BP916653 |
Clone id |
YMU001_000090_A09 |
Library |
YMU01 |
Length |
544 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000090_A09. |
Accession |
BP916653 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2365Contig1 |
Sequence |
ATGAAGCTTATCTTCCTTACTCCTCTCAAAATCGGCGCTCTCACTTTCTTTTTTGACGAT GTCAGTGTTCTTTGAAAGTGAATCTTCTTTCCAGCAAATGTCTTGCAACGCAGTGTTCTC ATTTGCTTTTCCCAGTTGCTGTTCCACACCAATGTCGCCACTTTCATCAATGTCATCACT TTCTTCCTTCTGGGGCTCCCCATAACCGAGTTTCTTTTCAACAACACATGTTTGCCCCTC CGCTCGTCCATCATTTGAATCCACGTCCATGGAGGTTACAATTGGCTCATTTTGCTTTTG TGAAGTCTCATAGTACCTTGATGGAAGGTCAGAAGGGCAAGCAATGTCGACTGAATGTGT TCTGGTGAAATTGGTGTCTGCATTGACAAGGGCCTCAGCTTCCTTGTCGCCATTGCCACC TCCAGCATGATTGTCTTTCTCCTGGAGGGCAACAGTGTCATCGTCACCATCTCGTGGGCA GTTCTTTTCAACATCCACTTTGCTATGCGTATCTTTGGTACTGTCTACGCGGCCACCATG AGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q62598 |
Definition |
sp|Q62598|DSPP_RAT Dentin sialophosphoprotein OS=Rattus norvegicus |
Align length |
98 |
Score (bit) |
33.9 |
E-value |
0.52 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5CAJ1 |
Definition |
tr|A5CAJ1|A5CAJ1_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
83 |
Score (bit) |
35.4 |
E-value |
2.0 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916653|Adiantum capillus-veneris mRNA, clone: YMU001_000090_A09. (544 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5CAJ1|A5CAJ1_VITVI Putative uncharacterized protein OS=Vitis... 35 2.0 tr|Q6FM64|Q6FM64_CANGA Similar to uniprot|P43597 Saccharomyces c... 35 2.0 tr|A8S394|A8S394_9CLOT Putative uncharacterized protein OS=Clost... 33 2.3 tr|A6TJ18|A6TJ18_KLEP7 Putative uncharacterized protein OS=Klebs... 35 2.6 tr|B8A0C9|B8A0C9_MAIZE Putative uncharacterized protein OS=Zea m... 35 2.6 tr|Q6C940|Q6C940_YARLI YALI0D14454p OS=Yarrowia lipolytica GN=YA... 35 2.6 tr|A3SWB8|A3SWB8_9RHOB Ribonuclease, Rne/Rng family protein OS=S... 34 4.4 tr|Q8P8K8|Q8P8K8_XANCP Cytochrome D ubiquinol oxidase subunit I ... 34 5.8 tr|Q4UVH5|Q4UVH5_XANC8 Cytochrome D ubiquinol oxidase subunit I ... 34 5.8 tr|B2FMC5|B2FMC5_STRMK Putative cytochrome D ubiquinol oxidase s... 34 5.8 tr|B0RS66|B0RS66_XANCB Cytochrome D ubiquinol oxidase subunit 2 ... 34 5.8 tr|B8L9C9|B8L9C9_9GAMM Cytochrome D ubiquinol oxidase subunit I ... 34 5.8 tr|A3SAZ1|A3SAZ1_9RHOB Ribonuclease, Rne/Rng family protein OS=S... 34 5.8 tr|B3RZ07|B3RZ07_TRIAD Putative uncharacterized protein OS=Trich... 34 5.8 tr|B8CD97|B8CD97_THAPS Predicted protein OS=Thalassiosira pseudo... 33 7.6 tr|B0WRV5|B0WRV5_CULQU DNA replication factor Cdt1 OS=Culex quin... 33 9.7 tr|A6FXK2|A6FXK2_9DELT Putative uncharacterized protein OS=Plesi... 33 9.9
>tr|A5CAJ1|A5CAJ1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029246 PE=4 SV=1 Length = 377
Score = 35.4 bits (80), Expect = 2.0 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 10/83 (12%) Frame = -3
Query: 257 QMMDERRGKHVLLKRN---------SVMGSPRRKKVMTLMKVATLVWNSNWE-KQMRTLR 108 Q +RR K +LLKR+ SVMG K++TL+ + L+W S K+ Sbjct: 135 QWKRKRRDKKLLLKRSRGKGGSGASSVMGIMMFTKMLTLLNLNLLIWASESSGKESLNFL 194
Query: 107 CKTFAGKKIHFQRTLTSSKKKVR 39 KT +++ Q+ + S K K+R Sbjct: 195 SKTQVHFQVYTQKLVRSDKYKIR 217
>tr|Q6FM64|Q6FM64_CANGA Similar to uniprot|P43597 Saccharomyces cerevisiae YFR016c OS=Candida glabrata GN=CAGL0K10648g PE=4 SV=1 Length = 1012
Score = 35.4 bits (80), Expect = 2.0 Identities = 19/84 (22%), Positives = 41/84 (48%) Frame = -2
Query: 507 HSKVDVEKNCPRDGDDDTVALQEKDNHAGGGNGDKEAEALVNADTNFTRTHSVDIACPSD 328 ++ + + P++ +D ++K+N GD + + + + N T V I+ D Sbjct: 709 NNDAQTDSDLPKEKEDLNEFNEDKNNEDPVKKGDGDVLSKIMTENNETPEKRVVISILDD 768
Query: 327 LPSRYYETSQKQNEPIVTSMDVDS 256 LPSR+ ++K+ V +D++S Sbjct: 769 LPSRHDNGNEKETHDTVPKIDLES 792
>tr|A8S394|A8S394_9CLOT Putative uncharacterized protein OS=Clostridium bolteae ATCC BAA-613 GN=CLOBOL_06537 PE=4 SV=1 Length = 329
Score = 32.7 bits (73), Expect(2) = 2.3 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -2
Query: 357 HSVDIACPSDLPSRYYETSQKQNEPIVTSMDVDSN 253 H +CP DL SR +E QK +EP+V + + N Sbjct: 217 HVTSKSCPPDLESRCFEPIQKASEPVVLKISGERN 251
Score = 21.2 bits (43), Expect(2) = 2.3 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = -1
Query: 382 CRHQFHQNTFSR 347 C Q H+NTFSR Sbjct: 193 CCLQLHRNTFSR 204
>tr|A6TJ18|A6TJ18_KLEP7 Putative uncharacterized protein OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=KPN78578_51280 PE=4 SV=1 Length = 131
Score = 35.0 bits (79), Expect = 2.6 Identities = 17/72 (23%), Positives = 39/72 (54%) Frame = -3
Query: 257 QMMDERRGKHVLLKRNSVMGSPRRKKVMTLMKVATLVWNSNWEKQMRTLRCKTFAGKKIH 78 Q +DE R + ++ N + G+ + +++L K + +++ +RTLRC + + +H Sbjct: 33 QSLDELRRRFTAIRGNLLDGTALDEILLSLTKTILIFFDAMKSVDLRTLRCSSGNPEWLH 92
Query: 77 FQRTLTSSKKKV 42 F L++ +K + Sbjct: 93 FNDALSALRKSI 104
>tr|B8A0C9|B8A0C9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 881
Score = 35.0 bits (79), Expect = 2.6 Identities = 28/106 (26%), Positives = 40/106 (37%) Frame = -2
Query: 525 DSTKDTHSKVDVEKNCPRDGDDDTVALQEKDNHAGGGNGDKEAEALVNADTNFTRTHSVD 346 DS D + N D +D + Q+ DN GD + +V+ DT T D Sbjct: 241 DSESDDEGSAH-QSNTTTDDEDSSDESQDSDNQLADTKGDPDKRNIVDKDTLVENT---D 296
Query: 345 IACPSDLPSRYYETSQKQNEPIVTSMDVDSNDGRAEGQTCVVEKKL 208 + P DL ++ E+ P T + D G EKKL Sbjct: 297 LQEPEDLDNK--ESEDLDGRPRGTEIHEDQERADENGAPITDEKKL 340
>tr|Q6C940|Q6C940_YARLI YALI0D14454p OS=Yarrowia lipolytica GN=YALI0D14454g PE=4 SV=1 Length = 336
Score = 35.0 bits (79), Expect = 2.6 Identities = 20/54 (37%), Positives = 29/54 (53%) Frame = +1
Query: 118 LICFSQLLFHTNVATFINVITFFLLGLPITEFLFNNTCLPLRSSII*IHVHGGY 279 ++ F QL + F ++ F +L LP+ FL NT L L SS+ IH GG+ Sbjct: 142 IVAFKQLAPEHRIVLFRGLVKFRVLHLPLI-FLVANTLLGLLSSVYVIHAWGGF 194
>tr|A3SWB8|A3SWB8_9RHOB Ribonuclease, Rne/Rng family protein OS=Sulfitobacter sp. NAS-14.1 GN=NAS141_05758 PE=4 SV=1 Length = 970
Score = 34.3 bits (77), Expect = 4.4 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 9/87 (10%) Frame = -2
Query: 471 DGDDDTVALQEKDNHAGGGNGDKEAEALVNAD---------TNFTRTHSVDIACPSDLPS 319 +GDD D++ G NGD +A A AD T+ T + D A P D P Sbjct: 729 NGDDAANGENNGDSNTNGDNGDSDAPAQTEADTAGSKDDAKTDATADGASDDAKPQDKPK 788
Query: 318 RYYETSQKQNEPIVTSMDVDSNDGRAE 238 R ++K VD++ +E Sbjct: 789 RTRSRTRKPKADAAAEATVDADAKTSE 815
>tr|Q8P8K8|Q8P8K8_XANCP Cytochrome D ubiquinol oxidase subunit I OS=Xanthomonas campestris pv. campestris GN=cydA PE=4 SV=1 Length = 530
Score = 33.9 bits (76), Expect = 5.8 Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%) Frame = +1
Query: 391 GLSFLVAIATSSMIVFLLEGNSVI--VTISWAVLFNIHFAMRI 513 GLSF++AI S V+++ G V +T+ W VLF I+FAM + Sbjct: 30 GLSFMIAIMES---VYVMTGKDVWRRMTLFWGVLFGINFAMGV 69
>tr|Q4UVH5|Q4UVH5_XANC8 Cytochrome D ubiquinol oxidase subunit I OS=Xanthomonas campestris pv. campestris (strain 8004) GN=XC_1885 PE=4 SV=1 Length = 530
Score = 33.9 bits (76), Expect = 5.8 Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%) Frame = +1
Query: 391 GLSFLVAIATSSMIVFLLEGNSVI--VTISWAVLFNIHFAMRI 513 GLSF++AI S V+++ G V +T+ W VLF I+FAM + Sbjct: 30 GLSFMIAIMES---VYVMTGKDVWRRMTLFWGVLFGINFAMGV 69
>tr|B2FMC5|B2FMC5_STRMK Putative cytochrome D ubiquinol oxidase subunit I OS=Stenotrophomonas maltophilia (strain K279a) GN=cydA PE=4 SV=1 Length = 529
Score = 33.9 bits (76), Expect = 5.8 Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%) Frame = +1
Query: 391 GLSFLVAIATSSMIVFLLEGNSVI--VTISWAVLFNIHFAMRI 513 GLSF+VAI S V+++ G + +T+ W VLF I+FAM + Sbjct: 30 GLSFMVAIMES---VYVMTGKEIWRRMTLFWGVLFGINFAMGV 69
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