BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916649|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_A05.
         (564 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9V5M3|LOLA6_DROME Longitudinals lacking protein, isoforms N/...    33   1.3  
sp|P16760|UL24_HCMVA Protein UL24 OS=Human cytomegalovirus (stra...    32   2.2  
sp|Q8W3K0|DRL9_ARATH Probable disease resistance protein At1g586...    32   2.2  
sp|O55187|CBX4_MOUSE E3 SUMO-protein ligase CBX4 OS=Mus musculus...    30   8.3  

>sp|Q9V5M3|LOLA6_DROME Longitudinals lacking protein, isoforms
           N/O/W/X/Y OS=Drosophila melanogaster GN=lola PE=1 SV=3
          Length = 878

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = +3

Query: 366 QQHKTFVHGFALNLKLK--PHGGQTVSKIHLSLIRHGQKDQILRQSLPILHTRHRLHTAN 539
           ++HK +  G   NLK    PH  + V    ++ +RHG K+Q+L Q     +T  RL    
Sbjct: 725 KRHKNYECGVEPNLKCPHCPHKCKCVLAQVVNFVRHGPKNQLLCQCGRYYNTLSRL---- 780

Query: 540 LLHQR 554
           +LHQR
Sbjct: 781 MLHQR 785


>sp|P16760|UL24_HCMVA Protein UL24 OS=Human cytomegalovirus (strain
           AD169) GN=UL24 PE=3 SV=2
          Length = 300

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
 Frame = -3

Query: 532 VCNLCLVCRIGRDCLRIWSF*PWRINERWILLTVWPP*GFNFKL------------SAKP 389
           + +L L    G  CL  +     RIN   +L  VWPP G+N  L              K 
Sbjct: 4   LASLALTAEFGLGCLEAYV----RINAGQVLPVVWPP-GWNLVLQEIETDEDFKPEDVKA 58

Query: 388 WTNVLCC 368
           W++ LCC
Sbjct: 59  WSHYLCC 65


>sp|Q8W3K0|DRL9_ARATH Probable disease resistance protein At1g58602
            OS=Arabidopsis thaliana GN=At1g58602 PE=2 SV=1
          Length = 1138

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +3

Query: 399  LNLKLKPHGGQTVSKIHLSLIRHGQKDQILRQ-SLPILHTRHRLHTANL 542
            L LK  P+G   +  +HL+ +   ++  I++Q S+P+LHT +  H   L
Sbjct: 952  LKLKKLPNGFPQLQNLHLTEVEEWEEGMIVKQGSMPLLHTLYIWHCPKL 1000


>sp|O55187|CBX4_MOUSE E3 SUMO-protein ligase CBX4 OS=Mus musculus
           GN=Cbx4 PE=1 SV=2
          Length = 551

 Score = 30.0 bits (66), Expect = 8.3
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +1

Query: 10  SNHQAAHYEHVHVLSRAQAAHKHSHHVPGSTFP*ELNNVRKDCLS 144
           S+H  AH+ H H        H H HH  G      L++ RK CLS
Sbjct: 377 SSHPPAHHHHHH-------HHHHHHHTVGLN----LSHARKRCLS 410

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916649|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_A05.
         (564 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5EBP4|A5EBP4_BRASB Putative High affinity nickel transporter...    34   6.4  

>tr|A5EBP4|A5EBP4_BRASB Putative High affinity nickel transporter
           OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
           GN=BBta_1353 PE=4 SV=1
          Length = 406

 Score = 33.9 bits (76), Expect = 6.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 1   HGISNHQAAHYEHVHVLSRAQAAHKHSHH 87
           HG  +H   H++H H +++A   H H HH
Sbjct: 242 HGHDHHGHHHHDHAHAVAQAHVHHHHVHH 270