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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916700
Clone id YMU001_000090_E09
Library
Length 545
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000090_E09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCAGGTTGTAGTTGATCCTTCATCTTTAATGCCTCGTAGATAACCCTTGTTATGATCTCA
CCTCCTCCAATGTACAGTGGTGAGGTATTCCTGAGCTTGATAAGAGAAACCAATACATGT
GCAGCATGGTTTATCACTACCAACCCTGGACTCTGCAATGCCCATGTTAAGGTGGTGGCC
ATAGATGCCATGGGGTTGGTATACCTTGGTGGTCTCTTGCTTATGCACAAAACACACTGA
TTATATATTCTGCAAAGAATTTTTGCTGTTTGGTTCTGCATATCTTCAAATACTTGTGTC
GTTTGCTTGTTGCTGAATACCACCAGCTTATGGTGTCTCTCTCTGACACTGGATCCCTCC
CTAGACAAATGGCAGGCGGCATGGACGATGTCGGTTGTGATTTTAATTTGTACTTTATTG
CCATATCGTCCTGTGACCATGCATGTTCCATCATCTTGGATTGATTCTACTAACTCATGG
ACTCTCTGAATGTCTATGCTGATAGGGGGAAGAGTCAAGAACTTCAACAAACCCGCTGTC
TTCAT
■■Homology search results ■■ -
sp_hit_id Q8YTZ6
Definition sp|Q8YTZ6|PHK2_ANASP Probable phosphoketolase 2 OS=Anabaena sp. (strain PCC 7120)
Align length 66
Score (bit) 34.7
E-value 0.31
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916700|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_E09.
         (545 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8YTZ6|PHK2_ANASP Probable phosphoketolase 2 OS=Anabaena sp. ...    35   0.31 
sp|Q7NLX2|PHK_GLOVI Probable phosphoketolase OS=Gloeobacter viol...    34   0.40 
sp|Q988V7|PHK_RHILO Probable phosphoketolase OS=Rhizobium loti G...    33   0.89 
sp|Q8KCA0|PHK_CHLTE Probable phosphoketolase OS=Chlorobium tepid...    32   2.6  
sp|Q92T74|PHK1_RHIME Probable phosphoketolase 1 OS=Rhizobium mel...    32   2.6  
sp|Q6MFC0|PHK_PARUW Probable phosphoketolase OS=Protochlamydia a...    31   3.4  
sp|P11156|RIR2_BPT4 Ribonucleoside-diphosphate reductase subunit...    31   4.4  
sp|Q01172|PLYA_ASPNG Pectin lyase A OS=Aspergillus niger GN=pelA...    31   4.4  
sp|Q6N976|PHK_RHOPA Probable phosphoketolase OS=Rhodopseudomonas...    31   4.4  
sp|Q00374|PLYA_COLGL Pectin lyase OS=Colletotrichum gloeosporioi...    30   5.8  
sp|P31833|COX1_BRAJA Cytochrome c oxidase subunit 1 OS=Bradyrhiz...    30   7.6  
sp|Q82T07|PHK_NITEU Probable phosphoketolase OS=Nitrosomonas eur...    30   9.9  
sp|Q9HC84|MUC5B_HUMAN Mucin-5B OS=Homo sapiens GN=MUC5B PE=1 SV=2      30   9.9  
sp|A8GI11|MLTF_SERP5 Membrane-bound lytic murein transglycosylas...    30   9.9  
sp|Q6AYH0|IIP45_RAT Invasion-inhibitory protein 45 OS=Rattus nor...    30   9.9  

>sp|Q8YTZ6|PHK2_ANASP Probable phosphoketolase 2 OS=Anabaena sp.
           (strain PCC 7120) GN=all2567 PE=3 SV=1
          Length = 793

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = -3

Query: 198 QPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLT-TVHWRR*DHNKGYLRGIKD 22
           QP   + H LN    E+   +DKP    I F++    +L   + +R+ +HN  ++RG K+
Sbjct: 667 QPKTEHPHGLNPKDFETIFTTDKP----IIFAFHGYPWLIHRLTYRQPNHNNLHVRGYKE 722

Query: 21  EGSTTT 4
           EG+TTT
Sbjct: 723 EGTTTT 728


>sp|Q7NLX2|PHK_GLOVI Probable phosphoketolase OS=Gloeobacter
           violaceus GN=glr0997 PE=3 SV=1
          Length = 793

 Score = 34.3 bits (77), Expect = 0.40
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = -3

Query: 198 QPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLT-TVHWRR*DHNKGYLRGIKD 22
           QP   + H L+    +S    DKP    + F++    +L   + +RR +HN  ++RG K+
Sbjct: 667 QPESEHPHGLSDKDFDSIFTPDKP----VVFAFHGYPWLIHRLTYRRNNHNNIHVRGYKE 722

Query: 21  EGSTTT 4
           EG+TTT
Sbjct: 723 EGTTTT 728


>sp|Q988V7|PHK_RHILO Probable phosphoketolase OS=Rhizobium loti
           GN=mlr6575 PE=3 SV=1
          Length = 807

 Score = 33.1 bits (74), Expect = 0.89
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
 Frame = -3

Query: 207 KVYQPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLTTVH---WRR*DHNKGYL 37
           K Y PHG+          ++    DKP    + F+Y    Y  T+H   +RR +H+  ++
Sbjct: 673 KEYHPHGLSDREF-----DALFTPDKP----VIFAYHG--YPWTIHRLTYRRTNHDNIHV 721

Query: 36  RGIKDEGSTTT 4
           RG  +EG+TTT
Sbjct: 722 RGYNEEGTTTT 732


>sp|Q8KCA0|PHK_CHLTE Probable phosphoketolase OS=Chlorobium tepidum
           GN=CT1524 PE=3 SV=2
          Length = 791

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = -3

Query: 198 QPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLT-TVHWRR*DHNKGYLRGIKD 22
           QP   + H L     +    +DKP    I F+Y    +L   + +RR +H+  ++RG K+
Sbjct: 665 QPKEEHPHGLADRDFDDMFTTDKP----IIFAYHGYPWLIHRLTYRRTNHHNLHVRGYKE 720

Query: 21  EGSTTT 4
           EG+TTT
Sbjct: 721 EGTTTT 726


>sp|Q92T74|PHK1_RHIME Probable phosphoketolase 1 OS=Rhizobium
           meliloti GN=R00106 PE=3 SV=1
          Length = 789

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = -3

Query: 198 QPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLT-TVHWRR*DHNKGYLRGIKD 22
           QP G + H L     ++    DKP    I F++    +L   + +RR +H   ++RG K+
Sbjct: 647 QPSGEHPHGLPDRDFDALFTKDKP----IIFAFHGYPWLIHRLTYRRTNHANLHVRGYKE 702

Query: 21  EGSTTT 4
           EG+TTT
Sbjct: 703 EGTTTT 708


>sp|Q6MFC0|PHK_PARUW Probable phosphoketolase OS=Protochlamydia
           amoebophila (strain UWE25) GN=pc0005 PE=3 SV=1
          Length = 798

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = -3

Query: 198 QPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLT-TVHWRR*DHNKGYLRGIKD 22
           QP   + H L+    +    ++KP    I F+Y    +L   + +RR +H+  ++RG K+
Sbjct: 669 QPKEEHPHGLSNTDFDEMFTTNKP----IIFAYHGYPWLIHRLTYRRSNHSNIHVRGYKE 724

Query: 21  EGSTTT 4
           EG+TTT
Sbjct: 725 EGTTTT 730


>sp|P11156|RIR2_BPT4 Ribonucleoside-diphosphate reductase subunit
           beta OS=Enterobacteria phage T4 GN=NRDB PE=3 SV=2
          Length = 388

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +1

Query: 337 LSLTLDPSLDKWQAAWTMSVVI 402
           +SL  DPSLD W A WT S  I
Sbjct: 96  MSLISDPSLDTWVATWTFSETI 117


>sp|Q01172|PLYA_ASPNG Pectin lyase A OS=Aspergillus niger GN=pelA
           PE=1 SV=1
          Length = 379

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 18/80 (22%), Positives = 40/80 (50%)
 Frame = -1

Query: 287 EDMQNQTAKILCRIYNQCVLCISKRPPRYTNPMASMATTLTWALQSPGLVVINHAAHVLV 108
           E+ +     +    YN  VL I+      T+  + +    + A++  GL +++ A ++++
Sbjct: 103 ENYEPDAPSVSVEYYNAGVLGIT-----VTSNKSLIGEGSSGAIKGKGLRIVSGAENIII 157

Query: 107 SLIKLRNTSPLYIGGGEIIT 48
             I + + +P Y+ GG+ IT
Sbjct: 158 QNIAVTDINPKYVWGGDAIT 177


>sp|Q6N976|PHK_RHOPA Probable phosphoketolase OS=Rhodopseudomonas
           palustris GN=RPA1673 PE=3 SV=1
          Length = 783

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = -3

Query: 204 VYQPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLT-TVHWRR*DHNKGYLRGI 28
           V QP   + H L+    +    +DKP    + F++    +L   + +RR +H   ++RG 
Sbjct: 655 VLQPSSEHPHGLDDRRFDELFTTDKP----VIFAFHGYPWLIHRLTYRRRNHVNIHVRGY 710

Query: 27  KDEGSTTT 4
           K+EG+TTT
Sbjct: 711 KEEGTTTT 718


>sp|Q00374|PLYA_COLGL Pectin lyase OS=Colletotrichum gloeosporioides
           GN=PNLA PE=3 SV=1
          Length = 380

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -1

Query: 158 LQSPGLVVINHAAHVLVSLIKLRNTSPLYIGGGEIIT 48
           ++  GL + N A +V++  I + N +P Y+ GG+ I+
Sbjct: 142 IKGKGLRITNSAKNVIIQNIHITNLNPKYVWGGDAIS 178
tr_hit_id Q3MFW6
Definition tr|Q3MFW6|Q3MFW6_ANAVT D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
Align length 66
Score (bit) 34.7
E-value 3.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916700|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_E09.
         (545 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q3MFW6|Q3MFW6_ANAVT D-xylulose 5-phosphate/D-fructose 6-phosp...    35   3.4  
tr|Q84BW4|Q84BW4_BARQU VirB10 OS=Bartonella quintana GN=virB10 P...    35   3.4  
tr|B4S9G8|B4S9G8_PROA2 Phosphoketolase OS=Prosthecochloris aestu...    34   5.8  
tr|Q4P975|Q4P975_USTMA Predicted protein OS=Ustilago maydis GN=U...    33   7.6  
tr|A6SIR2|A6SIR2_BOTFB Putative uncharacterized protein OS=Botry...    33   7.6  
tr|A3ZX45|A3ZX45_9PLAN Putative phosphoketolase OS=Blastopirellu...    33   9.9  
tr|A9UZV7|A9UZV7_MONBE Predicted protein OS=Monosiga brevicollis...    33   9.9  
tr|Q5KK67|Q5KK67_CRYNE Galactinol synthase, putative (Putative u...    33   9.9  
tr|Q0URG1|Q0URG1_PHANO Putative uncharacterized protein OS=Phaeo...    33   9.9  

>tr|Q3MFW6|Q3MFW6_ANAVT D-xylulose 5-phosphate/D-fructose
           6-phosphate phosphoketolase OS=Anabaena variabilis
           (strain ATCC 29413 / PCC 7937) GN=Ava_0496 PE=4 SV=1
          Length = 793

 Score = 34.7 bits (78), Expect = 3.4
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
 Frame = -3

Query: 198 QPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLT-TVHWRR*DHNKGYLRGIKD 22
           QP   + H LN    E+   +DKP    I F++    +L   + +R+ +HN  ++RG K+
Sbjct: 667 QPKTEHPHGLNPKDFETIFTTDKP----IIFAFHGYPWLIHRLTYRQPNHNNLHVRGYKE 722

Query: 21  EGSTTT 4
           EG+TTT
Sbjct: 723 EGTTTT 728


>tr|Q84BW4|Q84BW4_BARQU VirB10 OS=Bartonella quintana GN=virB10 PE=4
           SV=1
          Length = 446

 Score = 34.7 bits (78), Expect = 3.4
 Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
 Frame = -1

Query: 512 LPPISIDIQRVH---ELVESIQDDGTCMV--TGRYGNKVQIKITTDIVHAACHLSREGSS 348
           LP   I++ + +    L+E+ Q + +C+   + +    +Q KITT       H +    +
Sbjct: 100 LPTPKINLLKTNADDSLLEAAQTECSCLAYASPQKSQAMQKKITT------LHRTNSKEN 153

Query: 347 VRERHHKLVVFSNKQTTQVF 288
           + ++H+ L++FSN+QT +VF
Sbjct: 154 LMKQHNALIIFSNRQTLKVF 173


>tr|B4S9G8|B4S9G8_PROA2 Phosphoketolase OS=Prosthecochloris
           aestuarii (strain DSM 271 / SK 413) GN=Paes_1620 PE=4
           SV=1
          Length = 798

 Score = 33.9 bits (76), Expect = 5.8
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
 Frame = -3

Query: 273 PNSKNSLQNI*SVCFVHKQETTKVYQPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQA 94
           P+ K  + N+  +  +  QE      PHG+   H      +    +DKP    + F+Y  
Sbjct: 656 PDLKIRVVNVIDLMTLQPQEE----HPHGLPDRHF-----DDIFTTDKP----VIFAYHG 702

Query: 93  QEYLT-TVHWRR*DHNKGYLRGIKDEGSTTT 4
             +L   + +RR +H   ++RG K+EG+TTT
Sbjct: 703 YPWLIHRLTYRRTNHRNLHVRGYKEEGTTTT 733


>tr|Q4P975|Q4P975_USTMA Predicted protein OS=Ustilago maydis
           GN=UM03338.1 PE=4 SV=1
          Length = 316

 Score = 33.5 bits (75), Expect = 7.6
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 265 AVWFCISSNTCVV-CLLLNTTSLWCLSLTLDPSLDKWQAAWTMSVVI 402
           AVWF +SS   ++ C  +  T++ C++LT+  +L  +   WT S+ +
Sbjct: 52  AVWFHLSSKRVILPCASVCMTTVLCITLTVPSALSLYLCFWTYSICV 98


>tr|A6SIR2|A6SIR2_BOTFB Putative uncharacterized protein
           OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_12517
           PE=4 SV=1
          Length = 384

 Score = 33.5 bits (75), Expect = 7.6
 Identities = 13/40 (32%), Positives = 26/40 (65%)
 Frame = -1

Query: 167 TWALQSPGLVVINHAAHVLVSLIKLRNTSPLYIGGGEIIT 48
           T  +Q  GL +++ A+++++  IK+   +P Y+ GG+ IT
Sbjct: 140 TGIIQGKGLRMVSGASNIIIQNIKIEEINPKYVWGGDAIT 179


>tr|A3ZX45|A3ZX45_9PLAN Putative phosphoketolase OS=Blastopirellula
           marina DSM 3645 GN=DSM3645_27618 PE=4 SV=1
          Length = 789

 Score = 33.1 bits (74), Expect = 9.9
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
 Frame = -3

Query: 198 QPHGIYGHHLNMGIAESRVGSDKPCCTCIGFSYQAQEYLTTVH---WRR*DHNKGYLRGI 28
           QPH  + H L+    +     DKP    + F++ A  Y T +H   +RR +H   ++RG 
Sbjct: 661 QPHSEHPHGLSDVDFDELFTKDKP----VIFAFHA--YPTLIHQLTYRRTNHANIHVRGY 714

Query: 27  KDEGSTTT 4
           K+EG+ TT
Sbjct: 715 KEEGTITT 722


>tr|A9UZV7|A9UZV7_MONBE Predicted protein OS=Monosiga brevicollis
           GN=25592 PE=4 SV=1
          Length = 146

 Score = 33.1 bits (74), Expect = 9.9
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +1

Query: 268 VWFCISSNTCV---VCLLLNTTSLWCLSLTLDPSLDKWQAAWTMSVVILICTLLPYRPVT 438
           +W C++ +  V   +CL L+ +    LSL+L PSL  W + W  S+       +P  P+ 
Sbjct: 78  LWLCLALSGSVSVWLCLALSLSLSLALSLSLAPSLALWLSLWYFSL------FMPCEPI- 130

Query: 439 MHVPSS 456
            H P S
Sbjct: 131 -HFPLS 135


>tr|Q5KK67|Q5KK67_CRYNE Galactinol synthase, putative (Putative
           uncharacterized protein) OS=Cryptococcus neoformans
           GN=CNBC3100 PE=4 SV=1
          Length = 371

 Score = 33.1 bits (74), Expect = 9.9
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = -1

Query: 236 CVLCISKRPPRYTNP-MASMATTLTWALQSPGLVVINHAAHVLVSLIKLRNTSP 78
           C L + + P   T+P + S +   T  L + GLV+++ ++ VL SLI   NTSP
Sbjct: 161 CSLSMQQSPTSLTSPPIPSPSAPRTAHLLNSGLVILHPSSTVLASLIDFINTSP 214


>tr|Q0URG1|Q0URG1_PHANO Putative uncharacterized protein
           OS=Phaeosphaeria nodorum GN=SNOG_05653 PE=4 SV=2
          Length = 1412

 Score = 33.1 bits (74), Expect = 9.9
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 460 SKMMEHAWSQDDMAIKYKLKSQPTSSMPPAICLGRDPVSERDTISWWY 317
           S+  E  +++ D A  YKLK+ P  S+P A+C+        D I W Y
Sbjct: 667 SRARESYYNRLDQA-PYKLKAAPLGSVPNALCMSNGQGQRGDAIMWAY 713