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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916644
Clone id YMU001_000089_H11
Library
Length 315
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000089_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCATCCATGCCATCTTCACCATAAAGGAATTGAATGACATCACCGAGAGAGTTACGGACT
GTTCCGTCATACTTTACCATAACATCCTCCATAGCTTTGACTAATCTCCTCTGAATGTAA
CCTGTTTCAGAAGTTTTTACGGCTGTATCAATAAGCCCCTCTCTACCTCCCATTGCATGA
AAGAAGAACTCCTGAGGTGTGAGCCCTCTCAGGTAGGAGTTCTCCACAAAACCACGACTT
TCTGGCCCATAATCATCCTTTGTAAAGTGTGGCAGAGTTCTATCAACAAATCCATAGGGG
ATACGTTTTCCTTCT
■■Homology search results ■■ -
sp_hit_id P18616
Definition sp|P18616|RPB1_ARATH DNA-directed RNA polymerase II subunit RPB1 OS=Arabidopsis thaliana
Align length 104
Score (bit) 209.0
E-value 3.0e-54
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916644|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_H11.
         (315 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P18616|RPB1_ARATH DNA-directed RNA polymerase II subunit RPB1...   209   3e-54
sp|P35084|RPB1_DICDI DNA-directed RNA polymerase II subunit rpb1...   202   5e-52
sp|A5DCV3|RPB1_PICGU DNA-directed RNA polymerase II subunit RPB1...   196   2e-50
sp|P04050|RPB1_YEAST DNA-directed RNA polymerase II subunit RPB1...   195   5e-50
sp|Q75A34|RPB1_ASHGO DNA-directed RNA polymerase II subunit RPB1...   195   5e-50
sp|P36594|RPB1_SCHPO DNA-directed RNA polymerase II subunit rpb1...   190   2e-48
sp|P04052|RPB1_DROME DNA-directed RNA polymerase II subunit RPB1...   185   7e-47
sp|P16356|RPB1_CAEEL DNA-directed RNA polymerase II subunit RPB1...   184   1e-46
sp|P35074|RPB1_CAEBR DNA-directed RNA polymerase II subunit RPB1...   184   1e-46
sp|P14248|RPB1_PLAFD DNA-directed RNA polymerase II subunit RPB1...   183   3e-46
sp|P08775|RPB1_MOUSE DNA-directed RNA polymerase II subunit RPB1...   182   6e-46
sp|P24928|RPB1_HUMAN DNA-directed RNA polymerase II subunit RPB1...   182   6e-46
sp|Q8SSC4|RPB1_ENCCU DNA-directed RNA polymerase II subunit RPB1...   161   1e-39
sp|P17545|RPB1B_TRYBB DNA-directed RNA polymerase II subunit RPB...   152   7e-37
sp|P17546|RPB1A_TRYBB DNA-directed RNA polymerase II subunit RPB...   152   7e-37
sp|P08968|RPC1_TRYBB DNA-directed RNA polymerase III subunit RPC...   144   1e-34
sp|O94666|RPC1_SCHPO DNA-directed RNA polymerase III subunit rpc...   144   1e-34
sp|O14802|RPC1_HUMAN DNA-directed RNA polymerase III subunit RPC...   144   1e-34
sp|Q86AQ5|RPC1_DICDI DNA-directed RNA polymerase III subunit rpc...   144   1e-34
sp|Q5ZL98|RPC1_CHICK DNA-directed RNA polymerase III subunit RPC...   144   1e-34
sp|A4IF62|RPC1_BOVIN DNA-directed RNA polymerase III subunit RPC...   144   1e-34
sp|Q6BI69|RPC1_DEBHA DNA-directed RNA polymerase III subunit RPC...   142   7e-34
sp|P31813|RPOA1_THECE DNA-directed RNA polymerase subunit A' OS=...   140   1e-33
sp|P04051|RPC1_YEAST DNA-directed RNA polymerase III subunit RPC...   139   6e-33
sp|Q58445|RPOA1_METJA DNA-directed RNA polymerase subunit A' OS=...   138   1e-32
sp|Q9HM79|RPOA1_HALSA DNA-directed RNA polymerase subunit A' OS=...   137   2e-32
sp|P11512|RPOA1_SULAC DNA-directed RNA polymerase subunit A' OS=...   134   2e-31
sp|P27625|RPC1_PLAFA DNA-directed RNA polymerase III subunit RPC...   132   7e-31
sp|Q980R2|RPOA1_SULSO DNA-directed RNA polymerase subunit A' OS=...   131   9e-31
sp|P15349|RPOA1_HALMO DNA-directed RNA polymerase subunit A' (Fr...   129   5e-30

>sp|P18616|RPB1_ARATH DNA-directed RNA polymerase II subunit RPB1
            OS=Arabidopsis thaliana GN=RPB205 PE=1 SV=2
          Length = 1840

 Score =  209 bits (532), Expect = 3e-54
 Identities = 100/104 (96%), Positives = 102/104 (98%)
 Frame = -2

Query: 314  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
            EGKRIP+GF  RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK
Sbjct: 791  EGKRIPFGFDGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 850

Query: 134  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
            TSETGYIQRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMD
Sbjct: 851  TSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD 894


>sp|P35084|RPB1_DICDI DNA-directed RNA polymerase II subunit rpb1
            OS=Dictyostelium discoideum GN=polr2a PE=2 SV=2
          Length = 1727

 Score =  202 bits (513), Expect = 5e-52
 Identities = 96/104 (92%), Positives = 99/104 (95%)
 Frame = -2

Query: 314  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
            EGKRIP+GF  RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK
Sbjct: 780  EGKRIPFGFQSRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 839

Query: 134  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
            TSETGYIQRRLVKAMEDV +KYD TVRNSLGDVIQF YGEDG+D
Sbjct: 840  TSETGYIQRRLVKAMEDVSIKYDATVRNSLGDVIQFAYGEDGID 883


>sp|A5DCV3|RPB1_PICGU DNA-directed RNA polymerase II subunit RPB1
           (Fragments) OS=Pichia guilliermondii GN=RPB1 PE=3 SV=2
          Length = 1579

 Score =  196 bits (499), Expect = 2e-50
 Identities = 90/104 (86%), Positives = 99/104 (95%)
 Frame = -2

Query: 314 EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
           EGKRIP+GF DR+LPHFTKDDY PES+GFVENSYLRGLTPQEFFFHAM GREGLIDTAVK
Sbjct: 603 EGKRIPFGFADRSLPHFTKDDYSPESKGFVENSYLRGLTPQEFFFHAMAGREGLIDTAVK 662

Query: 134 TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
           T+ETGYIQRRLVKA+ED+MV YDGT RNSLGD+IQF+YGEDG+D
Sbjct: 663 TAETGYIQRRLVKALEDIMVHYDGTTRNSLGDIIQFVYGEDGVD 706


>sp|P04050|RPB1_YEAST DNA-directed RNA polymerase II subunit RPB1
            OS=Saccharomyces cerevisiae GN=RPB1 PE=1 SV=2
          Length = 1733

 Score =  195 bits (496), Expect = 5e-50
 Identities = 91/104 (87%), Positives = 99/104 (95%)
 Frame = -2

Query: 314  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
            EGKRI +GFVDRTLPHF+KDDY PES+GFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK
Sbjct: 771  EGKRIAFGFVDRTLPHFSKDDYSPESKGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 830

Query: 134  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
            T+ETGYIQRRLVKA+ED+MV YD T RNSLG+VIQF+YGEDGMD
Sbjct: 831  TAETGYIQRRLVKALEDIMVHYDNTTRNSLGNVIQFIYGEDGMD 874


>sp|Q75A34|RPB1_ASHGO DNA-directed RNA polymerase II subunit RPB1
            OS=Ashbya gossypii GN=RPB1 PE=3 SV=1
          Length = 1745

 Score =  195 bits (496), Expect = 5e-50
 Identities = 90/104 (86%), Positives = 99/104 (95%)
 Frame = -2

Query: 314  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
            EGKRI +GF DRTLPHF+KDDY PES+GFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK
Sbjct: 771  EGKRIAFGFADRTLPHFSKDDYSPESKGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 830

Query: 134  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
            T+ETGYIQRRLVKA+ED+MV YDGT RNSLG++IQF+YGEDGMD
Sbjct: 831  TAETGYIQRRLVKALEDIMVHYDGTTRNSLGNIIQFVYGEDGMD 874


>sp|P36594|RPB1_SCHPO DNA-directed RNA polymerase II subunit rpb1
            OS=Schizosaccharomyces pombe GN=rpb1 PE=1 SV=1
          Length = 1752

 Score =  190 bits (483), Expect = 2e-48
 Identities = 89/104 (85%), Positives = 97/104 (93%)
 Frame = -2

Query: 314  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
            EGKRIP+GF  RTLPHF KDD  PESRGF+ENSYLRGLTPQEFFFHAM GREGLIDTAVK
Sbjct: 777  EGKRIPFGFKYRTLPHFPKDDDSPESRGFIENSYLRGLTPQEFFFHAMAGREGLIDTAVK 836

Query: 134  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
            T+ETGYIQRRLVKAMEDVMV+YDGTVRN++GD+IQF YGEDG+D
Sbjct: 837  TAETGYIQRRLVKAMEDVMVRYDGTVRNAMGDIIQFAYGEDGLD 880


>sp|P04052|RPB1_DROME DNA-directed RNA polymerase II subunit RPB1
            OS=Drosophila melanogaster GN=RpII215 PE=1 SV=4
          Length = 1887

 Score =  185 bits (469), Expect = 7e-47
 Identities = 87/103 (84%), Positives = 93/103 (90%)
 Frame = -2

Query: 314  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
            EGKRIPYGF  RTLPHF KDDYGPESRGFVENSYL GLTP EF+FHAMGGREGLIDTAVK
Sbjct: 786  EGKRIPYGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDTAVK 845

Query: 134  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGM 6
            T+ETGYIQRRL+KAME VMV YDGTVRNS+G +IQ  YGEDG+
Sbjct: 846  TAETGYIQRRLIKAMESVMVNYDGTVRNSVGQLIQLRYGEDGL 888


>sp|P16356|RPB1_CAEEL DNA-directed RNA polymerase II subunit RPB1
            OS=Caenorhabditis elegans GN=ama-1 PE=1 SV=2
          Length = 1852

 Score =  184 bits (467), Expect = 1e-46
 Identities = 86/104 (82%), Positives = 93/104 (89%)
 Frame = -2

Query: 314  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
            EGKRIP+GF  RTLPHF KDDYGPES+GFVENSYL GLTP EFFFHAMGGREGLIDTAVK
Sbjct: 784  EGKRIPFGFRHRTLPHFIKDDYGPESKGFVENSYLAGLTPSEFFFHAMGGREGLIDTAVK 843

Query: 134  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
            T+ETGYIQRRL+KAME VMV YDGTVRNSL  ++Q  YGEDG+D
Sbjct: 844  TAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMVQLRYGEDGLD 887


>sp|P35074|RPB1_CAEBR DNA-directed RNA polymerase II subunit RPB1
            OS=Caenorhabditis briggsae GN=ama-1 PE=3 SV=2
          Length = 1853

 Score =  184 bits (467), Expect = 1e-46
 Identities = 86/104 (82%), Positives = 93/104 (89%)
 Frame = -2

Query: 314  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
            EGKRIP+GF  RTLPHF KDDYGPES+GFVENSYL GLTP EFFFHAMGGREGLIDTAVK
Sbjct: 788  EGKRIPFGFRHRTLPHFIKDDYGPESKGFVENSYLAGLTPSEFFFHAMGGREGLIDTAVK 847

Query: 134  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
            T+ETGYIQRRL+KAME VMV YDGTVRNSL  ++Q  YGEDG+D
Sbjct: 848  TAETGYIQRRLIKAMESVMVNYDGTVRNSLAQMVQLRYGEDGLD 891


>sp|P14248|RPB1_PLAFD DNA-directed RNA polymerase II subunit RPB1
            OS=Plasmodium falciparum (isolate CDC / Honduras) GN=RPII
            PE=3 SV=1
          Length = 2452

 Score =  183 bits (464), Expect = 3e-46
 Identities = 87/103 (84%), Positives = 93/103 (90%)
 Frame = -2

Query: 314  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
            EGKRIP+GF  R+LPHF K DYGPESRGFV NSYL GLTPQE FFHAMGGREG+IDTA K
Sbjct: 931  EGKRIPFGFNHRSLPHFIKFDYGPESRGFVSNSYLSGLTPQEVFFHAMGGREGIIDTACK 990

Query: 134  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGM 6
            TSETGYIQRRL+KAMEDVMV+YD TVRNS GD+IQFLYGEDGM
Sbjct: 991  TSETGYIQRRLIKAMEDVMVQYDRTVRNSYGDIIQFLYGEDGM 1033
tr_hit_id A9U396
Definition tr|A9U396|A9U396_PHYPA DNA-directed RNA polymerase OS=Physcomitrella patens subsp. patens
Align length 104
Score (bit) 216.0
E-value 3.0e-55
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916644|Adiantum capillus-veneris mRNA, clone:
YMU001_000089_H11.
         (315 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9U396|A9U396_PHYPA DNA-directed RNA polymerase OS=Physcomitr...   216   3e-55
tr|A9TK89|A9TK89_PHYPA DNA-directed RNA polymerase OS=Physcomitr...   216   3e-55
tr|Q71ET6|Q71ET6_MAGSO DNA-directed RNA polymerase (Fragment) OS...   216   6e-55
tr|Q1L5Z5|Q1L5Z5_RHOMC DNA-directed RNA polymerase (Fragment) OS...   216   6e-55
tr|B7SNX2|B7SNX2_PAPOR RNA polymerase II largest subunit (Fragme...   216   6e-55
tr|B7SNX0|B7SNX0_LIRTU RNA polymerase II largest subunit (Fragme...   216   6e-55
tr|B7SNW9|B7SNW9_ILLPA RNA polymerase II largest subunit (Fragme...   216   6e-55
tr|B7SNW7|B7SNW7_CERDE RNA polymerase II largest subunit (Fragme...   216   6e-55
tr|B7SNW6|B7SNW6_BETVU RNA polymerase II largest subunit (Fragme...   216   6e-55
tr|A7NVN7|A7NVN7_VITVI DNA-directed RNA polymerase OS=Vitis vini...   216   6e-55
tr|O04144|O04144_9VIRI DNA-directed RNA polymerase (Fragment) OS...   215   1e-54
tr|Q71ET7|Q71ET7_MAIZE DNA-directed RNA polymerase (Fragment) OS...   214   2e-54
tr|Q71ET5|Q71ET5_NYMOD DNA-directed RNA polymerase (Fragment) OS...   214   2e-54
tr|Q1L5Y7|Q1L5Y7_ANTMA DNA-directed RNA polymerase (Fragment) OS...   214   2e-54
tr|Q1L5Y6|Q1L5Y6_SOLLC DNA-directed RNA polymerase (Fragment) OS...   214   2e-54
tr|B8BAW1|B8BAW1_ORYSI Putative uncharacterized protein OS=Oryza...   214   2e-54
tr|B7SNX4|B7SNX4_PEA RNA polymerase II largest subunit (Fragment...   214   2e-54
tr|B7SNX1|B7SNX1_TOBAC RNA polymerase II largest subunit (Fragme...   214   2e-54
tr|Q71ET3|Q71ET3_PSINU DNA-directed RNA polymerase (Fragment) OS...   214   2e-54
tr|Q71ET4|Q71ET4_AMBTC DNA-directed RNA polymerase (Fragment) OS...   212   9e-54
tr|A3BPR9|A3BPR9_ORYSJ DNA-directed RNA polymerase OS=Oryza sati...   212   9e-54
tr|B7SNW5|B7SNW5_ASPOF RNA polymerase II largest subunit (Fragme...   211   2e-53
tr|B7SNW8|B7SNW8_DRIWI RNA polymerase II largest subunit (Fragme...   209   4e-53
tr|Q5WMZ9|Q5WMZ9_ORYSJ DNA-directed RNA polymerase OS=Oryza sati...   209   6e-53
tr|Q0DKN9|Q0DKN9_ORYSJ DNA-directed RNA polymerase OS=Oryza sati...   209   6e-53
tr|A3B018|A3B018_ORYSJ DNA-directed RNA polymerase OS=Oryza sati...   209   6e-53
tr|B7SNX5|B7SNX5_SARHE RNA polymerase II largest subunit (Fragme...   209   7e-53
tr|B7SNX3|B7SNX3_PERAE RNA polymerase II largest subunit (Fragme...   209   7e-53
tr|Q71EU0|Q71EU0_CYCRE DNA-directed RNA polymerase (Fragment) OS...   207   2e-52
tr|Q71ET9|Q71ET9_9CONI DNA-directed RNA polymerase (Fragment) OS...   207   2e-52

>tr|A9U396|A9U396_PHYPA DNA-directed RNA polymerase OS=Physcomitrella
            patens subsp. patens GN=PHYPADRAFT_101222 PE=3 SV=1
          Length = 1742

 Score =  216 bits (551), Expect = 3e-55
 Identities = 104/104 (100%), Positives = 104/104 (100%)
 Frame = -2

Query: 314  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
            EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK
Sbjct: 792  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 851

Query: 134  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
            TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD
Sbjct: 852  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 895


>tr|A9TK89|A9TK89_PHYPA DNA-directed RNA polymerase OS=Physcomitrella
            patens subsp. patens GN=PHYPADRAFT_93853 PE=3 SV=1
          Length = 1646

 Score =  216 bits (551), Expect = 3e-55
 Identities = 104/104 (100%), Positives = 104/104 (100%)
 Frame = -2

Query: 314  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
            EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK
Sbjct: 792  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 851

Query: 134  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
            TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD
Sbjct: 852  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 895


>tr|Q71ET6|Q71ET6_MAGSO DNA-directed RNA polymerase (Fragment)
            OS=Magnolia soulangeana GN=RPB1 PE=2 SV=1
          Length = 1010

 Score =  216 bits (549), Expect = 6e-55
 Identities = 102/104 (98%), Positives = 104/104 (100%)
 Frame = -2

Query: 314  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
            EGKRIPYGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK
Sbjct: 708  EGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 767

Query: 134  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
            TSETGYIQRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMD
Sbjct: 768  TSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD 811


>tr|Q1L5Z5|Q1L5Z5_RHOMC DNA-directed RNA polymerase (Fragment)
           OS=Rhododendron macrophyllum GN=RPB1 PE=3 SV=1
          Length = 589

 Score =  216 bits (549), Expect = 6e-55
 Identities = 102/104 (98%), Positives = 104/104 (100%)
 Frame = -2

Query: 314 EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
           EGKRIPYGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK
Sbjct: 298 EGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 357

Query: 134 TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
           TSETGYIQRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMD
Sbjct: 358 TSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD 401


>tr|B7SNX2|B7SNX2_PAPOR RNA polymerase II largest subunit (Fragment)
            OS=Papaver orientale GN=rpb1 PE=2 SV=1
          Length = 1010

 Score =  216 bits (549), Expect = 6e-55
 Identities = 102/104 (98%), Positives = 104/104 (100%)
 Frame = -2

Query: 314  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
            EGKRIPYGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK
Sbjct: 708  EGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 767

Query: 134  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
            TSETGYIQRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMD
Sbjct: 768  TSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD 811


>tr|B7SNX0|B7SNX0_LIRTU RNA polymerase II largest subunit (Fragment)
            OS=Liriodendron tulipifera GN=rpb1 PE=2 SV=1
          Length = 1010

 Score =  216 bits (549), Expect = 6e-55
 Identities = 102/104 (98%), Positives = 104/104 (100%)
 Frame = -2

Query: 314  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
            EGKRIPYGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK
Sbjct: 708  EGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 767

Query: 134  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
            TSETGYIQRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMD
Sbjct: 768  TSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD 811


>tr|B7SNW9|B7SNW9_ILLPA RNA polymerase II largest subunit (Fragment)
            OS=Illicium parviflorum GN=rpb1 PE=2 SV=1
          Length = 1013

 Score =  216 bits (549), Expect = 6e-55
 Identities = 102/104 (98%), Positives = 104/104 (100%)
 Frame = -2

Query: 314  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
            EGKRIPYGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK
Sbjct: 711  EGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 770

Query: 134  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
            TSETGYIQRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMD
Sbjct: 771  TSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD 814


>tr|B7SNW7|B7SNW7_CERDE RNA polymerase II largest subunit (Fragment)
            OS=Ceratophyllum demersum GN=rpb1 PE=2 SV=1
          Length = 1010

 Score =  216 bits (549), Expect = 6e-55
 Identities = 102/104 (98%), Positives = 104/104 (100%)
 Frame = -2

Query: 314  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
            EGKRIPYGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK
Sbjct: 708  EGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 767

Query: 134  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
            TSETGYIQRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMD
Sbjct: 768  TSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD 811


>tr|B7SNW6|B7SNW6_BETVU RNA polymerase II largest subunit (Fragment)
            OS=Beta vulgaris GN=rpb1 PE=2 SV=1
          Length = 1012

 Score =  216 bits (549), Expect = 6e-55
 Identities = 102/104 (98%), Positives = 104/104 (100%)
 Frame = -2

Query: 314  EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
            EGKRIPYGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK
Sbjct: 710  EGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 769

Query: 134  TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
            TSETGYIQRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMD
Sbjct: 770  TSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD 813


>tr|A7NVN7|A7NVN7_VITVI DNA-directed RNA polymerase OS=Vitis
           vinifera GN=GSVIVT00015507001 PE=3 SV=1
          Length = 1010

 Score =  216 bits (549), Expect = 6e-55
 Identities = 102/104 (98%), Positives = 104/104 (100%)
 Frame = -2

Query: 314 EGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 135
           EGKRIPYGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK
Sbjct: 26  EGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVK 85

Query: 134 TSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMD 3
           TSETGYIQRRLVKAMED+MVKYDGTVRNSLGDVIQFLYGEDGMD
Sbjct: 86  TSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD 129