BP916650
Clone id YMU001_000090_A06
Library
Length 486
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000090_A06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTGATTCACAACCATTGTTCCGTCAAAATGCTTAAAAGAACACTCACACTCTCAATCACA
GCCATTCCAATTGCCCGCATTGTGCCGTAGCACATAAACAATGTGAAATAAAAATACTCA
CCTCACTTTTTATATTTTTTGATGCATATCTACACAACACTTTCAGGCCCCTCCCAACAA
TATTTCCAAGTACCAATATGCACATCAAGTTCAGACAGGCTGGCATCATTTAGCATACTA
CATCACTGTCTTTTTCTTGTGACCAGCAATCGCAACTACCCCGCCAGTTACCAGAGGATC
CAAACCGGGGATAACCCATGTCAAGCAGAAACCCTTGAGAATTCCATGACAGTTACTTCC
ATCCCTTAGCTTCAGGGACGTGAGTGCAGATTGCCTCATCCACTTCTCAAACTCCTCTGT
TCCCATGCTGAACTTTGCATTTTGCTATGTGCCATTGCATAAAATCTCATGTTCCTTCAG
ATGTCT
■■Homology search results ■■ -
sp_hit_id Q8CY42
Definition sp|Q8CY42|RSH_BRUSU GTP pyrophosphokinase rsh OS=Brucella suis
Align length 71
Score (bit) 35.8
E-value 0.11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916650|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_A06.
(486 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8CY42|RSH_BRUSU GTP pyrophosphokinase rsh OS=Brucella suis G... 36 0.11
sp|A5VPI9|RSH_BRUO2 GTP pyrophosphokinase rsh OS=Brucella ovis (... 36 0.11
sp|Q8YG65|RSH_BRUME GTP pyrophosphokinase rsh OS=Brucella melite... 36 0.11
sp|Q57E90|RSH_BRUAB GTP pyrophosphokinase rsh OS=Brucella abortu... 36 0.11
sp|Q2YN11|RSH_BRUA2 GTP pyrophosphokinase rsh OS=Brucella abortu... 36 0.11
sp|O19133|G6PC_CANFA Glucose-6-phosphatase OS=Canis familiaris G... 31 3.4
sp|Q29RU6|G6PC_BOVIN Glucose-6-phosphatase OS=Bos taurus GN=G6PC... 31 3.4
sp|P03380|ENV_BLVJ Envelope glycoprotein OS=Bovine leukemia viru... 30 5.8
sp|P25507|ENV_BLVB5 Envelope glycoprotein OS=Bovine leukemia vir... 30 5.8
sp|P25506|ENV_BLVB2 Envelope glycoprotein OS=Bovine leukemia vir... 30 5.8
sp|P25505|ENV_BLVAV Envelope glycoprotein OS=Bovine leukemia vir... 30 5.8
sp|P25057|ENV_BLVAU Envelope glycoprotein OS=Bovine leukemia vir... 30 5.8
sp|P25504|ENV_BLVAF Envelope glycoprotein OS=Bovine leukemia vir... 30 5.8
sp|P51519|ENV_BLV Envelope glycoprotein OS=Bovine leukemia virus... 30 5.8
sp|Q4V8G4|WDR78_RAT WD repeat-containing protein 78 OS=Rattus no... 30 7.5
sp|P16490|ORF2A_CMVFN RNA-directed RNA polymerase 2A OS=Cucumber... 30 7.5
sp|P35575|G6PC_HUMAN Glucose-6-phosphatase OS=Homo sapiens GN=G6... 30 7.6
sp|Q19KA1|G6PC_FELCA Glucose-6-phosphatase OS=Felis silvestris c... 30 7.6
sp|Q6W5P4|NPSR1_HUMAN Neuropeptide S receptor OS=Homo sapiens GN... 29 9.9

>sp|Q8CY42|RSH_BRUSU GTP pyrophosphokinase rsh OS=Brucella suis
GN=rsh PE=1 SV=1
Length = 750

Score = 35.8 bits (81), Expect = 0.11
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 306 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKISTETNAYAWLRQ 365

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 366 TIEQLSEGDNP 376


>sp|A5VPI9|RSH_BRUO2 GTP pyrophosphokinase rsh OS=Brucella ovis
(strain ATCC 25840 / 63/290 / NCTC 10512) GN=rsh PE=3
SV=1
Length = 750

Score = 35.8 bits (81), Expect = 0.11
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 306 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKISTETNAYAWLRQ 365

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 366 TIEQLSEGDNP 376


>sp|Q8YG65|RSH_BRUME GTP pyrophosphokinase rsh OS=Brucella
melitensis GN=rsh PE=1 SV=2
Length = 750

Score = 35.8 bits (81), Expect = 0.11
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 306 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKISTETNAYAWLRQ 365

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 366 TIEQLSEGDNP 376


>sp|Q57E90|RSH_BRUAB GTP pyrophosphokinase rsh OS=Brucella abortus
GN=rsh PE=1 SV=1
Length = 750

Score = 35.8 bits (81), Expect = 0.11
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 306 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKISTETNAYAWLRQ 365

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 366 TIEQLSEGDNP 376


>sp|Q2YN11|RSH_BRUA2 GTP pyrophosphokinase rsh OS=Brucella abortus
(strain 2308) GN=rsh PE=3 SV=1
Length = 750

Score = 35.8 bits (81), Expect = 0.11
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 306 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKISTETNAYAWLRQ 365

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 366 TIEQLSEGDNP 376


>sp|O19133|G6PC_CANFA Glucose-6-phosphatase OS=Canis familiaris
GN=G6PC PE=1 SV=1
Length = 357

Score = 30.8 bits (68), Expect = 3.4
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = +1

Query: 139 LMHIYTTLSGPSQQ---YFQVPICTSSSDRLASFSILHHCL 252
L+H++ +L PSQ ++ + C S++ LAS S++ +CL
Sbjct: 305 LLHLFDSLKPPSQTELIFYTLSFCKSAAVPLASVSLIPYCL 345


>sp|Q29RU6|G6PC_BOVIN Glucose-6-phosphatase OS=Bos taurus GN=G6PC
PE=2 SV=1
Length = 357

Score = 30.8 bits (68), Expect = 3.4
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +1

Query: 139 LMHIYTTLSGPSQQ---YFQVPICTSSSDRLASFSILHHCLFLVTSNRN 276
L+H++ +L PSQ ++ + C S++ LAS S++ +CL V N
Sbjct: 305 LLHLFDSLKPPSQIELIFYVLSFCKSAAVPLASVSLIPYCLAWVLGQPN 353


>sp|P03380|ENV_BLVJ Envelope glycoprotein OS=Bovine leukemia virus
(isolate Japanese BLV-1) GN=env PE=1 SV=1
Length = 515

Score = 30.0 bits (66), Expect = 5.8
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1

Query: 351 CHGILKGFCLTWVIPGLDPLVT 286
CHGI F LTW I G DPL+T
Sbjct: 152 CHGI---FTLTWEIWGYDPLIT 170


>sp|P25507|ENV_BLVB5 Envelope glycoprotein OS=Bovine leukemia virus
(isolate Belgium LB59) GN=env PE=3 SV=1
Length = 515

Score = 30.0 bits (66), Expect = 5.8
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1

Query: 351 CHGILKGFCLTWVIPGLDPLVT 286
CHGI F LTW I G DPL+T
Sbjct: 152 CHGI---FTLTWEIWGYDPLIT 170


>sp|P25506|ENV_BLVB2 Envelope glycoprotein OS=Bovine leukemia virus
(isolate Belgium LB285) GN=env PE=3 SV=1
Length = 515

Score = 30.0 bits (66), Expect = 5.8
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1

Query: 351 CHGILKGFCLTWVIPGLDPLVT 286
CHGI F LTW I G DPL+T
Sbjct: 152 CHGI---FTLTWEIWGYDPLIT 170


tr_hit_id B2SAD0
Definition tr|B2SAD0|B2SAD0_BRUA1 RelA/SpoT family protein OS=Brucella abortus (strain S19)
Align length 71
Score (bit) 35.8
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916650|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_A06.
(486 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B2SAD0|B2SAD0_BRUA1 RelA/SpoT family protein OS=Brucella abor... 36 1.1
tr|B0CKX8|B0CKX8_BRUSI RelA/SpoT family protein OS=Brucella suis... 36 1.1
tr|A9MA27|A9MA27_BRUC2 RelA/SpoT family protein OS=Brucella cani... 36 1.1
tr|A6X295|A6X295_OCHA4 (P)ppGpp synthetase I, SpoT/RelA OS=Ochro... 36 1.1
tr|Q11JT2|Q11JT2_MESSB (P)ppGpp synthetase I, SpoT/RelA OS=Mesor... 35 1.9
tr|A0NMC4|A0NMC4_9RHOB GTP pyrophosphokinase OS=Labrenzia aggreg... 34 3.2
tr|Q6G087|Q6G087_BARQU GTP pyrophosphokinase OS=Bartonella quint... 33 7.2
tr|Q20382|Q20382_CAEEL Putative uncharacterized protein OS=Caeno... 33 9.1
tr|A9LY81|A9LY81_BLV Gp51 protein (Fragment) OS=Bovine leukemia ... 33 9.3
tr|Q985B2|Q985B2_RHILO GTP pyrophosphokinase OS=Rhizobium loti G... 33 9.3
tr|Q6G464|Q6G464_BARHE GTP pyrophosphokinase OS=Bartonella hense... 33 9.3
tr|A1US31|A1US31_BARBK GTP pyrophosphokinase OS=Bartonella bacil... 33 9.3

>tr|B2SAD0|B2SAD0_BRUA1 RelA/SpoT family protein OS=Brucella abortus
(strain S19) GN=BAbS19_I06290 PE=4 SV=1
Length = 720

Score = 35.8 bits (81), Expect = 1.1
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 276 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKISTETNAYAWLRQ 335

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 336 TIEQLSEGDNP 346


>tr|B0CKX8|B0CKX8_BRUSI RelA/SpoT family protein OS=Brucella suis
(strain ATCC 23445 / NCTC 10510) GN=BSUIS_A0680 PE=4
SV=1
Length = 750

Score = 35.8 bits (81), Expect = 1.1
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 306 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKISTETNAYAWLRQ 365

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 366 TIEQLSEGDNP 376


>tr|A9MA27|A9MA27_BRUC2 RelA/SpoT family protein OS=Brucella canis
(strain ATCC 23365 / NCTC 10854) GN=BCAN_A0665 PE=4 SV=1
Length = 750

Score = 35.8 bits (81), Expect = 1.1
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 306 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKISTETNAYAWLRQ 365

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 366 TIEQLSEGDNP 376


>tr|A6X295|A6X295_OCHA4 (P)ppGpp synthetase I, SpoT/RelA
OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 /
NCTC 12168) GN=Oant_2636 PE=3 SV=1
Length = 748

Score = 35.8 bits (81), Expect = 1.1
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYP--------------A 285
I+TT+ GPS+Q ++ I T D +A F + H ++ + N P
Sbjct: 306 IHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKDRGSANNPHKMSTETNAYAWLRQ 365

Query: 286 SYQRIQTGDNP 318
+ +++ GDNP
Sbjct: 366 TIEQLSEGDNP 376


>tr|Q11JT2|Q11JT2_MESSB (P)ppGpp synthetase I, SpoT/RelA
OS=Mesorhizobium sp. (strain BNC1) GN=Meso_0946 PE=3
SV=1
Length = 745

Score = 35.0 bits (79), Expect = 1.9
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 16/82 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLF------------LVTSNRNYPA-- 285
I+TT+ GPS+Q ++ I T DR+A + + H L+ ++ + N A
Sbjct: 306 IHTTIVGPSRQRVELQIRTREMDRIAEYGVAAHSLYKDFGPKLNGTGHQISKDTNAYAWL 365

Query: 286 --SYQRIQTGDNPCQAETLENS 345
+ +++ GDNP E LEN+
Sbjct: 366 RHTIEQLSEGDNP--EEFLENT 385


>tr|A0NMC4|A0NMC4_9RHOB GTP pyrophosphokinase OS=Labrenzia aggregata
IAM 12614 GN=SIAM614_10333 PE=3 SV=1
Length = 748

Score = 34.3 bits (77), Expect = 3.2
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLF 255
I+TT+ GPS+Q ++ I T + DR+A + I H L+
Sbjct: 306 IHTTIVGPSRQRVELQIRTIAMDRVAEYGIAAHALY 341


>tr|Q6G087|Q6G087_BARQU GTP pyrophosphokinase OS=Bartonella quintana
GN=spoT PE=3 SV=1
Length = 742

Score = 33.1 bits (74), Expect = 7.2
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 14/71 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLF-----------LVTSNRNYPASYQ 294
I+TT+ GPS+Q ++ I T++ D +A + + H ++ L Y Q
Sbjct: 306 IHTTIVGPSRQRVELQIRTAAMDEIAEYGVAAHSIYKDHGSDYSTSKLSNETNAYAWLRQ 365

Query: 295 RIQT---GDNP 318
IQ+ GDNP
Sbjct: 366 TIQSLSDGDNP 376


>tr|Q20382|Q20382_CAEEL Putative uncharacterized protein
OS=Caenorhabditis elegans GN=F44A2.7 PE=1 SV=2
Length = 313

Score = 32.7 bits (73), Expect = 9.1
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3

Query: 39 NTHTLNHSHSNCPHCAVAHKQCEIKILTSLFIFFDAYLHNTFRPLPTIFPSTNMHIKF 212
N T++ +S+CP A IL S+ F+ +TF+ L TI+PSTN+ I F
Sbjct: 223 NRLTISPLYSDCPEIAAM-------ILKSILNSFE---FSTFKSLSTIYPSTNLAIPF 270


>tr|A9LY81|A9LY81_BLV Gp51 protein (Fragment) OS=Bovine leukemia
virus GN=env PE=4 SV=1
Length = 249

Score = 32.7 bits (73), Expect = 9.3
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -1

Query: 351 CHGILKGFCLTWVIPGLDPLVTGGVVAIAGH 259
CHGI F LTW I G DPL+T + I H
Sbjct: 128 CHGI---FTLTWEIKGYDPLITFSLHKIPDH 155


>tr|Q985B2|Q985B2_RHILO GTP pyrophosphokinase OS=Rhizobium loti
GN=mlr7755 PE=3 SV=1
Length = 742

Score = 32.7 bits (73), Expect = 9.3
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 16/82 (19%)
Frame = +1

Query: 148 IYTTLSGPSQQYFQVPICTSSSDRLASFSILHHCLFLVTSNRNYPASY------------ 291
I+TT+ GPS+Q ++ I T +++A + + H ++ T + A +
Sbjct: 306 IHTTIVGPSRQRVELQIRTREMNKIAEYGVAAHSIYKDTGGKTNGAGHAISKETNAYAWL 365

Query: 292 ----QRIQTGDNPCQAETLENS 345
+++ GDNP + LEN+
Sbjct: 366 RRTIEQLAEGDNP--EDFLENT 385