BP916688 [AcEST]

BP916688
Clone id	YMU001_000090_D08
Library	YMU01
Length	547
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000090_D08.
Accession	BP916688
Tissue type	prothallium
Developmental stage	-
Contig ID	CL3401Contig1
Sequence	GAGTACCTGCGAGAGAGAGAGCTAAGATGCGGACCTTGCTGCCTTCGCATCCTCTGATCT ATACTATGCATGAATTTTTACCTTGGGTGCTCTCGGCATAGCCTGAGATCAAGGCATTTC ACATGACTATATTGCATGTAGTAAGCTTTTCATGCGGAGATAATGAAACAACCTACCTTT GCTGACCTCAACTGACAATCTCCAAGTCACACCCACCACTAGCCTTCCGGTCTTAGCGCC TCGACCTCTATCCTCACCTTCCAGGGCTCCACACTTGATGTACGTAGAGACGTTAAAGAG GAAAGCATCATGCTGCAAATCCATCTGCTCTAATCTCGCACCCTGGAACCACTTGCAGAG TACACCATCGATAGCAACCATCACCCCTCTTTGCACCACACTATCAGTTGAACATCAATT GACGGCAGCAATTGCGAGTGGAGACGTATTACCTCGACAAACATAGGTGTGGACAACGGC GACGCTATTTACTTGGTGAGCCAAAGGTCATTTTCTTGATATTTGAGCCCATGATCCAAG CCATGCC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q9H221
Definition	sp\|Q9H221\|ABCG8_HUMAN ATP-binding cassette sub-family G member 8 OS=Homo sapiens
Align length	45
Score (bit)	31.2
E-value	3.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP916688\|Adiantum capillus-veneris mRNA, clone: YMU001_000090_D08. (547 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q9H221\|ABCG8_HUMAN ATP-binding cassette sub-family G member 8... 31 3.4 sp\|Q9DBM0\|ABCG8_MOUSE ATP-binding cassette sub-family G member 8... 30 9.9 >sp\|Q9H221\|ABCG8_HUMAN ATP-binding cassette sub-family G member 8 OS=Homo sapiens GN=ABCG8 PE=1 SV=1 Length = 673 Score = 31.2 bits (69), Expect = 3.4 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = -3 Query: 542 GLDHGLKYQENDLWLTKIASPLSTPMFVEVIRLHSQLLPSIDVQ 408 G HG K + +W+ +SP V +R H+QLLP++ V+ Sbjct: 120 GRGHGGKIKSGQIWINGQPSSPQLVRKCVAHVRQHNQLLPNLTVR 164 >sp\|Q9DBM0\|ABCG8_MOUSE ATP-binding cassette sub-family G member 8 OS=Mus musculus GN=Abcg8 PE=2 SV=1 Length = 673 Score = 29.6 bits (65), Expect = 9.9 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = -3 Query: 542 GLDHGLKYQENDLWLTKIASPLSTPMFVEVIRLHSQLLPSIDVQ 408 G HG K + +W+ ++P V +R H QLLP++ V+ Sbjct: 121 GRGHGGKMKSGQIWINGQPSTPQLVRKCVAHVRQHDQLLPNLTVR 165
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A7CUX2
Definition	tr\|A7CUX2\|A7CUX2_9BACT Lipolytic protein G-D-S-L family OS=Opitutaceae bacterium TAV2
Align length	71
Score (bit)	33.5
E-value	7.5
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP916688\|Adiantum capillus-veneris mRNA, clone: YMU001_000090_D08. (547 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A7CUX2\|A7CUX2_9BACT Lipolytic protein G-D-S-L family OS=Opitu... 33 7.5 >tr\|A7CUX2\|A7CUX2_9BACT Lipolytic protein G-D-S-L family OS=Opitutaceae bacterium TAV2 GN=ObacDRAFT_1507 PE=4 SV=1 Length = 381 Score = 33.5 bits (75), Expect = 7.5 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Frame = +2 Query: 281 YVETLKRKASCCKSICSNLAPWNHLQSTPSIATIT--PLCTTLSVEHQLTAAIASGDVLP 454 Y E LK+ A C PWNHL + ++T + H+L A + + D+LP Sbjct: 275 YHEQLKKLADARIVFCDVFTPWNHLVARKGFVSVTGNGVNHPNDYGHRLYADVLTRDLLP 334 Query: 455 RQT*VWTTATL 487 T W L Sbjct: 335 DTTQEWPPPAL 345