BP916677
Clone id YMU001_000090_C09
Library
Length 595
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000090_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTAGGATTTTCTCATCCTTAGGCACAACATCTATAACTATGTAAGTTGGCTTTGGTTCCT
ATCTTGGAAGTGCCAGATTGATTTTCTTTGCGTTCTCAGGTCCATCGTAAGATTTCCTTG
GTTCTTTTAGCTCTCTCATTGGTTGTTGGACCACTATCCTTCAACCTTGGAGTGTATAAC
TTTTTGTAGTGTGAGGGAACACTAATGGCCTCACTCCCCTTTTTCTCTTTTGTTTCTATT
TTTGTAGTCTAGACTTCCTTGAGTGTTCGCTTTAATTCTCAGTATTTGGCTTTGATTTCT
ATTTAGTACATCTTCTATGTTGATTTTTGGTCTTTCTGTTTCATTTTAGGTTTCTTCTTT
GCCTTCTTGGGCTTTTCCTTGTTGGGTTCCACTATTCGCACTAAATAGAAACCCGTTATT
TTGTCCTTAATACAATCCTCTGTCCCAAATAGTCTAAGGTAATGCTATTTTCTTGTTACT
TTTGGCATGCATTTCAGTAAGTTTTTGTTCCTTTTGTTTCTATATCTCCTTTGCTAGTTC
CCTTTTTGGTTTGAAAAGTCAAAATAGACTTCTTCCCTGTTTTATTTCAGCATCC
■■Homology search results ■■ -
sp_hit_id Q0G9G1
Definition sp|Q0G9G1|YCF1_LIRTU Putative membrane protein ycf1 OS=Liriodendron tulipifera
Align length 33
Score (bit) 32.3
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916677|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_C09.
(595 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q0G9G1|YCF1_LIRTU Putative membrane protein ycf1 OS=Liriodend... 32 1.9
sp|Q06GT8|YCF1_DRIGR Putative membrane protein ycf1 OS=Drimys gr... 32 3.2

>sp|Q0G9G1|YCF1_LIRTU Putative membrane protein ycf1 OS=Liriodendron
tulipifera GN=ycf1 PE=3 SV=1
Length = 1835

Score = 32.3 bits (72), Expect = 1.9
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -2

Query: 306 LNRNQSQILRIKANTQGSLDYKNRNKREKGE*G 208
+NRNQ + LR+ +N + L+ +NRN+ EK + G
Sbjct: 1513 INRNQKKDLRLSSNQKEYLELENRNQEEKEQLG 1545


>sp|Q06GT8|YCF1_DRIGR Putative membrane protein ycf1 OS=Drimys
granadensis GN=ycf1 PE=3 SV=1
Length = 1857

Score = 31.6 bits (70), Expect = 3.2
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = -2

Query: 345 NETERPKINIEDVLNRNQSQILRIKANTQGSLDYKNRNKREK 220
N +E I+ + +N NQ + LRI +N + L+ +NRNK ++
Sbjct: 1513 NISENKNISENENINGNQKKDLRISSNQKEYLELENRNKEKE 1554


tr_hit_id Q4EBK5
Definition tr|Q4EBK5|Q4EBK5_9RICK Putative uncharacterized protein OS=Wolbachia endosymbiont of Drosophila ananassae
Align length 33
Score (bit) 34.3
E-value 5.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916677|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_C09.
(595 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4EBK5|Q4EBK5_9RICK Putative uncharacterized protein OS=Wolba... 34 5.6
tr|Q4E7H1|Q4E7H1_9RICK Putative uncharacterized protein (Fragmen... 34 5.6
tr|Q23NK5|Q23NK5_TETTH Putative uncharacterized protein OS=Tetra... 34 7.3
tr|A0RF08|A0RF08_BACAH Acetyltransferase, GNAT family OS=Bacillu... 33 9.4

>tr|Q4EBK5|Q4EBK5_9RICK Putative uncharacterized protein
OS=Wolbachia endosymbiont of Drosophila ananassae
GN=WwAna1729 PE=4 SV=1
Length = 956

Score = 34.3 bits (77), Expect = 5.6
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = -2

Query: 312 DVLNRNQSQILRIKANTQGSLDYKNRNKREKGE 214
D+LNR+QS++ +I N QG + + + NK+EKG+
Sbjct: 532 DLLNRDQSELDKIIFNKQGYVFFPDENKQEKGK 564


>tr|Q4E7H1|Q4E7H1_9RICK Putative uncharacterized protein (Fragment)
OS=Wolbachia endosymbiont of Drosophila simulans
GN=WwSim0542 PE=4 SV=1
Length = 593

Score = 34.3 bits (77), Expect = 5.6
Identities = 15/33 (45%), Positives = 25/33 (75%)
Frame = -2

Query: 312 DVLNRNQSQILRIKANTQGSLDYKNRNKREKGE 214
D+LNR+QS++ +I N QG + + + NK+EKG+
Sbjct: 169 DLLNRDQSELDKIIFNKQGYVFFPDENKQEKGK 201


>tr|Q23NK5|Q23NK5_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_00752150 PE=4
SV=1
Length = 5278

Score = 33.9 bits (76), Expect = 7.3
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = -2

Query: 405 FSANSGTQQGKAQEGKEET*NETERPKINIEDVLNRNQSQILRIKANTQGSLDYKNRNKR 226
F++ QQ K K + ++ K N+ V N NQ + RI+ +T L+ N+ +
Sbjct: 3402 FNSIKSDQQTKVNLSKSQMRKNSQEFKPNLLGVNNENQIEPQRIRKSTDAYLEAANQKNQ 3461

Query: 225 EKGE*GH 205
+KG+ G+
Sbjct: 3462 KKGDLGN 3468


>tr|A0RF08|A0RF08_BACAH Acetyltransferase, GNAT family OS=Bacillus
thuringiensis (strain Al Hakam) GN=BALH_2514 PE=4 SV=1
Length = 141

Score = 33.5 bits (75), Expect = 9.4
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -3

Query: 185 KKLYTPRLKDSGPTTNERAKRTKEILRWT*ERKE 84
KK+YT +L+D P +E+ KR + + W ERKE
Sbjct: 6 KKMYTYKLQDEKPICSEKLKRLYDSVGWWPERKE 39