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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916671
Clone id YMU001_000090_C03
Library
Length 326
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000090_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GCACAAGCACAAAAGCGAATCTAAAAATCTCTGTTATTTTTACAATTGGTAAAGCACCAC
AGTCAACGGCTTTTCCAAACCTCAGCATTCAAAAGTAAAGCTGCCCAGTGTACGTCAGCA
TATTCATACTTACTATCACGCCAACACCTGCTAAATGTGCCTGGTTTCACACCGCAAATC
TTGTTGCAAAATGCGTTACCTCTGATTTGGGTTCAGGCTTGCTCTTCCTCTCCTTTTCTA
GTCCAAAATCATGGGACGTCATCACTTTGAGACATTACCCCCCTTTAAAGTAGAGTAACC
GCCAATACTTTAGTAGCCACCGTCTC
■■Homology search results ■■ -
sp_hit_id Q9JWJ8
Definition sp|Q9JWJ8|Y341_NEIMA UPF0102 protein NMA0341 OS=Neisseria meningitidis serogroup A
Align length 65
Score (bit) 31.6
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916671|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_C03.
         (326 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9JWJ8|Y341_NEIMA UPF0102 protein NMA0341 OS=Neisseria mening...    32   1.3  
sp|A1KWG5|Y2069_NEIMF UPF0102 protein NMC2069 OS=Neisseria menin...    32   1.3  
sp|Q9Y1U3|SIXC_MESMA Toxin BmKITc OS=Mesobuthus martensii PE=3 SV=2    31   2.2  
sp|P82812|SIX2_BUTSI Insect toxin BsIT2 OS=Buthus sindicus PE=1 ...    31   2.2  
sp|Q9JXE2|Y2089_NEIMB UPF0102 protein NMB2089 OS=Neisseria menin...    30   2.9  
sp|A9M478|Y2054_NEIM0 UPF0102 protein NMCC_2054 OS=Neisseria men...    29   6.5  
sp|Q8T3T0|SIXA1_MESMA Depressant insect toxin BmK ITa1 OS=Mesobu...    29   8.5  
sp|P24336|SIX2_BUTJU Beta-insect depressant toxin BjIT2 OS=Butho...    29   8.5  

>sp|Q9JWJ8|Y341_NEIMA UPF0102 protein NMA0341 OS=Neisseria
           meningitidis serogroup A GN=NMA0341 PE=3 SV=1
          Length = 115

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = +1

Query: 31  LLFLQLVKHHSQRLFQTSAFK---SKAAQCTSAYSYLLSRQHLLNVPGFTPQILLQNALP 201
           +LF++ VK+   R F  +A+    SK  +   +  Y L +  L NVP     +L++ + P
Sbjct: 48  ILFVE-VKYRKNRQFGGAAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIEGSRP 106

Query: 202 LIWVQ 216
             W+Q
Sbjct: 107 PEWIQ 111


>sp|A1KWG5|Y2069_NEIMF UPF0102 protein NMC2069 OS=Neisseria
           meningitidis serogroup C / serotype 2a (strain ATCC
           700532 / FAM18) GN=NMC2069 PE=3 SV=1
          Length = 115

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = +1

Query: 31  LLFLQLVKHHSQRLFQTSAFK---SKAAQCTSAYSYLLSRQHLLNVPGFTPQILLQNALP 201
           +LF++ VK+   R F  +A+    SK  +   +  Y L +  L NVP     +L++ + P
Sbjct: 48  ILFVE-VKYRKNRQFGGAAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIEGSRP 106

Query: 202 LIWVQ 216
             W+Q
Sbjct: 107 PEWIQ 111


>sp|Q9Y1U3|SIXC_MESMA Toxin BmKITc OS=Mesobuthus martensii PE=3 SV=2
          Length = 85

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -1

Query: 200 GNAFCNKICGVKPGTFSRCWRDSKYEYADVHWAALLLNAEVWK 72
           GN FC+K+C    G++  CW      +    W   L + E WK
Sbjct: 38  GNDFCDKVCKKSGGSYGYCW-----TWGLACWCEGLPDNEKWK 75


>sp|P82812|SIX2_BUTSI Insect toxin BsIT2 OS=Buthus sindicus PE=1
           SV=1
          Length = 61

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -1

Query: 197 NAFCNKICGVKPGTFSRCWRDSKYEYADVHWAALLLNAEVWK 72
           N +CN +C    G++  CW      Y    W   L NA+ WK
Sbjct: 18  NVYCNSMCKSLGGSYGYCW-----TYGLACWCEGLPNAKRWK 54


>sp|Q9JXE2|Y2089_NEIMB UPF0102 protein NMB2089 OS=Neisseria
           meningitidis serogroup B GN=NMB2089 PE=3 SV=1
          Length = 115

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = +1

Query: 31  LLFLQLVKHHSQRLFQTSAFK---SKAAQCTSAYSYLLSRQHLLNVPGFTPQILLQNALP 201
           +LF++ VK+   R F   A+    SK  +   +  Y L +  L NVP     +L++ + P
Sbjct: 48  ILFVE-VKYRKNRQFGGVAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIEGSRP 106

Query: 202 LIWVQ 216
             W+Q
Sbjct: 107 PEWIQ 111


>sp|A9M478|Y2054_NEIM0 UPF0102 protein NMCC_2054 OS=Neisseria
           meningitidis serogroup C (strain 053442) GN=NMCC_2054
           PE=3 SV=1
          Length = 115

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = +1

Query: 31  LLFLQLVKHHSQRLFQTSAFK---SKAAQCTSAYSYLLSRQHLLNVPGFTPQILLQNALP 201
           +LF++ VK+   R F   A+    SK  +   +  Y L +  L NVP     +L++   P
Sbjct: 48  ILFVE-VKYRKNRQFGGVAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIEGNRP 106

Query: 202 LIWVQ 216
             W+Q
Sbjct: 107 PEWIQ 111


>sp|Q8T3T0|SIXA1_MESMA Depressant insect toxin BmK ITa1
           OS=Mesobuthus martensii PE=2 SV=1
          Length = 85

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = -1

Query: 200 GNAFCNKICGVKPGTFSRCWRDSKYEYADVHWAALLLNAEVWKS 69
           GN  CNK CG    ++  CW      +    W   L + + WKS
Sbjct: 38  GNEGCNKECGAYGASYGYCW-----TWGLACWCEGLPDDKTWKS 76


>sp|P24336|SIX2_BUTJU Beta-insect depressant toxin BjIT2 OS=Buthotus
           judaicus PE=1 SV=1
          Length = 85

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 16/46 (34%), Positives = 19/46 (41%)
 Frame = -1

Query: 206 IRGNAFCNKICGVKPGTFSRCWRDSKYEYADVHWAALLLNAEVWKS 69
           I GN  C K C    G+F  CW      +    W   L +A  WKS
Sbjct: 36  IIGNEGCRKECVAHGGSFGYCW-----TWGLACWCENLPDAVTWKS 76
tr_hit_id Q2BZL8
Definition tr|Q2BZL8|Q2BZL8_9GAMM Putative UDP-glucose 4-epimerase OS=Photobacterium sp. SKA34
Align length 46
Score (bit) 33.5
E-value 5.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916671|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_C03.
         (326 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2BZL8|Q2BZL8_9GAMM Putative UDP-glucose 4-epimerase OS=Photo...    33   5.4  

>tr|Q2BZL8|Q2BZL8_9GAMM Putative UDP-glucose 4-epimerase
           OS=Photobacterium sp. SKA34 GN=SKA34_03735 PE=3 SV=1
          Length = 339

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -1

Query: 182 KICGVKPGTFSRCWRDSKYEYADVHWAALLLNAEVWKSR*LWCFTN 45
           +I   +PG  + CW D     A++HW A L   ++ K    W  TN
Sbjct: 286 RIAPRRPGDIAECWADPAKAKAELHWEAKLTLDDMTKDTWRWQSTN 331