BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916692|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_D12.
         (548 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P11976|PSTA_DICDI Prestalk protein OS=Dictyostelium discoideu...    30   5.9  
sp|Q5SSE9|ABCAD_MOUSE ATP-binding cassette sub-family A member 1...    30   5.9  
sp|Q8CX16|OXAA1_STRA5 Membrane protein oxaA 1 OS=Streptococcus a...    30   7.7  
sp|Q8E6W4|OXAA1_STRA3 Membrane protein oxaA 1 OS=Streptococcus a...    30   7.7  

>sp|P11976|PSTA_DICDI Prestalk protein OS=Dictyostelium discoideum
            GN=ecmB PE=2 SV=2
          Length = 1053

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 207  PSDLEETNSENCRFCNAKQGNKCRH 133
            P D  + N   C +C+ KQG KC H
Sbjct: 1013 PVDCNDNNVLTCDYCSIKQGGKCIH 1037


>sp|Q5SSE9|ABCAD_MOUSE ATP-binding cassette sub-family A member 13
            OS=Mus musculus GN=Abca13 PE=2 SV=1
          Length = 5034

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 401  PVCGVRYHIINQVGKSLDVHWLGSVPGLGYLNATLWCAMLKAKHLSRNL 255
            P+ GV    I ++ KSL+  W+  +P + +L+       +K K L RN+
Sbjct: 2997 PLVGVVQQHIRRLTKSLEEVWMSKIPAMTFLSNFTVTEDVKIKDLMRNI 3045


>sp|Q8CX16|OXAA1_STRA5 Membrane protein oxaA 1 OS=Streptococcus
           agalactiae serotype V GN=oxaA1 PE=3 SV=1
          Length = 271

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
 Frame = -1

Query: 191 KRIVRTAASVMQSKATSVGIGETWLPGHSQDIAEQKFYAVYDNKTWVACN--------LY 36
           K+ ++T + ++ + +  V  G   +  HS  + EQ  YA   +  W++ N        L+
Sbjct: 2   KKKLKTFSLILLTGSLLVACGRGEVSSHSATLWEQIVYAFAKSIQWLSFNHSIGLGIILF 61

Query: 35  VVIIRRVVMP 6
            +IIR ++MP
Sbjct: 62  TLIIRAIMMP 71


>sp|Q8E6W4|OXAA1_STRA3 Membrane protein oxaA 1 OS=Streptococcus
           agalactiae serotype III GN=oxaA1 PE=3 SV=1
          Length = 271

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
 Frame = -1

Query: 191 KRIVRTAASVMQSKATSVGIGETWLPGHSQDIAEQKFYAVYDNKTWVACN--------LY 36
           K+ ++T + ++ + +  V  G   +  HS  + EQ  YA   +  W++ N        L+
Sbjct: 2   KKKLKTFSLILLTGSLLVACGRGEVSSHSATLWEQIVYAFAKSIQWLSFNHSIGLGIILF 61

Query: 35  VVIIRRVVMP 6
            +IIR ++MP
Sbjct: 62  TLIIRAIMMP 71

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916692|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_D12.
         (548 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RWE8|A9RWE8_PHYPA Predicted protein OS=Physcomitrella paten...    45   0.003
tr|B4VNB7|B4VNB7_9CYAN Tetratricopeptide repeat domain protein O...    37   0.52 
tr|A2Q3P9|A2Q3P9_MEDTR SAM (And some other nucleotide) binding m...    37   0.68 
tr|Q18D35|Q18D35_CLOD6 Putative biotin synthase OS=Clostridium d...    34   5.8  
tr|A7PY07|A7PY07_VITVI Chromosome chr15 scaffold_37, whole genom...    34   5.8  
tr|B3L4Q3|B3L4Q3_PLAKH SICA antigen (Fragment) OS=Plasmodium kno...    33   7.5  
tr|A5FHL2|A5FHL2_FLAJ1 Major facilitator superfamily MFS_1 OS=Fl...    33   9.8  

>tr|A9RWE8|A9RWE8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_161405 PE=4 SV=1
          Length = 318

 Score = 44.7 bits (104), Expect = 0.003
 Identities = 22/29 (75%), Positives = 26/29 (89%)
 Frame = -3

Query: 543 ALKSIHLLETARPDELTLDQFVALYSVLD 457
           AL SI LLETARP+ELTLDQFVAL++ L+
Sbjct: 285 ALTSIGLLETARPEELTLDQFVALHNTLN 313


>tr|B4VNB7|B4VNB7_9CYAN Tetratricopeptide repeat domain protein
           OS=Microcoleus chthonoplastes PCC 7420 GN=MC7420_4661
           PE=4 SV=1
          Length = 910

 Score = 37.4 bits (85), Expect = 0.52
 Identities = 18/36 (50%), Positives = 23/36 (63%)
 Frame = +1

Query: 217 NVTGAHNYTSSYKRFLLRCFALSIAHQRVAFKYPSP 324
           N+TGA++Y ++Y RFLL    LS    R AFKY  P
Sbjct: 326 NLTGANDYPTAYNRFLLANAYLSQGQYREAFKYAQP 361


>tr|A2Q3P9|A2Q3P9_MEDTR SAM (And some other nucleotide) binding
           motif OS=Medicago truncatula GN=MtrDRAFT_AC155886g27v2
           PE=4 SV=1
          Length = 349

 Score = 37.0 bits (84), Expect = 0.68
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = -3

Query: 546 KALKSIHLLETARPDELTLDQFVALYS 466
           +AL+SI LL T+RP+ELTLD FV L++
Sbjct: 318 EALESIGLLSTSRPEELTLDDFVKLHN 344


>tr|Q18D35|Q18D35_CLOD6 Putative biotin synthase OS=Clostridium
           difficile (strain 630) GN=CD0297 PE=4 SV=1
          Length = 325

 Score = 33.9 bits (76), Expect = 5.8
 Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 9/170 (5%)
 Frame = +3

Query: 12  NNPSDYDYI*ITSNPCFIIIHSIEFLLCNILGMAWQPCFTNAYTCCLALHYRSGSSHYSF 191
           NN +D+D +  ++N         +  LC I+      C  +   C  + +Y++G   YS 
Sbjct: 32  NNKNDFDILLKSANEIREYFMGRKADLCTIMNAKSGKCSEDCKFCAQSSYYKTGVEEYSL 91

Query: 192 LLNH*VLN--ERHRSP*LHVFI*KVSAQMLRFKHSTPESCI*IPKSRHTAQPMNIKALTN 365
           L  + +LN  +   S  +H F    S + +  K     + + I +       + + A   
Sbjct: 92  LDYNEILNRAKEMESKGVHRFSLVTSGKGMSGKEF--NNILNIYEGLRENTNLKLCASLG 149

Query: 366 LIDY----MITD---STHRHEI*VLNLQPCHRIFHSSYLTHYTKLRIDPV 494
           +IDY    M+     +T+ H     N++ C   FH+   TH  K RI  +
Sbjct: 150 IIDYEQAKMLKSAGVTTYHH-----NVETCRDNFHNICTTHTYKDRIKTI 194


>tr|A7PY07|A7PY07_VITVI Chromosome chr15 scaffold_37, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026254001
           PE=4 SV=1
          Length = 335

 Score = 33.9 bits (76), Expect = 5.8
 Identities = 14/29 (48%), Positives = 24/29 (82%)
 Frame = -3

Query: 546 KALKSIHLLETARPDELTLDQFVALYSVL 460
           +AL+++ L  T+RP+ELTLD FV L++++
Sbjct: 304 EALRNVGLPATSRPEELTLDDFVRLHNLI 332


>tr|B3L4Q3|B3L4Q3_PLAKH SICA antigen (Fragment) OS=Plasmodium
           knowlesi (strain H) GN=PKH_090740 PE=4 SV=1
          Length = 290

 Score = 33.5 bits (75), Expect = 7.5
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 82  NFCSAISWEWPGNHVSPM-PTLVALLCITEAAVLTIRFF 195
           NFCS  + EWPG   SP  P  + LLC    AVL I++F
Sbjct: 28  NFCSKDTVEWPGGPKSPFWPPYMELLC---NAVLEIKYF 63


>tr|A5FHL2|A5FHL2_FLAJ1 Major facilitator superfamily MFS_1
           OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM
           2064 / UW101) GN=Fjoh_2285 PE=4 SV=1
          Length = 386

 Score = 33.1 bits (74), Expect = 9.8
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +2

Query: 110 GLATMFHQCLHLLPCFALQKRQFSLFVSSKSLGSQRTSPEPIITRLH 250
           GLA    Q + +L  F   +  F+L ++++SL  Q+  P+ IITR H
Sbjct: 98  GLAAFVWQLVIILLFFGASRNIFNLSINAQSLEVQKLYPKSIITRFH 144