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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916681
Clone id YMU001_000090_D01
Library
Length 582
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000090_D01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CACACCATCAACAATGCAATGGAAACCAAAGCAAAAAGTCTATCAACCAAAGTTTCCATC
AGAAAAAAGCATCCAAAAGAAGCCAAAGAATTTCAAGCAGGTGTTGGTATCCAAAGAGCA
CATCCAAGTCAAAGACCCATTTTGGATACATGAAACACGGGTTCAACCACAACAATAAAA
GGTGACAGGGTGGATAGCATCAAATGAGTCGATCACTGCTCAAGGCTACTTCCAAGGAAA
CACTAATGTTTGGGCCAAAAAGCCTAAAGTAACAGCCTAGACCTACCCACCTAAACCAAC
GAGTTCTACAAGGGACAAGCCGCACTATCAACGGAATAAAAAATACTCAGGCAAGCGAAA
TGACACCAACAAAAGGCAAACAAAAAGACCTTCCAAGTGAGCAACGCGAAAACTTTGGGT
AACCGAAATCAAACTTCAACGAAGATACCTAACACAAACAGGTGAATTAGCGGATGATTC
CAGTGAAGCTACTTGAAGCACAAGGATTCTATGAAGGTAACACCCAAATATGGTTACCCA
AAGTAGTTGCTCAACCTAGAGCCACCATTCGCGGNCGCGAAT
■■Homology search results ■■ -
sp_hit_id Q5NVN8
Definition sp|Q5NVN8|FOX1A_PONAB Fox-1 homolog A OS=Pongo abelii
Align length 51
Score (bit) 33.9
E-value 0.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916681|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_D01.
         (582 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5NVN8|FOX1A_PONAB Fox-1 homolog A OS=Pongo abelii GN=FOX1 PE...    34   0.60 
sp|Q9NWB1|FOX1A_HUMAN Fox-1 homolog A OS=Homo sapiens GN=FOX1 PE...    34   0.60 
sp|Q95KI0|FOX1A_MACFA Fox-1 homolog A OS=Macaca fascicularis GN=...    33   0.79 
sp|Q14669|TRIPC_HUMAN Probable E3 ubiquitin-protein ligase TRIP1...    31   3.9  
sp|P06909|CFAH_MOUSE Complement factor H OS=Mus musculus GN=Cfh ...    31   3.9  
sp|Q60591|NFAC2_MOUSE Nuclear factor of activated T-cells, cytop...    31   5.1  
sp|Q17QD3|FOX1A_BOVIN Fox-1 homolog A OS=Bos taurus GN=FOX1 PE=2...    31   5.1  
sp|Q5HYK7|SH319_HUMAN SH3 domain-containing protein 19 OS=Homo s...    30   6.7  
sp|Q9LUQ6|RL192_ARATH 60S ribosomal protein L19-2 OS=Arabidopsis...    30   8.7  
sp|Q6ZMI0|KLRAQ_HUMAN KLRAQ motif-containing protein 1 OS=Homo s...    30   8.8  

>sp|Q5NVN8|FOX1A_PONAB Fox-1 homolog A OS=Pongo abelii GN=FOX1 PE=2
           SV=1
          Length = 382

 Score = 33.9 bits (76), Expect = 0.60
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +3

Query: 276 PRPTHLNQRVLQGTSRTINGIKNTQASEMTPTKGKQKDLPSEQRENFG*PK 428
           P  TH  Q     +++T++G   TQ  +  PT G+ +  PSE  EN   PK
Sbjct: 68  PAQTHSEQSPADTSAQTVSGTA-TQTDDAAPTDGQPQTQPSENTENKSQPK 117


>sp|Q9NWB1|FOX1A_HUMAN Fox-1 homolog A OS=Homo sapiens GN=FOX1 PE=1
           SV=2
          Length = 397

 Score = 33.9 bits (76), Expect = 0.60
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +3

Query: 276 PRPTHLNQRVLQGTSRTINGIKNTQASEMTPTKGKQKDLPSEQRENFG*PK 428
           P  TH  Q     +++T++G   TQ  +  PT G+ +  PSE  EN   PK
Sbjct: 68  PAQTHSEQSPADTSAQTVSGTA-TQTDDAAPTDGQPQTQPSENTENKSQPK 117


>sp|Q95KI0|FOX1A_MACFA Fox-1 homolog A OS=Macaca fascicularis
           GN=FOX1 PE=2 SV=1
          Length = 376

 Score = 33.5 bits (75), Expect = 0.79
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +3

Query: 276 PRPTHLNQRVLQGTSRTINGIKNTQASEMTPTKGKQKDLPSEQRENFG*PK 428
           P  TH  Q      ++T++G   TQ  +  PT G+ +  PSE  EN   PK
Sbjct: 70  PAQTHSEQSPADTNAQTVSGTA-TQTDDAAPTDGQPQTQPSENTENKSQPK 119


>sp|Q14669|TRIPC_HUMAN Probable E3 ubiquitin-protein ligase TRIP12
           OS=Homo sapiens GN=TRIP12 PE=1 SV=1
          Length = 1992

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
 Frame = +2

Query: 227 YFQGNTNVWAKKPKVTA*TYPPKPTSSTRDKPHYQRNKKYSGKRNDTNKRQTKRPSK*AT 406
           Y + N+   AKKPK    T  P  T+    KPH +  K++  +       Q+   SK  T
Sbjct: 80  YNRTNSPSSAKKPKALQHTESPSETN----KPHSKSKKRHLDQEQQLKSAQSPSTSKAHT 135

Query: 407 RKLWVT-EIKLQRRYLTQTGELADDS-SEAT 493
           RK   T   + Q+R  T++  +   S SE+T
Sbjct: 136 RKSGATGGSRSQKRKRTESSCVKSGSGSEST 166


>sp|P06909|CFAH_MOUSE Complement factor H OS=Mus musculus GN=Cfh PE=1
            SV=1
          Length = 1234

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 14/90 (15%)
 Frame = +2

Query: 239  NTNVWAKKPKVTA*TYPPKPTSSTRDKPHYQR----NKKYSGKRNDTNKRQTKRPSK*AT 406
            +T + A KPK+T  T+        RDK  Y+R    N K+  + N T+K     P +   
Sbjct: 757  STGIEAIKPKLTEFTHNSTMDYKCRDKQEYERSICINGKWDPEPNCTSKTSCPPPPQIPN 816

Query: 407  RKLWVTEIK----------LQRRYLTQTGE 466
             ++  T +K           Q  YLTQ  E
Sbjct: 817  TQVIETTVKYLDGEKLSVLCQDNYLTQDSE 846


>sp|Q60591|NFAC2_MOUSE Nuclear factor of activated T-cells,
            cytoplasmic 2 OS=Mus musculus GN=Nfatc2 PE=1 SV=2
          Length = 927

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 21/83 (25%), Positives = 40/83 (48%)
 Frame = +3

Query: 162  FNHNNKR*QGG*HQMSRSLLKATSKETLMFGPKSLK*QPRPTHLNQRVLQGTSRTINGIK 341
            ++  N++ +GG HQ  + ++   +     FGP S +  P P +  QR+  G   T+    
Sbjct: 817  YSPTNQQLRGGGHQEFQHIMYCEN-----FGPSSARPGPPPINQGQRLSPGAYPTV---- 867

Query: 342  NTQASEMTPTKGKQKDLPSEQRE 410
                 +  P++   K+ PS+Q+E
Sbjct: 868  --IQQQTAPSQRAAKNGPSDQKE 888


>sp|Q17QD3|FOX1A_BOVIN Fox-1 homolog A OS=Bos taurus GN=FOX1 PE=2
           SV=1
          Length = 355

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +3

Query: 276 PRPTHLNQRVLQGTSRTINGIKNTQASEMTPTKGKQKDLPSEQRENFG*PK 428
           P  +H  Q     ++ T++G   T  S   PT G+ +  PSE  EN   PK
Sbjct: 68  PAQSHSEQSAADTSAHTVSGTATTDDS--APTDGQPQTQPSENTENKSQPK 116


>sp|Q5HYK7|SH319_HUMAN SH3 domain-containing protein 19 OS=Homo
           sapiens GN=SH3D19 PE=1 SV=2
          Length = 790

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = +2

Query: 197 ASNESITAQGYFQGNTNVWA----KKPKVTA*TYPPKPTSST 310
           + N  ++    F+G TN+      KKP++T  + PPKPT S+
Sbjct: 9   SQNSIVSRIKVFEGQTNIETSGLPKKPEITPRSLPPKPTVSS 50


>sp|Q9LUQ6|RL192_ARATH 60S ribosomal protein L19-2 OS=Arabidopsis
           thaliana GN=RPL19B PE=2 SV=1
          Length = 209

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +2

Query: 293 KPTS-STRDKPHYQRNKKYSGKRNDTNKRQTKRPSK*ATRKLWVTEIKLQRRYLTQTGE 466
           KPT   +R +       K  G+ +   KR+  R ++  T+ LW+  +++ RR+L++  E
Sbjct: 53  KPTKIHSRSRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRE 111


>sp|Q6ZMI0|KLRAQ_HUMAN KLRAQ motif-containing protein 1 OS=Homo
           sapiens GN=KLRAQ1 PE=1 SV=1
          Length = 780

 Score = 30.0 bits (66), Expect = 8.8
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -1

Query: 537 VTIFGCYLHRILVLQVASLESSANSPVCVRYLR*SLISVTQSFR 406
           +T + C+L +IL  Q+ SLE    S +C   LR   + ++Q  +
Sbjct: 346 LTSYICFLRKILPYQLKSLEEECESSLCTSALRARNLELSQDMK 389
tr_hit_id Q01TX7
Definition tr|Q01TX7|Q01TX7_SOLUE TonB-dependent receptor OS=Solibacter usitatus (strain Ellin6076)
Align length 72
Score (bit) 36.6
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916681|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_D01.
         (582 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q01TX7|Q01TX7_SOLUE TonB-dependent receptor OS=Solibacter usi...    37   1.0  
tr|A5DEQ1|A5DEQ1_PICGU Putative uncharacterized protein OS=Pichi...    37   1.0  
tr|A9YCD2|A9YCD2_9ASPA Sesquiterpene synthase OS=Vanda hybrid cu...    35   4.0  
tr|B0WHR6|B0WHR6_CULQU Wd-repeat protein OS=Culex quinquefasciat...    35   4.0  
tr|B1STM7|B1STM7_9BACI Putative uncharacterized protein OS=Geoba...    34   5.2  
tr|A2DTA2|A2DTA2_TRIVA Leucine Rich Repeat family protein OS=Tri...    34   5.2  
tr|Q47A51|Q47A51_DECAR Glycosyl transferase, family 39 OS=Dechlo...    34   6.8  
tr|Q5REN7|Q5REN7_PONAB Putative uncharacterized protein DKFZp459...    34   6.8  
tr|B3M266|B3M266_DROAN GF17099 OS=Drosophila ananassae GN=GF1709...    34   6.8  
tr|Q8TCM0|Q8TCM0_HUMAN Putative uncharacterized protein DKFZp547...    34   6.8  
tr|B7ZLH9|B7ZLH9_HUMAN Putative uncharacterized protein (Fragmen...    34   6.8  
tr|B7Z1U7|B7Z1U7_HUMAN cDNA FLJ59671, highly similar to Ataxin-2...    34   6.8  
tr|Q2GP40|Q2GP40_CHAGB Putative uncharacterized protein OS=Chaet...    34   6.8  
tr|A6TJ59|A6TJ59_KLEP7 SugE, small multidrug resistance family O...    33   8.8  
tr|Q2BFN6|Q2BFN6_9BACI Putative uncharacterized protein OS=Bacil...    33   8.8  

>tr|Q01TX7|Q01TX7_SOLUE TonB-dependent receptor OS=Solibacter
           usitatus (strain Ellin6076) GN=Acid_5952 PE=3 SV=1
          Length = 1163

 Score = 36.6 bits (83), Expect = 1.0
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
 Frame = +2

Query: 203 NESITAQGYFQGNTNVWAKKP--------KVTA*TYPPKPTSSTRDKPHYQRNKKYSGKR 358
           +ES+ A  ++   TNV AK P         V+   + PK  +  RDK  +  N++Y+G+R
Sbjct: 260 HESLNANSFWNNRTNV-AKAPYRYRITGYTVSGPVFIPKVFNKNRDKIFFFWNQEYTGQR 318

Query: 359 NDTNKRQTKRPS 394
            D   R T  P+
Sbjct: 319 KDYGTRLTNMPT 330


>tr|A5DEQ1|A5DEQ1_PICGU Putative uncharacterized protein OS=Pichia
           guilliermondii GN=PGUG_01752 PE=4 SV=2
          Length = 310

 Score = 36.6 bits (83), Expect = 1.0
 Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
 Frame = +2

Query: 23  KPKQKVYQPKFPSEKSIQKKPKNFKQVLVSKEHIQVKDPFWIHET------RVQPQQ*KV 184
           KPK+K  +PK P +K + K+P + K V   K+  + K P     T        QP +  V
Sbjct: 186 KPKKKSKKPKTPKDKDVSKEPNDPKIVEKKKKKKKPKAPQNAPGTAKQGNKAPQPNKDSV 245

Query: 185 TGWIASNESITAQGYFQGNTNVWAKKPKVTA*TYPPKPTSSTRDKP 322
           +G  +  +S   Q   +G  +V  K PK+     P  P    + KP
Sbjct: 246 SGEQSGQQS--NQNSHKGENDV--KAPKINQKKKPKPPKKKPKGKP 287


>tr|A9YCD2|A9YCD2_9ASPA Sesquiterpene synthase OS=Vanda hybrid
           cultivar PE=2 SV=1
          Length = 560

 Score = 34.7 bits (78), Expect = 4.0
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
 Frame = -3

Query: 250 NISVSLEVALSSDRLI*CYPPCHLLLLWLNPCFMYPKWVFD--------LDVLFGYQHLL 95
           N+ +S ++  S DRL+ CY    +L ++  PC+   + +          LD ++     L
Sbjct: 252 NLGLSKKLPFSRDRLVECY--FWVLSVYFEPCYSRARTIMTKCIIQMSYLDDIYDVYGKL 309

Query: 94  EILWLLLDAFF*WKLWLIDFL 32
           E L LL DA   W + LID L
Sbjct: 310 EELRLLTDAIERWDIKLIDNL 330


>tr|B0WHR6|B0WHR6_CULQU Wd-repeat protein OS=Culex quinquefasciatus
           GN=CpipJ_CPIJ006692 PE=4 SV=1
          Length = 983

 Score = 34.7 bits (78), Expect = 4.0
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = +3

Query: 3   HHQQCNGNQSKKSINQSFHQKKASKRSQRISSRCWYPKSTSKSKTHFGYMKHGFNHNNKR 182
           HHQ    N+S  S NQ +    +S+ + R+SS   Y  S+S  +T   Y      HN K+
Sbjct: 816 HHQADANNESSSSYNQVYDHTYSSRSNSRLSSSYDYDCSSSNDETFAEYF-----HNKKK 870


>tr|B1STM7|B1STM7_9BACI Putative uncharacterized protein
           OS=Geobacillus sp. WCH70 GN=GWCH70DRAFT_2269 PE=4 SV=1
          Length = 233

 Score = 34.3 bits (77), Expect = 5.2
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -3

Query: 139 WVFDLDVLFGYQHLLEILWLLLDAFF*WKLWLI 41
           W++ L   FGY  LL+I+W   D  F +KLW++
Sbjct: 60  WMYWLMFCFGYVVLLQIIWKTRDKSFEYKLWIL 92


>tr|A2DTA2|A2DTA2_TRIVA Leucine Rich Repeat family protein
            OS=Trichomonas vaginalis G3 GN=TVAG_359830 PE=4 SV=1
          Length = 1198

 Score = 34.3 bits (77), Expect = 5.2
 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
 Frame = +2

Query: 56   PSEKSIQKKPKNFKQVLVSKEHIQVKDPFWIHETRVQPQQ*KVTGWIASNESITAQGYFQ 235
            PS K  + + +  +   +  + +Q  D ++  E  V PQQ +    I   +S+       
Sbjct: 844  PSSKRTRGRREKERPAPIVTKPVQYNDEYYSDEEEVYPQQRRQQ--IKQPQSV------- 894

Query: 236  GNTNVWAKKPKVTA*TY-----------PPKPTSSTRDKPHYQRNKKYSGKRNDTNKRQT 382
              +N   KKP  T   Y           PP+ T STR +   Q+ KKY     +TN  Q 
Sbjct: 895  -RSNKSQKKPVQTYDEYEYYSDEEEEITPPRSTRSTRSQRPQQQQKKYR-YEVETNTSQK 952

Query: 383  KRPSK 397
            ++P +
Sbjct: 953  RKPKQ 957


>tr|Q47A51|Q47A51_DECAR Glycosyl transferase, family 39
           OS=Dechloromonas aromatica (strain RCB) GN=Daro_3551
           PE=4 SV=1
          Length = 547

 Score = 33.9 bits (76), Expect = 6.8
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 467 IHLFVLGIFVEV*FRLPKVFALLTWKVFLFAFCWCH 360
           + + VLG+  E+ FRLP + A + W +FL+ FC  H
Sbjct: 81  VSVSVLGVS-EIGFRLPSIIASILWLLFLYRFCLHH 115


>tr|Q5REN7|Q5REN7_PONAB Putative uncharacterized protein
           DKFZp459B1321 OS=Pongo abelii GN=DKFZp459B1321 PE=2 SV=1
          Length = 374

 Score = 33.9 bits (76), Expect = 6.8
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +3

Query: 276 PRPTHLNQRVLQGTSRTINGIKNTQASEMTPTKGKQKDLPSEQRENFG*PK 428
           P  TH  Q     +++T++G   TQ  +  PT G+ +  PSE  EN   PK
Sbjct: 68  PAQTHSEQSPADTSAQTVSGTA-TQTDDAAPTDGQPQTQPSENTENKSQPK 117


>tr|B3M266|B3M266_DROAN GF17099 OS=Drosophila ananassae GN=GF17099
           PE=4 SV=1
          Length = 1177

 Score = 33.9 bits (76), Expect = 6.8
 Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 19/132 (14%)
 Frame = +2

Query: 89  NFKQVLVSKEHIQVKDPFWIHETRVQPQQ*KVTGWIASNESITAQGYFQGNTNVWAK-KP 265
           +F  V+ SKE  Q+ +   +H+ ++QPQ    T     + +     Y QG  N +A   P
Sbjct: 484 SFTHVVDSKEVEQMIEK--MHQNKLQPQPLMST----EHSNPYVPPYAQGRPNNYAHFNP 537

Query: 266 KVTA*TYPPKPTS------------------STRDKPHYQRNKKYSGKRNDTNKRQTKRP 391
           +  A   PP+  +                   +R   H  RN K +  R+ +N  Q KRP
Sbjct: 538 EAPAGNNPPQSQTVDDETHKRMVDRFLRGNRPSRSDTHGSRNPKRNRSRSPSND-QRKRP 596

Query: 392 SK*ATRKLWVTE 427
           +   T++LW  E
Sbjct: 597 AATPTKRLWNVE 608


>tr|Q8TCM0|Q8TCM0_HUMAN Putative uncharacterized protein
           DKFZp547L059 (Fragment) OS=Homo sapiens GN=DKFZp547L059
           PE=2 SV=2
          Length = 262

 Score = 33.9 bits (76), Expect = 6.8
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +3

Query: 276 PRPTHLNQRVLQGTSRTINGIKNTQASEMTPTKGKQKDLPSEQRENFG*PK 428
           P  TH  Q     +++T++G   TQ  +  PT G+ +  PSE  EN   PK
Sbjct: 68  PAQTHSEQSPADTSAQTVSGTA-TQTDDAAPTDGQPQTQPSENTENKSQPK 117