BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916696|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_E04.
         (572 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6FP10|MED16_CANGA Mediator of RNA polymerase II transcriptio...    30   8.5  

>sp|Q6FP10|MED16_CANGA Mediator of RNA polymerase II transcription
           subunit 16 OS=Candida glabrata GN=SIN4 PE=3 SV=1
          Length = 973

 Score = 30.0 bits (66), Expect = 8.5
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 9/64 (14%)
 Frame = -3

Query: 543 ESYCIHVTVHS---PSSFASDIQVKDTNSTKLYCHHGATTIP------QAHHFYDISRIH 391
           + Y IH  +H     +   + I     +ST     HG T++P      Q   FYDIS IH
Sbjct: 48  QRYVIHPQLHEVPLKTETGNGINGASGSSTAQSNIHGTTSVPGSAGKHQHQFFYDISSIH 107

Query: 390 YIFW 379
           +  W
Sbjct: 108 WNNW 111

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916696|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_E04.
         (572 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4B330|B4B330_9CHRO Diguanylate cyclase/phosphodiesterase wit...    39   0.20 
tr|A1CKP8|A1CKP8_ASPCL Putative uncharacterized protein OS=Asper...    35   2.3  

>tr|B4B330|B4B330_9CHRO Diguanylate cyclase/phosphodiesterase with
           PAS/PAC sensor(S) OS=Cyanothece sp. PCC 7822
           GN=Cyan7822DRAFT_3231 PE=4 SV=1
          Length = 1188

 Score = 38.9 bits (89), Expect = 0.20
 Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
 Frame = +3

Query: 21  QESVYQISRDGMLPSEKTDGRLQNRSFHKCNLHQNGLDNLHYSLAAAKVSAKISKRDSTR 200
           +E +     +  L   K   R     F K NL QNGL  L  S  AAK    I K  S  
Sbjct: 61  EEELQAAREENKLLETKLKIRQHLLEFQKDNLKQNGLKKLRESSQAAKTCQVILKNYSQD 120

Query: 201 IESTC------PTDYLEPPRKQLR--I*YTLSVNFFCIYGY 299
            +  C       TD  EP + +++    +TLS++  CI G+
Sbjct: 121 EQGNCTNCIGVKTDVTEPKQAEIQRERFFTLSLDLLCIAGF 161


>tr|A1CKP8|A1CKP8_ASPCL Putative uncharacterized protein
           OS=Aspergillus clavatus GN=ACLA_039370 PE=4 SV=1
          Length = 1025

 Score = 35.4 bits (80), Expect = 2.3
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 9/67 (13%)
 Frame = +3

Query: 57  LPSEKTDGRLQNRSFHK---------CNLHQNGLDNLHYSLAAAKVSAKISKRDSTRIES 209
           +PS+ TD +   RS  K           LHQN    + +S   AK S  I+K  ST++  
Sbjct: 1   MPSDPTDQQEHPRSCDKTGDSELSTSAQLHQNETSEVQFSETKAKPSQHITKLKSTQVVV 60

Query: 210 TCPTDYL 230
             PT YL
Sbjct: 61  PTPTQYL 67