BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916685|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_D05.
         (554 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q54XT8|U399_DICDI UPF0399 protein OS=Dictyostelium discoideum...    30   6.0  
sp|Q8R3H9|TTC4_MOUSE Tetratricopeptide repeat protein 4 OS=Mus m...    30   6.0  
sp|O95801|TTC4_HUMAN Tetratricopeptide repeat protein 4 OS=Homo ...    30   6.0  
sp|Q3YS14|SYS_EHRCJ Seryl-tRNA synthetase OS=Ehrlichia canis (st...    30   7.9  
sp|P07547|ARO1_EMENI Pentafunctional AROM polypeptide OS=Emerice...    30   7.9  

>sp|Q54XT8|U399_DICDI UPF0399 protein OS=Dictyostelium discoideum
           GN=DDB_G0278751 PE=3 SV=1
          Length = 298

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 20/58 (34%), Positives = 31/58 (53%)
 Frame = +1

Query: 268 SDCEFENMGSNPVTRQRHVVPSKTKVNGDFESRVNSCNSMI*STSV*GRFGENLFRRR 441
           SD   E     PV+R R VV +KTK+N   + R +S +         G++ E+L+R+R
Sbjct: 122 SDAPVEMTAMKPVSRFRQVVVNKTKMNVR-DPRFDSLSG--------GKYNEDLYRKR 170


>sp|Q8R3H9|TTC4_MOUSE Tetratricopeptide repeat protein 4 OS=Mus
           musculus GN=Ttc4 PE=2 SV=1
          Length = 386

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -2

Query: 490 AVCNLTYKVGQEQLNWCDDGTDSLRIDPKQ 401
           A+C+L  K   E +NWCD+G   L+ID K+
Sbjct: 158 ALCHLELKHFAEAVNWCDEG---LQIDAKE 184


>sp|O95801|TTC4_HUMAN Tetratricopeptide repeat protein 4 OS=Homo
           sapiens GN=TTC4 PE=1 SV=3
          Length = 387

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -2

Query: 490 AVCNLTYKVGQEQLNWCDDGTDSLRIDPKQ 401
           A+C+L  K   E +NWCD+G   L+ID K+
Sbjct: 158 ALCHLELKHFAEAVNWCDEG---LQIDAKE 184


>sp|Q3YS14|SYS_EHRCJ Seryl-tRNA synthetase OS=Ehrlichia canis
           (strain Jake) GN=serS PE=3 SV=1
          Length = 423

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 9/38 (23%), Positives = 22/38 (57%)
 Frame = -3

Query: 198 NQFKHVCTCYQIRTDNLEQIQKKYVAFTNSTEVNRYAH 85
           N+++ + +C   +     ++  KY   TN+ +V+++AH
Sbjct: 342 NRYREISSCSNCKDFQARRMNTKYTTITNNVKVSKFAH 379


>sp|P07547|ARO1_EMENI Pentafunctional AROM polypeptide OS=Emericella
           nidulans GN=aroMA PE=1 SV=2
          Length = 1586

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 369 EFVQLDDMKHVCLGSIRRESVPSSHQFNCSWPTL*VR-LQTAGHMVYLV 512
           EF  L++     L ++RRE  P  H+F  +   L  R L +A H  Y+V
Sbjct: 206 EFTALEENAETILKAVRREVTPGEHRFEGTEEILKARILASARHKAYVV 254

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916685|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_D05.
         (554 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q36334|Q36334_CHOCR Putative orf60 protein OS=Chondrus crispu...    39   0.14 
tr|Q2M093|Q2M093_DROPS GA20322 OS=Drosophila pseudoobscura pseud...    34   4.6  
tr|Q6YTT4|Q6YTT4_ORYSJ Os08g0484400 protein OS=Oryza sativa subs...    33   7.8  

>tr|Q36334|Q36334_CHOCR Putative orf60 protein OS=Chondrus crispus
           GN=putative orf60 PE=4 SV=1
          Length = 60

 Score = 39.3 bits (90), Expect = 0.14
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = +1

Query: 4   QSSLGEKGKHDRLKICSVSRVIGSSPIVS 90
           + SLGEKGKHD  KI S+ +V GSSP+ S
Sbjct: 23  KGSLGEKGKHDGFKIRSLLKVTGSSPVAS 51


>tr|Q2M093|Q2M093_DROPS GA20322 OS=Drosophila pseudoobscura
           pseudoobscura GN=GA20322 PE=4 SV=2
          Length = 584

 Score = 34.3 bits (77), Expect = 4.6
 Identities = 21/68 (30%), Positives = 32/68 (47%)
 Frame = -3

Query: 330 WDDVSLASNGIRTHVFKFTI*HSDPLSYTCPRG*LPAPSALEA*NQFKHVCTCYQIRTDN 151
           +DD  + SN  R ++  F + HS  +S TC    L A        +FKHV  C+    +N
Sbjct: 349 FDDFDVKSNEWRFYILFFFVAHSIAMSSTCYNPFLYAWLNENFRKEFKHVLPCFNPSNNN 408

Query: 150 LEQIQKKY 127
           +  I + Y
Sbjct: 409 IINITRGY 416


>tr|Q6YTT4|Q6YTT4_ORYSJ Os08g0484400 protein OS=Oryza sativa subsp.
           japonica GN=P0419H09.14 PE=2 SV=1
          Length = 812

 Score = 33.5 bits (75), Expect = 7.8
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = +1

Query: 226 ELAPRAGITQW-VRVSDCEFENMGSNPVTRQRHVVPSKTKVNGDFESRVNSCNSMI*STS 402
           EL  R G++ W V+     F+N    P  R+  ++PS    N   +   + C+ +  +T 
Sbjct: 394 ELVHRPGLSTWKVQDKGSWFQNHDDVPCDRKNVILPSMFPSNNSIQEGQSVCDDIEVNTG 453

Query: 403 V*GRFGENLFRRRTNSI 453
             G F  N    +TN +
Sbjct: 454 SNGSFSRNFSIEKTNKV 470