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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916676
Clone id YMU001_000090_C08
Library
Length 465
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000090_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AACCTTAAATTCTTTAGATTTCTGTGACAGTAAAAGGGCATTTACATTTAAGATGGACAG
AATGCTGTTCACTAGAAGAAATGCCATTTACAAAAGGACTGAGATTATCATTGCAGTCAA
TTTCGTTTTTCTGAACTCTCAGACCATTAATATCCTCTCCTTAGTTACAATAGCCTATTT
CCCTTGCAATATATAGCACTGTCAAAACCAAATCTAACCTACCATCAACGATTCCACCGT
GTACCAATTTTCAACAAGAAGCTTTGCATAAGCATGACAAACCCAAAGAGTCGACCACAG
AAATGCCACCTCATTCCTCTCTGGGAAACCACCATCACTGGCATCCCACATGCTCATATG
CTTCTCTTCGAATGCTGCACTTGTGATGCCTCCGAAAAAGGGGGTTCTCTCGTGACCCAG
AAAACGTGGAGCTGACATCTCACATCTCACCCTTTCTCACCATTG
■■Homology search results ■■ -
sp_hit_id O13918
Definition sp|O13918|ZHF1_SCHPO Zinc homeostasis factor 1 OS=Schizosaccharomyces pombe
Align length 44
Score (bit) 31.6
E-value 1.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916676|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_C08.
         (465 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O13918|ZHF1_SCHPO Zinc homeostasis factor 1 OS=Schizosaccharo...    32   1.8  
sp|A6LN73|MURB_THEM4 UDP-N-acetylenolpyruvoylglucosamine reducta...    31   2.3  
sp|P0C6Q7|TAGA_VIBCH ToxR-activated gene A lipoprotein OS=Vibrio...    30   4.0  
sp|A5F398|TAGA_VIBC3 ToxR-activated gene A lipoprotein OS=Vibrio...    30   4.0  
sp|P26798|INO2_YEAST Protein INO2 OS=Saccharomyces cerevisiae GN...    30   5.1  
sp|Q9HM08|TOP1_THEAC DNA topoisomerase 1 OS=Thermoplasma acidoph...    29   8.7  
sp|Q6BK07|STU1_DEBHA Protein STU1 OS=Debaryomyces hansenii GN=ST...    29   8.7  
sp|P51862|ROM2_YEAST RHO1 GDP-GTP exchange protein 2 OS=Saccharo...    29   8.7  

>sp|O13918|ZHF1_SCHPO Zinc homeostasis factor 1
           OS=Schizosaccharomyces pombe GN=zhf1 PE=2 SV=3
          Length = 387

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +3

Query: 210 KSNLPSTIPP-CTNFQQEALHKHDKPKESTTEMPP-HSSLGNHH 335
           +S LPSTI   C   QQE  H H +  +S TE  P  S  GNH+
Sbjct: 158 ESVLPSTIVHRCNTSQQEVSHTHTQVADSATESSPLLSYTGNHN 201


>sp|A6LN73|MURB_THEM4 UDP-N-acetylenolpyruvoylglucosamine reductase
           OS=Thermosipho melanesiensis (strain BI429 / DSM 12029)
           GN=murB PE=3 SV=1
          Length = 292

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +2

Query: 14  LDFCDSKRAFTFKMDRMLFTRRNAIYKRTE--IIIAVNFVFLNSQTINILS 160
           +D  D K+        M F+ RN+I+K  E  II+ V F  +   + NI S
Sbjct: 145 VDVYDGKKVLRLDRTEMKFSYRNSIFKENEDLIILRVGFRIIKGDSYNIFS 195


>sp|P0C6Q7|TAGA_VIBCH ToxR-activated gene A lipoprotein OS=Vibrio
           cholerae GN=tagA PE=3 SV=1
          Length = 1002

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = -1

Query: 372 FEEKHMSMWDASDGGFPERNEVAFLWSTLWVCHAYAKLLVENW 244
           F +K+  +WDA  GG+  +N +    S   + H Y   ++++W
Sbjct: 490 FMDKYTYLWDAMSGGYDHQNGII---SRYTLHHPYVARIIQDW 529


>sp|A5F398|TAGA_VIBC3 ToxR-activated gene A lipoprotein OS=Vibrio
           cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 /
           O395) GN=tagA PE=3 SV=2
          Length = 1002

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = -1

Query: 372 FEEKHMSMWDASDGGFPERNEVAFLWSTLWVCHAYAKLLVENW 244
           F +K+  +WDA  GG+  +N +    S   + H Y   ++++W
Sbjct: 490 FMDKYTYLWDAMSGGYDHQNGII---SRYTLHHPYVARIIQDW 529


>sp|P26798|INO2_YEAST Protein INO2 OS=Saccharomyces cerevisiae
           GN=INO2 PE=1 SV=1
          Length = 304

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +3

Query: 237 PCTNFQQEALHKHDKPKESTTEMPPHSSLGNHHHWHPTCSYASLRM 374
           P +N  +   +  D P E TT   PH  +GN H+  P  S   +R+
Sbjct: 175 PHSNTGELPTNTADVPTEFTTREGPHQPIGNDHYNPPPFSVPEIRI 220


>sp|Q9HM08|TOP1_THEAC DNA topoisomerase 1 OS=Thermoplasma
           acidophilum GN=topA PE=3 SV=1
          Length = 770

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 350 CGMPVMVVSQRGMRWHFC 297
           CG P++ +S+ G +W FC
Sbjct: 722 CGAPILALSRNGRKWKFC 739


>sp|Q6BK07|STU1_DEBHA Protein STU1 OS=Debaryomyces hansenii GN=STU1
           PE=3 SV=2
          Length = 1529

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +3

Query: 195 STVKTKSNLPSTIPPCTNFQQEALHKHDKPKESTTEMPPHSSLG 326
           S  +  S + ST  PC     + L KHDKP+ ST +    S LG
Sbjct: 661 SISRPSSRINSTSSPCPP-DNDYLQKHDKPQFSTLDSGKFSRLG 703


>sp|P51862|ROM2_YEAST RHO1 GDP-GTP exchange protein 2
           OS=Saccharomyces cerevisiae GN=ROM2 PE=1 SV=1
          Length = 1356

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 17/58 (29%), Positives = 30/58 (51%)
 Frame = +3

Query: 207 TKSNLPSTIPPCTNFQQEALHKHDKPKESTTEMPPHSSLGNHHHWHPTCSYASLRMLH 380
           T  N+ S+    T+  ++A  K+D      ++  PH    +HHH H + S++SL  +H
Sbjct: 296 TLKNIASSFQSKTSNSRKATQKYDITSNPFSD--PHH---HHHHHHSSNSHSSLNNVH 348
tr_hit_id A8NYS9
Definition tr|A8NYS9|A8NYS9_COPC7 Putative uncharacterized protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003)
Align length 46
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916676|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_C08.
         (465 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8NYS9|A8NYS9_COPC7 Putative uncharacterized protein OS=Copri...    35   1.4  
tr|Q23ZG9|Q23ZG9_TETTH Putative uncharacterized protein OS=Tetra...    33   5.4  
tr|B4NK14|B4NK14_DROWI GK13919 OS=Drosophila willistoni GN=GK139...    33   7.0  
tr|A8N5Y8|A8N5Y8_COPC7 Predicted protein OS=Coprinopsis cinerea ...    33   7.0  
tr|B5XF19|B5XF19_SALSA Carbonyl reductase 1 OS=Salmo salar GN=DH...    33   7.2  
tr|Q89UW9|Q89UW9_BRAJA Sensor protein OS=Bradyrhizobium japonicu...    33   7.2  
tr|A4TYL1|A4TYL1_9PROT Hydrogenase accessory protein HypB OS=Mag...    33   9.1  
tr|A4GL45|A4GL45_9PROT Ni2+-binding GTPase OS=Magnetospirillum g...    33   9.1  
tr|B4LRV7|B4LRV7_DROVI GJ12041 OS=Drosophila virilis GN=GJ12041 ...    33   9.1  

>tr|A8NYS9|A8NYS9_COPC7 Putative uncharacterized protein
           OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
           9003) GN=CC1G_01424 PE=4 SV=1
          Length = 956

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 195 STVKTKSNLPSTIPPCTNFQQEALHKHDKPKESTTEMPPHSSLGNH 332
           ST+K + ++ S     T+F   + +KH  P  S+  + P SS+ NH
Sbjct: 672 STIKRRLSVSSNTTNRTSFSASSAYKHHHPNHSSLSLDPSSSISNH 717


>tr|Q23ZG9|Q23ZG9_TETTH Putative uncharacterized protein
           OS=Tetrahymena thermophila SB210 GN=TTHERM_00786940 PE=4
           SV=1
          Length = 931

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +3

Query: 177 ISLAIYSTVKTKSNLPSTIPPCTNFQQEALHKHDKPKESTTEMPPHSSLGNHHHW 341
           +S A  ST    +NL + +P  +NF QEA    +  K  T E+ P  +L  +  W
Sbjct: 711 MSEADLSTKYQTTNLSNKLPQSSNFSQEAFKNCELKKTLTEELYPQRNLDENESW 765


>tr|B4NK14|B4NK14_DROWI GK13919 OS=Drosophila willistoni GN=GK13919
           PE=4 SV=1
          Length = 426

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 252 QQEALHKHDKPKESTTEMPPHSSLGNHHHWH 344
           Q +  H H +P  +  ++ PHS   NHHH H
Sbjct: 203 QTQHHHHHHQPATTMMDLHPHSQYQNHHHHH 233


>tr|A8N5Y8|A8N5Y8_COPC7 Predicted protein OS=Coprinopsis cinerea
           (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_01919 PE=4
           SV=1
          Length = 400

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 19/49 (38%), Positives = 23/49 (46%)
 Frame = +3

Query: 174 PISLAIYSTVKTKSNLPSTIPPCTNFQQEALHKHDKPKESTTEMPPHSS 320
           P+S    +T +T     STIP  T    EA      P ES+TE PP  S
Sbjct: 90  PVSSTEGATTETSPAATSTIPSETTSSTEAASSTAAPTESSTEAPPEPS 138


>tr|B5XF19|B5XF19_SALSA Carbonyl reductase 1 OS=Salmo salar GN=DHCA
           PE=2 SV=1
          Length = 276

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
 Frame = -1

Query: 444 CEMSAPRFLGHERTPFFGGITSAAFEEKHMSMWDASDGGFPERNEVAF---LWSTLWVCH 274
           C+  + + L +     +GG+         MS  + +   F E+ EV      W TLWVCH
Sbjct: 64  CDQGSAKQLSNFLQKTYGGL-DVLINNAGMSFKNDATEPFGEQAEVTMRTNFWGTLWVCH 122

Query: 273 AYAKLLVEN 247
           A   LL  N
Sbjct: 123 ALLPLLRPN 131


>tr|Q89UW9|Q89UW9_BRAJA Sensor protein OS=Bradyrhizobium japonicum
           GN=bll1290 PE=4 SV=1
          Length = 618

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 14/61 (22%), Positives = 27/61 (44%)
 Frame = -1

Query: 402 PFFGGITSAAFEEKHMSMWDASDGGFPERNEVAFLWSTLWVCHAYAKLLVENWYTVESLM 223
           PF G      F+ + +  W+  +   P  +EV F   T W  + +   ++     V++LM
Sbjct: 301 PFSGDNVRPIFDWRQLKRWNVDEANLPPGSEVRFRQPTFWEQYYWHSAIIAGVVLVQALM 360

Query: 222 V 220
           +
Sbjct: 361 I 361


>tr|A4TYL1|A4TYL1_9PROT Hydrogenase accessory protein HypB
           OS=Magnetospirillum gryphiswaldense GN=hypB PE=4 SV=1
          Length = 299

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 228 TIPPCTNFQQEALHKHDKPKESTTEMPPHSSLGNHHHWH 344
           T+  C + Q E  H HD P +       H   G+HHH H
Sbjct: 3   TVCGCGDAQVEHTHDHDHPHDHDHPHDHHHDHGHHHHHH 41


>tr|A4GL45|A4GL45_9PROT Ni2+-binding GTPase OS=Magnetospirillum
           gryphiswaldense MSR-1 GN=hypB PE=4 SV=1
          Length = 299

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 228 TIPPCTNFQQEALHKHDKPKESTTEMPPHSSLGNHHHWH 344
           T+  C + Q E  H HD P +       H   G+HHH H
Sbjct: 3   TVCGCGDAQVEHTHDHDHPHDHDHPHDHHHDHGHHHHHH 41


>tr|B4LRV7|B4LRV7_DROVI GJ12041 OS=Drosophila virilis GN=GJ12041
           PE=4 SV=1
          Length = 416

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
 Frame = +3

Query: 60  ECCSLEEMPFTKGLRLSLQSISFF*TLRPLISSP*LQ*PISLAIYSTVKTKSNLPSTIPP 239
           E C L+   F   L   +  +  +  + PL+    L   I++A++ + +  S      P 
Sbjct: 100 EICVLDREMFNSKLLDMINFVLLY--VMPLLVMTVLYSKIAIALWRSSRGLS------PH 151

Query: 240 CTNFQQEALHKHDKPKESTTE---MPPHSSLGNHHHWHP 347
            T  QQ+   +H + ++   +   M  H+S+ +HHH HP
Sbjct: 152 VTQHQQQQQQQHQQQQQQAIQENSMSLHNSMYHHHHHHP 190