E-value |
3.0e-44 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T0Z6 |
Definition |
tr|A9T0Z6|A9T0Z6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
150 |
Score (bit) |
214.0 |
E-value |
2.0e-54 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916643|Adiantum capillus-veneris mRNA, clone: YMU001_000089_H10. (451 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T0Z6|A9T0Z6_PHYPA Predicted protein OS=Physcomitrella paten... 214 2e-54 tr|A9TCS3|A9TCS3_PHYPA Predicted protein OS=Physcomitrella paten... 211 1e-53 tr|A7QZX3|A7QZX3_VITVI Chromosome undetermined scaffold_292, who... 196 5e-49 tr|Q2HT46|Q2HT46_MEDTR HECT; Ubiquitin OS=Medicago truncatula GN... 154 3e-36 tr|B7ZZW0|B7ZZW0_MAIZE Putative uncharacterized protein OS=Zea m... 149 7e-35 tr|Q2HT48|Q2HT48_MEDTR HECT; Ubiquitin OS=Medicago truncatula GN... 148 2e-34 tr|Q2L3D3|Q2L3D3_BRASY Polyubiquitin-like protein OS=Brachypodiu... 144 2e-33 tr|Q0J0T6|Q0J0T6_ORYSJ Os09g0484300 protein OS=Oryza sativa subs... 144 2e-33 tr|A3C031|A3C031_ORYSJ Putative uncharacterized protein OS=Oryza... 144 2e-33 tr|B8BCV1|B8BCV1_ORYSI Putative uncharacterized protein OS=Oryza... 120 4e-26 tr|Q4R928|Q4R928_MACFA Testis cDNA clone: QtsA-10844, similar to... 102 1e-20 tr|B4DTQ4|B4DTQ4_HUMAN cDNA FLJ50673, highly similar to Homo sap... 102 1e-20 tr|B4DFM6|B4DFM6_HUMAN cDNA FLJ50472, highly similar to Homo sap... 102 1e-20 tr|A8K6U5|A8K6U5_HUMAN cDNA FLJ76316, highly similar to Homo sap... 102 1e-20 tr|Q8R3G4|Q8R3G4_MOUSE Hace1 protein (Fragment) OS=Mus musculus ... 102 1e-20 tr|B7Z9X6|B7Z9X6_HUMAN cDNA, FLJ78990, highly similar to Homo sa... 99 8e-20 tr|B6M9W0|B6M9W0_BRAFL Putative uncharacterized protein OS=Branc... 98 2e-19 tr|A9UUJ4|A9UUJ4_MONBE Predicted protein OS=Monosiga brevicollis... 94 4e-18 tr|B6NR14|B6NR14_BRAFL Putative uncharacterized protein OS=Branc... 92 1e-17 tr|Q00WM5|Q00WM5_OSTTA E3 ubiquitin protein ligase UPL1 (ISS) OS... 92 1e-17 tr|A8N5V6|A8N5V6_COPC7 Putative uncharacterized protein OS=Copri... 90 6e-17 tr|A8NRA0|A8NRA0_COPC7 Putative uncharacterized protein OS=Copri... 86 7e-16 tr|Q1JTI3|Q1JTI3_TOXGO Ubiquitin-protein ligase 1, putative OS=T... 86 9e-16 tr|B6KUI7|B6KUI7_TOXGO Ubiquitin-transferase domain-containing p... 86 9e-16 tr|B0D0J1|B0D0J1_LACBS Predicted protein OS=Laccaria bicolor (st... 86 9e-16 tr|A4S6X1|A4S6X1_OSTLU Predicted protein OS=Ostreococcus lucimar... 86 1e-15 tr|A9UWD9|A9UWD9_MONBE Predicted protein (Fragment) OS=Monosiga ... 86 1e-15 tr|A0CYJ5|A0CYJ5_PARTE Chromosome undetermined scaffold_31, whol... 85 2e-15 tr|Q4RVZ2|Q4RVZ2_TETNG Chromosome 9 SCAF14991, whole genome shot... 84 3e-15 tr|Q4JG03|Q4JG03_MOUSE Mcl-1 ubiquitin ligase OS=Mus musculus GN... 84 3e-15
>tr|A9T0Z6|A9T0Z6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_138593 PE=4 SV=1 Length = 824
Score = 214 bits (545), Expect = 2e-54 Identities = 99/150 (66%), Positives = 125/150 (83%) Frame = +2
Query: 2 KRLVLGMLPEPQEDFEERHDIFIHRDYLLSDSFHAFQHVKAEVLQGGLSVEFASEEATGP 181 +RLV+ MLPEPQ+D +ER ++ + R LL++SF +V+ EVLQGG+SVEFA+EEATGP Sbjct: 445 RRLVMAMLPEPQDDHDERQEVVVKRATLLTESFEQLAYVEPEVLQGGISVEFATEEATGP 504
Query: 182 GVLREWFYLVCKEIFDPENALFLSCPNDPRRVFPNPASNMNPEHLNLFRFSGQVIALALM 361 GVLREWF ++C+EIF+P+NALFL+CPND RR FPNPAS +NP HL FRF G+VIALALM Sbjct: 505 GVLREWFSMICREIFNPQNALFLACPNDRRRFFPNPASGVNPGHLTYFRFCGRVIALALM 564
Query: 362 HKVQVNVVFSSIFFKQLAGLSMSWEDVKDA 451 H+VQ++VVF+ FFKQLAGL + WED KDA Sbjct: 565 HRVQMDVVFALSFFKQLAGLPVLWEDAKDA 594
>tr|A9TCS3|A9TCS3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_143599 PE=4 SV=1 Length = 842
Score = 211 bits (538), Expect = 1e-53 Identities = 99/150 (66%), Positives = 123/150 (82%) Frame = +2
Query: 2 KRLVLGMLPEPQEDFEERHDIFIHRDYLLSDSFHAFQHVKAEVLQGGLSVEFASEEATGP 181 +RLV+ MLPEPQ+D +ER ++ + R LL++SF +V+ EVLQGG+SVEFASEEATGP Sbjct: 464 RRLVMAMLPEPQDDHDERQEVVVKRATLLTESFEQLAYVEPEVLQGGISVEFASEEATGP 523
Query: 182 GVLREWFYLVCKEIFDPENALFLSCPNDPRRVFPNPASNMNPEHLNLFRFSGQVIALALM 361 GVLREWF ++C+EIF+P+NALFL CPND RR FPN AS +NP HL FRF G+VIALALM Sbjct: 524 GVLREWFCMICREIFNPQNALFLPCPNDRRRFFPNSASGVNPGHLTYFRFCGRVIALALM 583
Query: 362 HKVQVNVVFSSIFFKQLAGLSMSWEDVKDA 451 H+VQ++VVF+ FFKQLAGL + WED KDA Sbjct: 584 HRVQMDVVFALSFFKQLAGLPVVWEDAKDA 613
>tr|A7QZX3|A7QZX3_VITVI Chromosome undetermined scaffold_292, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010879001 PE=4 SV=1 Length = 833
Score = 196 bits (498), Expect = 5e-49 Identities = 92/150 (61%), Positives = 117/150 (78%) Frame = +2
Query: 2 KRLVLGMLPEPQEDFEERHDIFIHRDYLLSDSFHAFQHVKAEVLQGGLSVEFASEEATGP 181 + L + M PE +ED+EE H++ I R LL++SF + E L GGL +EF +EEATGP Sbjct: 454 RHLAMMMFPEVKEDYEELHEMLIDRSQLLAESFEYIARAERESLHGGLFMEFKNEEATGP 513
Query: 182 GVLREWFYLVCKEIFDPENALFLSCPNDPRRVFPNPASNMNPEHLNLFRFSGQVIALALM 361 GVLREWF+LVC+EIF+P+NALF++CPND RR FPNPAS ++P HL FRFSG+VIALALM Sbjct: 514 GVLREWFFLVCQEIFNPQNALFVACPNDRRRFFPNPASEVDPMHLQYFRFSGRVIALALM 573
Query: 362 HKVQVNVVFSSIFFKQLAGLSMSWEDVKDA 451 HKVQV VVF +FF QLAG+ +S ED++DA Sbjct: 574 HKVQVGVVFDRVFFLQLAGMDISLEDIQDA 603
>tr|Q2HT46|Q2HT46_MEDTR HECT; Ubiquitin OS=Medicago truncatula GN=MtrDRAFT_AC150798g3v2 PE=4 SV=1 Length = 826
Score = 154 bits (388), Expect = 3e-36 Identities = 76/151 (50%), Positives = 107/151 (70%), Gaps = 1/151 (0%) Frame = +2
Query: 2 KRLVLGMLPEPQEDFEERHDIFIHRDYLLSDSFHAFQHVKAEVLQGGLSVEFASEEATGP 181 + L L + P+ +++ +++ I R +L++SF KA+ LQGG+ + F +E+ATGP Sbjct: 449 RHLALMLFPDSKDEISG-YEMLIDRSQVLAESFEYMSRAKAKSLQGGIFMAFKNEKATGP 507
Query: 182 GVLREWFYLVCKEIFDPENALFLSCPNDPRRVFPNPASNMNPEHLNLFRFSGQVIALALM 361 GVLREWF LVC+EIF+P+NALF++CPND RR FPN AS +N HL F SG++IALAL Sbjct: 508 GVLREWFVLVCREIFNPKNALFVACPNDHRRFFPNAASKVNSLHLKYFIVSGRIIALALK 567
Query: 362 HKVQVNVVFSSIFFKQLAG-LSMSWEDVKDA 451 KV V +VF +FFKQLAG ++ ED++DA Sbjct: 568 KKVHVGIVFDRVFFKQLAGNYIITLEDIRDA 598
>tr|B7ZZW0|B7ZZW0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 871
Score = 149 bits (376), Expect = 7e-35 Identities = 74/150 (49%), Positives = 97/150 (64%) Frame = +2
Query: 2 KRLVLGMLPEPQEDFEERHDIFIHRDYLLSDSFHAFQHVKAEVLQGGLSVEFASEEATGP 181 + LV MLPE ++DF E H++ I R +LL +SF+ + L G L +EF +EEATGP Sbjct: 494 RSLVFMMLPEGKDDFGELHEMLIDRSHLLDESFNYIAQAEQAELHGALFMEFKNEEATGP 553
Query: 182 GVLREWFYLVCKEIFDPENALFLSCPNDPRRVFPNPASNMNPEHLNLFRFSGQVIALALM 361 GVLREWF LVC+ +F P+ LF CP D RR + N S ++P HL F F+G++I LALM Sbjct: 554 GVLREWFCLVCQALFSPKQVLFSPCPEDKRRFYLNETSAVDPLHLKYFTFAGRIIGLALM 613
Query: 362 HKVQVNVVFSSIFFKQLAGLSMSWEDVKDA 451 HKVQV VV F LAG S++ ED+ A Sbjct: 614 HKVQVGVVLDRTLFLHLAGRSITLEDISVA 643
>tr|Q2HT48|Q2HT48_MEDTR HECT; Ubiquitin OS=Medicago truncatula GN=MtrDRAFT_AC150798g1v2 PE=4 SV=1 Length = 815
Score = 148 bits (373), Expect = 2e-34 Identities = 76/151 (50%), Positives = 105/151 (69%), Gaps = 1/151 (0%) Frame = +2
Query: 2 KRLVLGMLPEPQEDFEERHDIFIHRDYLLSDSFHAFQHVKAEVLQGGLSVEFASEEATGP 181 K LV+ + P+ ++ +++ I R +L++SF + LQG L + F +E+ATGP Sbjct: 438 KHLVMMLFPDLKDKILG-YEMLIDRSQVLAESFEYISRAMPKSLQGDLFMAFKNEKATGP 496
Query: 182 GVLREWFYLVCKEIFDPENALFLSCPNDPRRVFPNPASNMNPEHLNLFRFSGQVIALALM 361 GVLREWF LVC+EIF+P NALF++CPND RR FPN AS +N HL F FSG++IALAL Sbjct: 497 GVLREWFVLVCQEIFNPRNALFVACPNDHRRFFPNTASMVNALHLKYFIFSGRIIALALK 556
Query: 362 HKVQVNVVFSSIFFKQLAG-LSMSWEDVKDA 451 KV+V +VF +FFKQLAG ++ ED++DA Sbjct: 557 KKVRVGIVFDRVFFKQLAGNYIITLEDIRDA 587
>tr|Q2L3D3|Q2L3D3_BRASY Polyubiquitin-like protein OS=Brachypodium sylvaticum GN=plp-1 PE=4 SV=1 Length = 849
Score = 144 bits (364), Expect = 2e-33 Identities = 70/150 (46%), Positives = 96/150 (64%) Frame = +2
Query: 2 KRLVLGMLPEPQEDFEERHDIFIHRDYLLSDSFHAFQHVKAEVLQGGLSVEFASEEATGP 181 + LVL + E ++D+ E H++ I R +LL +SF + L GL +EF +EEATGP Sbjct: 475 RNLVLMLFSEGKDDYGELHEMLIDRSHLLDESFEYITQARPSELHSGLFMEFKNEEATGP 534
Query: 182 GVLREWFYLVCKEIFDPENALFLSCPNDPRRVFPNPASNMNPEHLNLFRFSGQVIALALM 361 GVLREWF +VC+ +F P+ LF CPND RR + N S ++P HL F FSG++I LA+M Sbjct: 535 GVLREWFCMVCQALFSPQQVLFSPCPNDQRRFYLNGTSVVDPLHLKYFIFSGRIIGLAVM 594
Query: 362 HKVQVNVVFSSIFFKQLAGLSMSWEDVKDA 451 HKVQV +V F LAG S++ ED+ A Sbjct: 595 HKVQVGIVLDRTLFLHLAGRSITLEDIAAA 624
>tr|Q0J0T6|Q0J0T6_ORYSJ Os09g0484300 protein OS=Oryza sativa subsp. japonica GN=Os09g0484300 PE=4 SV=1 Length = 865
Score = 144 bits (364), Expect = 2e-33 Identities = 70/150 (46%), Positives = 97/150 (64%) Frame = +2
Query: 2 KRLVLGMLPEPQEDFEERHDIFIHRDYLLSDSFHAFQHVKAEVLQGGLSVEFASEEATGP 181 + LVL MLPE ++++ E H++ I R +LL +SF + L+ GL +EF +EEATGP Sbjct: 504 RNLVLMMLPEGKDEYGELHEMLIDRQHLLDESFEYIIQARPSELRSGLFMEFKNEEATGP 563
Query: 182 GVLREWFYLVCKEIFDPENALFLSCPNDPRRVFPNPASNMNPEHLNLFRFSGQVIALALM 361 GVLREWF +VC+ +F P+ LF CP+D +R F N S ++P HL F FSG++I LALM Sbjct: 564 GVLREWFCMVCQALFSPQQVLFSPCPSDRQRFFLNGTSAVDPLHLKYFIFSGRIIGLALM 623
Query: 362 HKVQVNVVFSSIFFKQLAGLSMSWEDVKDA 451 H+VQV + F LAG S+ ED+ A Sbjct: 624 HRVQVGITLDRTLFLHLAGRSIKLEDISAA 653
>tr|A3C031|A3C031_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028653 PE=4 SV=1 Length = 910
Score = 144 bits (364), Expect = 2e-33 Identities = 70/150 (46%), Positives = 97/150 (64%) Frame = +2
Query: 2 KRLVLGMLPEPQEDFEERHDIFIHRDYLLSDSFHAFQHVKAEVLQGGLSVEFASEEATGP 181 + LVL MLPE ++++ E H++ I R +LL +SF + L+ GL +EF +EEATGP Sbjct: 466 RNLVLMMLPEGKDEYGELHEMLIDRQHLLDESFEYIIQARPSELRSGLFMEFKNEEATGP 525
Query: 182 GVLREWFYLVCKEIFDPENALFLSCPNDPRRVFPNPASNMNPEHLNLFRFSGQVIALALM 361 GVLREWF +VC+ +F P+ LF CP+D +R F N S ++P HL F FSG++I LALM Sbjct: 526 GVLREWFCMVCQALFSPQQVLFSPCPSDRQRFFLNGTSAVDPLHLKYFIFSGRIIGLALM 585
Query: 362 HKVQVNVVFSSIFFKQLAGLSMSWEDVKDA 451 H+VQV + F LAG S+ ED+ A Sbjct: 586 HRVQVGITLDRTLFLHLAGRSIKLEDISAA 615
>tr|B8BCV1|B8BCV1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31825 PE=4 SV=1 Length = 867
Score = 120 bits (300), Expect = 4e-26 Identities = 62/150 (41%), Positives = 87/150 (58%) Frame = +2
Query: 2 KRLVLGMLPEPQEDFEERHDIFIHRDYLLSDSFHAFQHVKAEVLQGGLSVEFASEEATGP 181 + LVL MLPE ++++ E H++ I R +LL +SF + L+ GL +EF +EEATGP Sbjct: 505 RNLVLMMLPEGKDEYGELHEMLIDRQHLLDESFEYIIQARPSELRSGLFMEFKNEEATGP 564
Query: 182 GVLREWFYLVCKEIFDPENALFLSCPNDPRRVFPNPASNMNPEHLNLFRFSGQVIALALM 361 GVLREWF +VC+ +F P+ LF CP+D +R F N ++I LALM Sbjct: 565 GVLREWFCMVCQALFSPQQVLFSPCPSDRQRFFLN---------------GRRIIGLALM 609
Query: 362 HKVQVNVVFSSIFFKQLAGLSMSWEDVKDA 451 H+VQV + F LAG S+ ED+ A Sbjct: 610 HRVQVGITLDRTLFLHLAGRSIKLEDISAA 639
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