BP916653
Clone id YMU001_000090_A09
Library
Length 544
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000090_A09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATGAAGCTTATCTTCCTTACTCCTCTCAAAATCGGCGCTCTCACTTTCTTTTTTGACGAT
GTCAGTGTTCTTTGAAAGTGAATCTTCTTTCCAGCAAATGTCTTGCAACGCAGTGTTCTC
ATTTGCTTTTCCCAGTTGCTGTTCCACACCAATGTCGCCACTTTCATCAATGTCATCACT
TTCTTCCTTCTGGGGCTCCCCATAACCGAGTTTCTTTTCAACAACACATGTTTGCCCCTC
CGCTCGTCCATCATTTGAATCCACGTCCATGGAGGTTACAATTGGCTCATTTTGCTTTTG
TGAAGTCTCATAGTACCTTGATGGAAGGTCAGAAGGGCAAGCAATGTCGACTGAATGTGT
TCTGGTGAAATTGGTGTCTGCATTGACAAGGGCCTCAGCTTCCTTGTCGCCATTGCCACC
TCCAGCATGATTGTCTTTCTCCTGGAGGGCAACAGTGTCATCGTCACCATCTCGTGGGCA
GTTCTTTTCAACATCCACTTTGCTATGCGTATCTTTGGTACTGTCTACGCGGCCACCATG
AGAG
■■Homology search results ■■ -
sp_hit_id Q62598
Definition sp|Q62598|DSPP_RAT Dentin sialophosphoprotein OS=Rattus norvegicus
Align length 98
Score (bit) 33.9
E-value 0.52
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916653|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_A09.
(544 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q62598|DSPP_RAT Dentin sialophosphoprotein OS=Rattus norvegic... 34 0.52
sp|O55092|SLK_CAVPO STE20-like serine/threonine-protein kinase O... 33 1.2
sp|Q9Z0Z5|S13A3_RAT Solute carrier family 13 member 3 OS=Rattus ... 32 1.5
sp|Q91Y63|S13A3_MOUSE Solute carrier family 13 member 3 OS=Mus m... 31 3.4
sp|A2VD23|STM_DANRE Protein starmaker OS=Danio rerio GN=stm PE=2... 31 4.4
sp|Q5HJU7|PLS_STAAC Putative surface protein SACOL0050 OS=Staphy... 30 5.8
sp|Q9HDC5|JPH1_HUMAN Junctophilin-1 OS=Homo sapiens GN=JPH1 PE=1... 30 5.8
sp|Q12019|MDN1_YEAST Midasin OS=Saccharomyces cerevisiae GN=MDN1... 30 7.6
sp|P20279|RL3_HALMA 50S ribosomal protein L3P OS=Haloarcula mari... 30 9.9
sp|Q9HNF0|RF1_HALSA Peptide chain release factor subunit 1 OS=Ha... 30 9.9
sp|P80544|PLS_STAAU Surface protein OS=Staphylococcus aureus GN=... 30 9.9
sp|P48357|LEPR_HUMAN Leptin receptor OS=Homo sapiens GN=LEPR PE=... 30 9.9
sp|Q6P5F6|S39AA_MOUSE Zinc transporter ZIP10 OS=Mus musculus GN=... 30 9.9

>sp|Q62598|DSPP_RAT Dentin sialophosphoprotein OS=Rattus norvegicus
GN=Dspp PE=1 SV=2
Length = 687

Score = 33.9 bits (76), Expect = 0.52
Identities = 31/98 (31%), Positives = 51/98 (52%)
Frame = -2

Query: 543 SHGGRVDSTKDTHSKVDVEKNCPRDGDDDTVALQEKDNHAGGGNGDKEAEALVNADTNFT 364
SH G DS+ DT D + N GDDD+ + ++KD + N D ++++ +D++ +
Sbjct: 495 SHAGEDDSSDDTSDTDDSDSN----GDDDSES-KDKD-ESDNSNHDNDSDSESKSDSSDS 548

Query: 363 RTHSVDIACPSDLPSRYYETSQKQNEPIVTSMDVDSND 250
+ S D + SD S ETS ++ TS DS+D
Sbjct: 549 DSDSSDSSDSSD-SSDSSETSD-SSDSSDTSDSSDSSD 584


>sp|O55092|SLK_CAVPO STE20-like serine/threonine-protein kinase
OS=Cavia porcellus GN=SLK PE=1 SV=1
Length = 1231

Score = 32.7 bits (73), Expect = 1.2
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 24/118 (20%)
Frame = -2

Query: 528 VDSTKDTHSKVDVEKNCPRDGDDDTVALQEKDNHAGG-------------GNGDKE---- 400
V + +DTH K+ + +D DT ++ E+D G G+G KE
Sbjct: 510 VHAVEDTHEKLRKDDTTQKDVISDTSSVGERDEEIGAVPKTAESSAEGAQGDGGKETDEG 569

Query: 399 AEALVNADTNFTRTHSVDIACP-------SDLPSRYYETSQKQNEPIVTSMDVDSNDG 247
A+ L++ T + + A P +D + E + ++ PI + +D+++G
Sbjct: 570 AQILISKATEGPKASGTEEAPPVTEITETNDTDQKLVENTHEKQLPISSETTLDTSEG 627


>sp|Q9Z0Z5|S13A3_RAT Solute carrier family 13 member 3 OS=Rattus
norvegicus GN=Slc13a3 PE=2 SV=1
Length = 600

Score = 32.3 bits (72), Expect = 1.5
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = -2

Query: 516 KDTHSKVDVEKNCPRDGDDDTVALQEKDNHAGGGNGDKEAEALVNADTNFTRTHSVDIAC 337
K + D K+ PR+G+D T A++ GNG + + + H+ D+
Sbjct: 160 KSLFGQRDTRKDLPREGEDSTAAVR--------GNGLRTVPTEMQFLASSEGGHAEDVEA 211

Query: 336 PSDLPSRYYETSQKQN 289
P +LP E ++N
Sbjct: 212 PLELPDDSKEEEHRRN 227


>sp|Q91Y63|S13A3_MOUSE Solute carrier family 13 member 3 OS=Mus
musculus GN=Slc13a3 PE=2 SV=1
Length = 600

Score = 31.2 bits (69), Expect = 3.4
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = -2

Query: 516 KDTHSKVDVEKNCPRDGDDDTVALQEKDNHAGGGNGDKEAEALVNADTNFTRTHSVDIAC 337
K + + K+ PR+GD+ T A+Q GNG + + + H+ D
Sbjct: 160 KSLFGQREARKDLPREGDESTAAVQ--------GNGLRTVPTEMQFLASSEGGHTEDAEA 211

Query: 336 PSDLPSRYYETSQKQN 289
P +LP E ++N
Sbjct: 212 PMELPDDSKEEEHRRN 227


>sp|A2VD23|STM_DANRE Protein starmaker OS=Danio rerio GN=stm PE=2
SV=1
Length = 613

Score = 30.8 bits (68), Expect = 4.4
Identities = 19/92 (20%), Positives = 39/92 (42%)
Frame = -2

Query: 525 DSTKDTHSKVDVEKNCPRDGDDDTVALQEKDNHAGGGNGDKEAEALVNADTNFTRTHSVD 346
DS D+HS D + + D D D+ + + D+ + + DK+ + ++++ + D
Sbjct: 432 DSHSDSHSDSDSDSHSDSDSDSDSDSDSDSDSDSDSNSRDKDEKKDKSSESRDEDSSDSD 491

Query: 345 IACPSDLPSRYYETSQKQNEPIVTSMDVDSND 250
S+ E + + V DS+D
Sbjct: 492 SKSNSESSETAEEDTNDDKDSSVEKDKTDSSD 523


>sp|Q5HJU7|PLS_STAAC Putative surface protein SACOL0050
OS=Staphylococcus aureus (strain COL) GN=SACOL0050 PE=4
SV=1
Length = 1548

Score = 30.4 bits (67), Expect = 5.8
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -2

Query: 540 HGGRVDSTKDTHSKVDVEKNCPRDGDDDTVALQEKDNHA---GGGNGDKEAEALVNADTN 370
HG + DS D+ S D + + D D D+ + + D+ + + D +A++ +AD++
Sbjct: 1181 HGAKDDSDADSDSDADSDSDADSDSDADSDSDADSDSDSDSDSDSDSDSDADSDSDADSD 1240

Query: 369 FTRTHSVDIACPSDLPS 319
D SD S
Sbjct: 1241 SDSDSDSDADSDSDADS 1257


>sp|Q9HDC5|JPH1_HUMAN Junctophilin-1 OS=Homo sapiens GN=JPH1 PE=1
SV=2
Length = 661

Score = 30.4 bits (67), Expect = 5.8
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = -2

Query: 405 KEAEALVNADTNFTRTHSVDIACPSDLPSRYYETSQKQNEPIVTSMDVDSNDGRAEGQTC 226
KEA A+V + ++ H + +L S+Y+ K N P +DV+ DG ++ +
Sbjct: 521 KEAGAVV-PQSKYSGRHHIPNPSNGELHSQYHGYYVKLNAPQHPPVDVEDGDGSSQSSSA 579

Query: 225 VVEK 214
+V K
Sbjct: 580 LVHK 583


>sp|Q12019|MDN1_YEAST Midasin OS=Saccharomyces cerevisiae GN=MDN1 PE=1
SV=1
Length = 4910

Score = 30.0 bits (66), Expect = 7.6
Identities = 33/175 (18%), Positives = 65/175 (37%), Gaps = 2/175 (1%)
Frame = -2

Query: 525 DSTKDTHSKVDVEKNCPRDGDDDTVALQ--EKDNHAGGGNGDKEAEALVNADTNFTRTHS 352
+ +D D + N P DGD++ + E++N G + + E + + N +
Sbjct: 4193 EQQRDNKEGGDEDPNAPEDGDEEIENDENAEEENDVGEQEDEVKDEEGEDLEANVPEIET 4252

Query: 351 VDIACPSDLPSRYYETSQKQNEPIVTSMDVDSNDGRAEGQTCVVEKKLGYGEPQKXXXXX 172
+D+ +L S + E+ + DVD +DG + E+ E K
Sbjct: 4253 LDLPEDMNLDSEHEESDE----------DVDMSDGMPDDLN--KEEVGNEDEEVKQESGI 4300

Query: 171 XXXXXXXXXEQQLGKANENTALQDICWKEDSLSKNTDIVKKESESADFERSKEDK 7
+ TAL + E+ + D K++ E+ E++ D+
Sbjct: 4301 ESDNENDEPGPEEDAGETETALDEEEGAEEDVDMTNDEGKEDEENGPEEQAMSDE 4355


>sp|P20279|RL3_HALMA 50S ribosomal protein L3P OS=Haloarcula
marismortui GN=rpl3p PE=1 SV=5
Length = 338

Score = 29.6 bits (65), Expect = 9.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2

Query: 519 TKDTHSKVDVEKNCPRDGDDDTVALQEKDNHAGGGNGD 406
T + HS++D + P D D D Q +D H G GD
Sbjct: 103 TDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGD 140


>sp|Q9HNF0|RF1_HALSA Peptide chain release factor subunit 1
OS=Halobacterium salinarium GN=prf1 PE=3 SV=2
Length = 416

Score = 29.6 bits (65), Expect = 9.9
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = -2

Query: 384 NADTNFTRTHSVDIACPSDLPSRYYETSQKQNEPIVTSMDVDSNDGRAEGQTCVVE 217
N + TRT+ D RYY+T N +V S VDS GR + T V+E
Sbjct: 61 NIKSKQTRTNVQDALTSIKDRLRYYDTFPPDNGMVVFSGAVDSGGGRTDMVTEVLE 116


tr_hit_id A5CAJ1
Definition tr|A5CAJ1|A5CAJ1_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 83
Score (bit) 35.4
E-value 2.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916653|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_A09.
(544 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5CAJ1|A5CAJ1_VITVI Putative uncharacterized protein OS=Vitis... 35 2.0
tr|Q6FM64|Q6FM64_CANGA Similar to uniprot|P43597 Saccharomyces c... 35 2.0
tr|A8S394|A8S394_9CLOT Putative uncharacterized protein OS=Clost... 33 2.3
tr|A6TJ18|A6TJ18_KLEP7 Putative uncharacterized protein OS=Klebs... 35 2.6
tr|B8A0C9|B8A0C9_MAIZE Putative uncharacterized protein OS=Zea m... 35 2.6
tr|Q6C940|Q6C940_YARLI YALI0D14454p OS=Yarrowia lipolytica GN=YA... 35 2.6
tr|A3SWB8|A3SWB8_9RHOB Ribonuclease, Rne/Rng family protein OS=S... 34 4.4
tr|Q8P8K8|Q8P8K8_XANCP Cytochrome D ubiquinol oxidase subunit I ... 34 5.8
tr|Q4UVH5|Q4UVH5_XANC8 Cytochrome D ubiquinol oxidase subunit I ... 34 5.8
tr|B2FMC5|B2FMC5_STRMK Putative cytochrome D ubiquinol oxidase s... 34 5.8
tr|B0RS66|B0RS66_XANCB Cytochrome D ubiquinol oxidase subunit 2 ... 34 5.8
tr|B8L9C9|B8L9C9_9GAMM Cytochrome D ubiquinol oxidase subunit I ... 34 5.8
tr|A3SAZ1|A3SAZ1_9RHOB Ribonuclease, Rne/Rng family protein OS=S... 34 5.8
tr|B3RZ07|B3RZ07_TRIAD Putative uncharacterized protein OS=Trich... 34 5.8
tr|B8CD97|B8CD97_THAPS Predicted protein OS=Thalassiosira pseudo... 33 7.6
tr|B0WRV5|B0WRV5_CULQU DNA replication factor Cdt1 OS=Culex quin... 33 9.7
tr|A6FXK2|A6FXK2_9DELT Putative uncharacterized protein OS=Plesi... 33 9.9

>tr|A5CAJ1|A5CAJ1_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_029246 PE=4 SV=1
Length = 377

Score = 35.4 bits (80), Expect = 2.0
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Frame = -3

Query: 257 QMMDERRGKHVLLKRN---------SVMGSPRRKKVMTLMKVATLVWNSNWE-KQMRTLR 108
Q +RR K +LLKR+ SVMG K++TL+ + L+W S K+
Sbjct: 135 QWKRKRRDKKLLLKRSRGKGGSGASSVMGIMMFTKMLTLLNLNLLIWASESSGKESLNFL 194

Query: 107 CKTFAGKKIHFQRTLTSSKKKVR 39
KT +++ Q+ + S K K+R
Sbjct: 195 SKTQVHFQVYTQKLVRSDKYKIR 217


>tr|Q6FM64|Q6FM64_CANGA Similar to uniprot|P43597 Saccharomyces
cerevisiae YFR016c OS=Candida glabrata GN=CAGL0K10648g
PE=4 SV=1
Length = 1012

Score = 35.4 bits (80), Expect = 2.0
Identities = 19/84 (22%), Positives = 41/84 (48%)
Frame = -2

Query: 507 HSKVDVEKNCPRDGDDDTVALQEKDNHAGGGNGDKEAEALVNADTNFTRTHSVDIACPSD 328
++ + + P++ +D ++K+N GD + + + + N T V I+ D
Sbjct: 709 NNDAQTDSDLPKEKEDLNEFNEDKNNEDPVKKGDGDVLSKIMTENNETPEKRVVISILDD 768

Query: 327 LPSRYYETSQKQNEPIVTSMDVDS 256
LPSR+ ++K+ V +D++S
Sbjct: 769 LPSRHDNGNEKETHDTVPKIDLES 792


>tr|A8S394|A8S394_9CLOT Putative uncharacterized protein
OS=Clostridium bolteae ATCC BAA-613 GN=CLOBOL_06537 PE=4
SV=1
Length = 329

Score = 32.7 bits (73), Expect(2) = 2.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2

Query: 357 HSVDIACPSDLPSRYYETSQKQNEPIVTSMDVDSN 253
H +CP DL SR +E QK +EP+V + + N
Sbjct: 217 HVTSKSCPPDLESRCFEPIQKASEPVVLKISGERN 251



Score = 21.2 bits (43), Expect(2) = 2.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1

Query: 382 CRHQFHQNTFSR 347
C Q H+NTFSR
Sbjct: 193 CCLQLHRNTFSR 204


>tr|A6TJ18|A6TJ18_KLEP7 Putative uncharacterized protein
OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC
700721 / MGH 78578) GN=KPN78578_51280 PE=4 SV=1
Length = 131

Score = 35.0 bits (79), Expect = 2.6
Identities = 17/72 (23%), Positives = 39/72 (54%)
Frame = -3

Query: 257 QMMDERRGKHVLLKRNSVMGSPRRKKVMTLMKVATLVWNSNWEKQMRTLRCKTFAGKKIH 78
Q +DE R + ++ N + G+ + +++L K + +++ +RTLRC + + +H
Sbjct: 33 QSLDELRRRFTAIRGNLLDGTALDEILLSLTKTILIFFDAMKSVDLRTLRCSSGNPEWLH 92

Query: 77 FQRTLTSSKKKV 42
F L++ +K +
Sbjct: 93 FNDALSALRKSI 104


>tr|B8A0C9|B8A0C9_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 881

Score = 35.0 bits (79), Expect = 2.6
Identities = 28/106 (26%), Positives = 40/106 (37%)
Frame = -2

Query: 525 DSTKDTHSKVDVEKNCPRDGDDDTVALQEKDNHAGGGNGDKEAEALVNADTNFTRTHSVD 346
DS D + N D +D + Q+ DN GD + +V+ DT T D
Sbjct: 241 DSESDDEGSAH-QSNTTTDDEDSSDESQDSDNQLADTKGDPDKRNIVDKDTLVENT---D 296

Query: 345 IACPSDLPSRYYETSQKQNEPIVTSMDVDSNDGRAEGQTCVVEKKL 208
+ P DL ++ E+ P T + D G EKKL
Sbjct: 297 LQEPEDLDNK--ESEDLDGRPRGTEIHEDQERADENGAPITDEKKL 340


>tr|Q6C940|Q6C940_YARLI YALI0D14454p OS=Yarrowia lipolytica
GN=YALI0D14454g PE=4 SV=1
Length = 336

Score = 35.0 bits (79), Expect = 2.6
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +1

Query: 118 LICFSQLLFHTNVATFINVITFFLLGLPITEFLFNNTCLPLRSSII*IHVHGGY 279
++ F QL + F ++ F +L LP+ FL NT L L SS+ IH GG+
Sbjct: 142 IVAFKQLAPEHRIVLFRGLVKFRVLHLPLI-FLVANTLLGLLSSVYVIHAWGGF 194


>tr|A3SWB8|A3SWB8_9RHOB Ribonuclease, Rne/Rng family protein
OS=Sulfitobacter sp. NAS-14.1 GN=NAS141_05758 PE=4 SV=1
Length = 970

Score = 34.3 bits (77), Expect = 4.4
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
Frame = -2

Query: 471 DGDDDTVALQEKDNHAGGGNGDKEAEALVNAD---------TNFTRTHSVDIACPSDLPS 319
+GDD D++ G NGD +A A AD T+ T + D A P D P
Sbjct: 729 NGDDAANGENNGDSNTNGDNGDSDAPAQTEADTAGSKDDAKTDATADGASDDAKPQDKPK 788

Query: 318 RYYETSQKQNEPIVTSMDVDSNDGRAE 238
R ++K VD++ +E
Sbjct: 789 RTRSRTRKPKADAAAEATVDADAKTSE 815


>tr|Q8P8K8|Q8P8K8_XANCP Cytochrome D ubiquinol oxidase subunit I
OS=Xanthomonas campestris pv. campestris GN=cydA PE=4
SV=1
Length = 530

Score = 33.9 bits (76), Expect = 5.8
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +1

Query: 391 GLSFLVAIATSSMIVFLLEGNSVI--VTISWAVLFNIHFAMRI 513
GLSF++AI S V+++ G V +T+ W VLF I+FAM +
Sbjct: 30 GLSFMIAIMES---VYVMTGKDVWRRMTLFWGVLFGINFAMGV 69


>tr|Q4UVH5|Q4UVH5_XANC8 Cytochrome D ubiquinol oxidase subunit I
OS=Xanthomonas campestris pv. campestris (strain 8004)
GN=XC_1885 PE=4 SV=1
Length = 530

Score = 33.9 bits (76), Expect = 5.8
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +1

Query: 391 GLSFLVAIATSSMIVFLLEGNSVI--VTISWAVLFNIHFAMRI 513
GLSF++AI S V+++ G V +T+ W VLF I+FAM +
Sbjct: 30 GLSFMIAIMES---VYVMTGKDVWRRMTLFWGVLFGINFAMGV 69


>tr|B2FMC5|B2FMC5_STRMK Putative cytochrome D ubiquinol oxidase
subunit I OS=Stenotrophomonas maltophilia (strain K279a)
GN=cydA PE=4 SV=1
Length = 529

Score = 33.9 bits (76), Expect = 5.8
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +1

Query: 391 GLSFLVAIATSSMIVFLLEGNSVI--VTISWAVLFNIHFAMRI 513
GLSF+VAI S V+++ G + +T+ W VLF I+FAM +
Sbjct: 30 GLSFMVAIMES---VYVMTGKEIWRRMTLFWGVLFGINFAMGV 69