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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916654
Clone id YMU001_000090_A10
Library
Length 591
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000090_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTCCGAACCATTCAAGGGCTCAGTCCTGCGTATTAATGACTCCTCGCTAATCTCCCCATT
TTCCAATCTTCTTTCAAGTTCTTGAGTTTGCAAGATCACATCGACAAGTTCAGATGCAGT
TGTTCGTAATAAGTGTCTATGAAGGGCTGTCAAAGTCACATGATCATTGTGAAACAGATC
CAATGCTTTTGCAAAAAGCTGGAAGCTAGCATACTCCTCATCAGTTTTTTTCTGCAAGGT
GTCTGCACGATGCCGCCTGTCTTCAGAAGCTGCAGAAAAGGAAGCTTGCTTAGCTGTTTC
CCAGATTGAGAGTAGTGAAGGTCTCAAATGAGCTGCAACGGACTTGGAAAGTGTGCCAAC
ACCATCATCACCCATCCCCGCACCTTCAAGTTCAGGAAATAATTCCAATATCCGTGTTGC
AAGAAAATCCTCTGATATTGTATCCTCCTCTCTTGAACTTGCTTTTTCTGAATTACCCTT
GCCACCCCTGTTTGAGAGTGCGACTGTAGACTGATTTCCAGATTTAGATTTTCCTCCCCT
CTTTTTTCCTTTAGACCCTTTTCCAACAGTATAATCATCTTCTCCAGCTTC
■■Homology search results ■■ -
sp_hit_id A4YHE2
Definition sp|A4YHE2|TRPD_METS5 Anthranilate phosphoribosyltransferase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348)
Align length 59
Score (bit) 32.7
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916654|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_A10.
         (591 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A4YHE2|TRPD_METS5 Anthranilate phosphoribosyltransferase OS=M...    33   1.4  
sp|Q8JZV9|BDH2_MOUSE 3-hydroxybutyrate dehydrogenase type 2 OS=M...    31   4.0  
sp|Q9BUT1|BDH2_HUMAN 3-hydroxybutyrate dehydrogenase type 2 OS=H...    31   4.0  
sp|Q52E49|RSE1_MAGGR Pre-mRNA-splicing factor RSE1 OS=Magnaporth...    31   5.3  
sp|Q07WJ3|SECA_SHEFN Protein translocase subunit secA OS=Shewane...    30   7.0  
sp|Q9DBC3|FTSJ2_MOUSE FtsJ methyltransferase domain-containing p...    30   7.0  

>sp|A4YHE2|TRPD_METS5 Anthranilate phosphoribosyltransferase
           OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348)
           GN=trpD PE=3 SV=1
          Length = 343

 Score = 32.7 bits (73), Expect = 1.4
 Identities = 23/59 (38%), Positives = 34/59 (57%)
 Frame = -1

Query: 408 LELFPELEGAGMGDDGVGTLSKSVAAHLRPSLLSIWETAKQASFSAASEDRRHRADTLQ 232
           L+L   L+ AG G DG+GT++ S A  L  S  S++  AK  + +A+S  R   AD L+
Sbjct: 69  LDLRNTLDTAGTGGDGIGTINVSTATALAVS--SVFPVAKHGNRAASS--RSGSADFLE 123


>sp|Q8JZV9|BDH2_MOUSE 3-hydroxybutyrate dehydrogenase type 2 OS=Mus
           musculus GN=Bdh2 PE=2 SV=1
          Length = 245

 Score = 31.2 bits (69), Expect = 4.0
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 16/69 (23%)
 Frame = -2

Query: 494 QTGVARVIQKKQVQERRIQYQRI--------FLQHGY--------WNYFLNLKVRGWVMM 363
           QT V  V +K+Q+ +   + +RI        F+ HG         W++ +NL VR   +M
Sbjct: 53  QTRVLDVTKKRQIDQFASEIERIDVLFNVAGFVHHGTILDCEEKDWDFSMNLNVRSMFLM 112

Query: 362 VLAHFPSPL 336
           + A  P  L
Sbjct: 113 IKAFLPKML 121


>sp|Q9BUT1|BDH2_HUMAN 3-hydroxybutyrate dehydrogenase type 2 OS=Homo
           sapiens GN=BDH2 PE=1 SV=2
          Length = 245

 Score = 31.2 bits (69), Expect = 4.0
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 16/69 (23%)
 Frame = -2

Query: 494 QTGVARVIQKKQVQERRIQYQRI--------FLQHGY--------WNYFLNLKVRGWVMM 363
           QT V  V +KKQ+ +   + +R+        F+ HG         W++ +NL VR   +M
Sbjct: 53  QTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLM 112

Query: 362 VLAHFPSPL 336
           + A  P  L
Sbjct: 113 IKAFLPKML 121


>sp|Q52E49|RSE1_MAGGR Pre-mRNA-splicing factor RSE1 OS=Magnaporthe
           grisea GN=RSE1 PE=3 SV=2
          Length = 1216

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 18/66 (27%), Positives = 30/66 (45%)
 Frame = -1

Query: 432 EDFLATRILELFPELEGAGMGDDGVGTLSKSVAAHLRPSLLSIWETAKQASFSAASEDRR 253
           E+   T  L   P L    +GDDG+  +      H+R  +++ W + +  S  AA+ + R
Sbjct: 511 EEVSDTGFLSSVPTLAVQQLGDDGLVQVHPKGIRHIRNGVVNEWSSPQHRSIVAAATNER 570

Query: 252 HRADTL 235
             A  L
Sbjct: 571 QVAVAL 576


>sp|Q07WJ3|SECA_SHEFN Protein translocase subunit secA OS=Shewanella
            frigidimarina (strain NCIMB 400) GN=secA PE=3 SV=1
          Length = 906

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 5/101 (4%)
 Frame = -1

Query: 450  EEDTISEDFLATRILELFPELEGAGMGDDGVGTLSKSVAAHLRPSLLSIWETAKQASFSA 271
            ++D + E+ L  RIL  + EL  A     G   L +   A +  +L  +W+        A
Sbjct: 726  QDDNLHEETLRERILTSWSELYKAKEEMVGAQVLRQFEKAVMLQTLDGLWK-----EHLA 780

Query: 270  ASEDRR---HRADTLQKKTDEEY--ASFQLFAKALDLFHND 163
            A +  R   H     QK   +EY   SF+LF + L+   ND
Sbjct: 781  AMDHLRQGIHLRGYAQKNPKQEYKRESFELFQQLLETLKND 821


>sp|Q9DBC3|FTSJ2_MOUSE FtsJ methyltransferase domain-containing
           protein 2 OS=Mus musculus GN=Ftsjd2 PE=1 SV=1
          Length = 837

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
 Frame = -1

Query: 354 TLSKSVAAHLRPSLLSIWETAKQASFSAASEDRRHRADTLQKKTDEEYASFQ---LFAKA 184
           TLS+   A +R   L +W+   QA  + +S D + +   L K TD    S++   L AK 
Sbjct: 521 TLSEPRQAEIRKECLQLWKIPDQARVAPSSSDPKFKFFELIKDTDINIFSYKPTLLTAKT 580

Query: 183 LD 178
           L+
Sbjct: 581 LE 582
tr_hit_id A9TQ60
Definition tr|A9TQ60|A9TQ60_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 173
Score (bit) 89.4
E-value 1.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916654|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_A10.
         (591 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TQ60|A9TQ60_PHYPA Predicted protein OS=Physcomitrella paten...    89   1e-16
tr|Q5W7C7|Q5W7C7_ORYSJ Putative uncharacterized protein P0496H07...    86   2e-15
tr|B8AXB6|B8AXB6_ORYSI Putative uncharacterized protein OS=Oryza...    86   2e-15
tr|A7NZ85|A7NZ85_VITVI Chromosome chr6 scaffold_3, whole genome ...    81   4e-14
tr|Q9LX73|Q9LX73_ARATH Putative uncharacterized protein F12M12_1...    74   6e-12
tr|B6QQ92|B6QQ92_PENMA G-patch domain protein (TFIP11), putative...    40   0.077
tr|A0ZBL4|A0ZBL4_NODSP Methyl-accepting chemotaxis protein OS=No...    37   1.1  
tr|B8LVT1|B8LVT1_9EURO G-patch domain protein (TFIP11), putative...    36   1.4  
tr|Q82LE0|Q82LE0_STRAW Putative regulatory protein OS=Streptomyc...    35   3.2  
tr|Q0IG18|Q0IG18_AEDAE Putative uncharacterized protein OS=Aedes...    35   3.2  
tr|A7K461|A7K461_9VIBR 2-oxoglutarate dehydrogenase, E2 componen...    35   4.2  
tr|Q1V4N0|Q1V4N0_VIBAL Dihydrolipoamide acetyltransferase OS=Vib...    34   5.5  
tr|A7B978|A7B978_9ACTO Putative uncharacterized protein OS=Actin...    34   5.5  
tr|A6D5U3|A6D5U3_9VIBR Dihydrolipoamide acetyltransferase OS=Vib...    34   5.5  
tr|B2W1R5|B2W1R5_PYRTR Predicted protein OS=Pyrenophora tritici-...    34   5.5  
tr|Q84JT9|Q84JT9_ORYSJ Os08g0516900 protein OS=Oryza sativa subs...    33   9.4  
tr|A2YX23|A2YX23_ORYSI Putative uncharacterized protein OS=Oryza...    33   9.4  

>tr|A9TQ60|A9TQ60_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_224354 PE=4 SV=1
          Length = 814

 Score = 89.4 bits (220), Expect = 1e-16
 Identities = 65/173 (37%), Positives = 99/173 (57%), Gaps = 5/173 (2%)
 Frame = -1

Query: 504 VALSNRGGKGNSEKASSREEDTI-SEDFLATRILELFPELEGAGMGDDGVGTLSKSVAAH 328
           VA  ++G K  +   S+ +ED I + +FL ++ILE FP+LE AG+ ++G+  L K++A  
Sbjct: 462 VAGVSKGFKSGTGPNSANDEDNIFTVEFLTSKILEWFPDLESAGIVEEGI--LVKALADL 519

Query: 327 LRPSLLSIWETAKQASFSAASEDRRHRADTLQKKTDEEYASF----QLFAKALDLFHNDH 160
           L+P +++    AKQA FSA +EDRR R DTLQ K DE    F     LF+KAL+LF ++ 
Sbjct: 520 LKPKVMAAAIHAKQALFSAQAEDRRRRLDTLQHKIDEASTPFFCLPWLFSKALNLFEDNE 579

Query: 159 VXXXXXXXXXXXXXASELVDVILQTQELERRLENGEISEESLIRRTEPLNGSE 1
                          +ELVD+ L  Q  E  +++ E+   +  + TE LN S+
Sbjct: 580 KTGVLLHRHLLRTTGAELVDLFLIAQ-AEDDIDDKEVG-ITATKETELLNTSQ 630


>tr|Q5W7C7|Q5W7C7_ORYSJ Putative uncharacterized protein P0496H07.16
           (Putative uncharacterized protein) OS=Oryza sativa
           subsp. japonica GN=P0496H07.16 PE=4 SV=1
          Length = 826

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 51/153 (33%), Positives = 75/153 (49%)
 Frame = -1

Query: 495 SNRGGKGNSEKASSREEDTISEDFLATRILELFPELEGAGMGDDGVGTLSKSVAAHLRPS 316
           +  GGK  SEK      +   +D +  ++L + PELE  G  DD  G L K +++HLRP 
Sbjct: 490 AKHGGKKASEKTKEDNTNIFPDDLIEQKVLTVAPELEELGGSDDLNGPL-KLLSSHLRPM 548

Query: 315 LLSIWETAKQASFSAASEDRRHRADTLQKKTDEEYASFQLFAKALDLFHNDHVXXXXXXX 136
           L+  W   +    S  +E RR   D LQK+ DE     QL+ K+LD+F +D         
Sbjct: 549 LMDAWMKKRNTMLSENAERRRRLLDNLQKQLDEAVLDMQLYEKSLDVFEDDPATSAILHK 608

Query: 135 XXXXXXASELVDVILQTQELERRLENGEISEES 37
                  + +VD IL T   + +L+NG   E+S
Sbjct: 609 HLLRTMGAPVVDKILLTLHKDNKLKNGMDVEDS 641


>tr|B8AXB6|B8AXB6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_18219 PE=4 SV=1
          Length = 812

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 51/153 (33%), Positives = 75/153 (49%)
 Frame = -1

Query: 495 SNRGGKGNSEKASSREEDTISEDFLATRILELFPELEGAGMGDDGVGTLSKSVAAHLRPS 316
           +  GGK  SEK      +   +D +  ++L + PELE  G  DD  G L K +++HLRP 
Sbjct: 476 AKHGGKKASEKTKEDNTNIFPDDLIEQKVLTVAPELEELGGSDDLNGPL-KLLSSHLRPM 534

Query: 315 LLSIWETAKQASFSAASEDRRHRADTLQKKTDEEYASFQLFAKALDLFHNDHVXXXXXXX 136
           L+  W   +    S  +E RR   D LQK+ DE     QL+ K+LD+F +D         
Sbjct: 535 LMDAWMKKRNTMLSENAERRRRLLDNLQKQLDEAVLDMQLYEKSLDVFEDDPATSAILHK 594

Query: 135 XXXXXXASELVDVILQTQELERRLENGEISEES 37
                  + +VD IL T   + +L+NG   E+S
Sbjct: 595 HLLRTMGAPVVDKILLTLHKDNKLKNGMDVEDS 627


>tr|A7NZ85|A7NZ85_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024414001
           PE=4 SV=1
          Length = 820

 Score = 81.3 bits (199), Expect = 4e-14
 Identities = 49/156 (31%), Positives = 85/156 (54%)
 Frame = -1

Query: 504 VALSNRGGKGNSEKASSREEDTISEDFLATRILELFPELEGAGMGDDGVGTLSKSVAAHL 325
           V+ S  G K  S+K    +  +I E+++  +I ++ P+ E  G+ D  +  + + +A +L
Sbjct: 482 VSDSKTGSKKESDKMKE-DNFSIPEEWVMQKITKMVPDFEEQGVDDPEM--ILRPLADYL 538

Query: 324 RPSLLSIWETAKQASFSAASEDRRHRADTLQKKTDEEYASFQLFAKALDLFHNDHVXXXX 145
           RP LL+ W+  ++A F+  +E  +   D LQKK DE + + QL+ KALDLF +D      
Sbjct: 539 RPMLLNSWKERRRALFTENAERMKRVLDNLQKKLDESFLNMQLYVKALDLFEDDQSTSVI 598

Query: 144 XXXXXXXXXASELVDVILQTQELERRLENGEISEES 37
                    A+ +VD++L   ++  +L+NG   EES
Sbjct: 599 LHKHLLRTTAASIVDMVLLNLDVHNKLKNGIEVEES 634


>tr|Q9LX73|Q9LX73_ARATH Putative uncharacterized protein F12M12_190
           OS=Arabidopsis thaliana GN=F12M12_190 PE=4 SV=1
          Length = 804

 Score = 73.9 bits (180), Expect = 6e-12
 Identities = 46/165 (27%), Positives = 81/165 (49%)
 Frame = -1

Query: 495 SNRGGKGNSEKASSREEDTISEDFLATRILELFPELEGAGMGDDGVGTLSKSVAAHLRPS 316
           S  GGK  S KA         ++++  +I++  PE E  G   +   ++ K +A H++P 
Sbjct: 465 SKAGGKKESVKAQESNNIIPPDEWVMKKIVDSVPEFEDDGT--ENPDSILKHLADHMKPM 522

Query: 315 LLSIWETAKQASFSAASEDRRHRADTLQKKTDEEYASFQLFAKALDLFHNDHVXXXXXXX 136
           L++  +  ++  F+  ++  R   D LQKK DE + + QL+ KALDLF +D         
Sbjct: 523 LINSLKERRKKIFTENADRMRRLIDDLQKKLDESFLNMQLYEKALDLFEDDQSTAVVLHR 582

Query: 135 XXXXXXASELVDVILQTQELERRLENGEISEESLIRRTEPLNGSE 1
                 A+ + D +L   ++  +++NG   EES  +    L+ SE
Sbjct: 583 HLLRTTAATIADTLLHGLDIHNKMKNGTEVEESKTQDLVLLDSSE 627


>tr|B6QQ92|B6QQ92_PENMA G-patch domain protein (TFIP11), putative
           OS=Penicillium marneffei ATCC 18224 GN=PMAA_041440 PE=4
           SV=1
          Length = 800

 Score = 40.4 bits (93), Expect = 0.077
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
 Frame = -1

Query: 507 TVALSNRGGKGNSEKASSREEDTISEDFLATRILELFPELEGAGMGDDGVGTLSKSVAAH 328
           T A+ +RG  G   K  S+    + ++  A R++     +EG G+G+ G G ++  + A 
Sbjct: 83  TAAMQSRGRGGGVGKGDSKGGSIMGKNSFAARMMAKMGYVEGQGLGEGGRGIVN-PIEAQ 141

Query: 327 LRPSLLSIWETAKQASFSAASEDRRHRA---DTLQKKTDEE 214
            RP  + +    K+ S  A  E++R  A   + ++  +DEE
Sbjct: 142 GRPQRIGL-GAVKEKSKQAREEEKRQAAAKGEVMEDSSDEE 181


>tr|A0ZBL4|A0ZBL4_NODSP Methyl-accepting chemotaxis protein
           OS=Nodularia spumigena CCY 9414 GN=N9414_08230 PE=4 SV=1
          Length = 700

 Score = 36.6 bits (83), Expect = 1.1
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 12/74 (16%)
 Frame = -1

Query: 444 DTISEDFLATRILELFPELEGAGMGD--------DG-VGTLS---KSVAAHLRPSLLSIW 301
           +T+SE  L  ++LEL  ++EGA  GD        DG +GT+S    S+  +LR  +  + 
Sbjct: 366 ETVSEQTLQIQLLELLNQVEGAARGDLTVRAEVTDGEIGTVSDFFNSIVENLRDIVTQVK 425

Query: 300 ETAKQASFSAASED 259
           +TA Q + +  +E+
Sbjct: 426 QTATQVNSAIGAEE 439


>tr|B8LVT1|B8LVT1_9EURO G-patch domain protein (TFIP11), putative
           OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_075840 PE=4
           SV=1
          Length = 794

 Score = 36.2 bits (82), Expect = 1.4
 Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
 Frame = -1

Query: 516 NQSTVALSNRGGKGNSEKASSREEDTISEDFLATRILELFPELEGAGMGDDGVGTLSKSV 337
           N +  A     G+G      ++    + +   A R++     +EG G+G DG G ++  +
Sbjct: 73  NTTPTATMQSRGRGGGGGIDNKGGSIMGKSSFAARMMAKMGYVEGQGLGQDGRGIVN-PI 131

Query: 336 AAHLRPSLLSIWETAKQASFSAASEDRRH---RADTLQKKTDEE 214
            A  RP  + +    K+ S  A  E++R    R + ++  +DEE
Sbjct: 132 EAQGRPQRIGL-GAVKEKSKQAREEEKRQAAARGEIIEDSSDEE 174


>tr|Q82LE0|Q82LE0_STRAW Putative regulatory protein OS=Streptomyces
           avermitilis GN=SAV2070 PE=4 SV=1
          Length = 557

 Score = 35.0 bits (79), Expect = 3.2
 Identities = 25/70 (35%), Positives = 30/70 (42%)
 Frame = -1

Query: 462 ASSREEDTISEDFLATRILELFPELEGAGMGDDGVGTLSKSVAAHLRPSLLSIWETAKQA 283
           A S E D      LA  +LE   +   AG+ DDG  TL  S A H    L    E A+ A
Sbjct: 383 AVSSEHDGSEAGLLADTLLEAVRDPLSAGLNDDGRLTLGVSAAVHSAEGLRGALEEARHA 442

Query: 282 SFSAASEDRR 253
              AA+   R
Sbjct: 443 RRVAAARPGR 452


>tr|Q0IG18|Q0IG18_AEDAE Putative uncharacterized protein OS=Aedes
           aegypti GN=AAEL003536 PE=4 SV=1
          Length = 777

 Score = 35.0 bits (79), Expect = 3.2
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
 Frame = -1

Query: 489 RGGKGNSEKASSREEDTISEDFLATR--ILELFPELE-----GAGMGDDGVGTLSKSVAA 331
           RG KGN    S  ++D  S      +  ++EL    E      AG+  +G+  LSK +A 
Sbjct: 447 RGQKGN---VSDSDDDMPSGGKKGGKDAVIELITTKEIAKVLEAGLEPEGLEDLSKQLAQ 503

Query: 330 HLRPSL----LSIWETAKQASFSAASEDRRHRADTLQKKTDEEYASFQLFAKALDLFHND 163
           H  P      L+      + S   ++++RR    +LQ K +  Y   +L+ K + LF  D
Sbjct: 504 HYYPQFSKLALAKAHQLYEISLHQSNQNRRQTHASLQDKLNNLYNDIRLYEKGIKLFPAD 563