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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916711
Clone id YMU001_000090_F09
Library
Length 478
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000090_F09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AAAAAGCCCCAAATCATTTAAGGAAAATTTTTCCAAATCCTTGTTGATACTCAAGGCAGT
AGAATGCTGCAACCGAGGTAAGTTCGTATAAGTAAACCACACGAGAGGTCGATATTTCGT
TTCGAGAAGGTCAAGAAACAAATCAAACCACCAAAAACTTACTTAAGCAGCCTAAGGGGC
TAAGCTTCCAACCTGTAGCCATTTCTCATTCTTGCTCTTTCTTTAGCAATGTCAACAGCC
TGAATTCTACACTAATGATGCTTGCACAAGCATGTGTTCCTCTAGCCTGCACTTGTTCAG
CATCAAAATGCCAGGAGGCATCATGCAGATACCTTCAGGAGCCCATTGTGTCTAAGGAGG
GCCTCAGTAGACGGTTCTCTTCCACGGAAATCCACAAACACCTTCAGTGGGGGTCGACCT
CCACCCAAGGCAATGACAGTTTCACGGAACCTCCTCCCTGTCTCCTTCACTGCCTGTT
■■Homology search results ■■ -
sp_hit_id P44573
Definition sp|P44573|OPDA_HAEIN Oligopeptidase A OS=Haemophilus influenzae
Align length 42
Score (bit) 48.5
E-value 2.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916711|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_F09.
         (478 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P44573|OPDA_HAEIN Oligopeptidase A OS=Haemophilus influenzae ...    49   2e-05
sp|P27237|OPDA_SALTY Oligopeptidase A OS=Salmonella typhimurium ...    47   4e-05
sp|P27298|OPDA_ECOLI Oligopeptidase A OS=Escherichia coli (strai...    47   6e-05
sp|P24171|DCP_ECOLI Peptidyl-dipeptidase dcp OS=Escherichia coli...    35   0.17 
sp|P27236|DCP_SALTY Peptidyl-dipeptidase dcp OS=Salmonella typhi...    35   0.22 
sp|P60371|KR106_HUMAN Keratin-associated protein 10-6 OS=Homo sa...    32   1.1  
sp|P60014|KR10A_HUMAN Keratin-associated protein 10-10 OS=Homo s...    32   1.9  
sp|Q6XHA7|ROCO9_DICDI Probable serine/threonine-protein kinase r...    32   1.9  
sp|Q7YSJ4|PSIF_DICDI Protein psiF OS=Dictyostelium discoideum GN...    30   4.2  
sp|Q8CGB6|TENC1_MOUSE Tensin-like C1 domain-containing phosphata...    30   5.6  
sp|P60369|KR103_HUMAN Keratin-associated protein 10-3 OS=Homo sa...    30   7.2  
sp|P42676|NEUL_RAT Neurolysin, mitochondrial OS=Rattus norvegicu...    29   9.4  
sp|P42675|NEUL_RABIT Neurolysin, mitochondrial OS=Oryctolagus cu...    29   9.4  
sp|Q02038|NEUL_PIG Neurolysin, mitochondrial OS=Sus scrofa GN=NL...    29   9.4  
sp|Q91YP2|NEUL_MOUSE Neurolysin, mitochondrial OS=Mus musculus G...    29   9.4  
sp|A2VDQ5|NEUL_BOVIN Neurolysin, mitochondrial OS=Bos taurus GN=...    29   9.4  
sp|Q7CUX4|ADEC2_AGRT5 Adenine deaminase 2 OS=Agrobacterium tumef...    29   9.4  

>sp|P44573|OPDA_HAEIN Oligopeptidase A OS=Haemophilus influenzae
           GN=prlC PE=3 SV=1
          Length = 681

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 19/42 (45%), Positives = 29/42 (69%)
 Frame = -3

Query: 461 TGRRFRETVIALGGGRPPLKVFVDFRGREPSTEALLRHNGLL 336
           TG+ F + ++  GG   P+++F  FRGREP  +ALLRH G++
Sbjct: 639 TGKSFLDEILTRGGSEEPMELFKRFRGREPQLDALLRHKGIM 680


>sp|P27237|OPDA_SALTY Oligopeptidase A OS=Salmonella typhimurium
           GN=prlC PE=1 SV=1
          Length = 680

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 18/43 (41%), Positives = 29/43 (67%)
 Frame = -3

Query: 467 KETGRRFRETVIALGGGRPPLKVFVDFRGREPSTEALLRHNGL 339
           +ETG+ F + ++  GG   P+++F  FRGREP  +A+L H G+
Sbjct: 636 RETGQSFLDNILTRGGSEEPMELFKRFRGREPQLDAMLEHYGI 678


>sp|P27298|OPDA_ECOLI Oligopeptidase A OS=Escherichia coli (strain
           K12) GN=prlC PE=3 SV=3
          Length = 680

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 18/43 (41%), Positives = 29/43 (67%)
 Frame = -3

Query: 467 KETGRRFRETVIALGGGRPPLKVFVDFRGREPSTEALLRHNGL 339
           +ETG+ F + +++ GG   P+ +F  FRGREP  +A+L H G+
Sbjct: 636 RETGQSFLDNILSRGGSEEPMDLFKRFRGREPQLDAMLEHYGI 678


>sp|P24171|DCP_ECOLI Peptidyl-dipeptidase dcp OS=Escherichia coli
           (strain K12) GN=dcp PE=1 SV=4
          Length = 681

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -3

Query: 467 KETGRRFRETVIALGGGRPPLKVFVDFRGREPSTEALLRHNGL 339
           +E G RFRE +++ G      +++  +RG+ P    +L+H GL
Sbjct: 637 RENGLRFREAILSRGNSEDLERLYRQWRGKAPKIMPMLQHRGL 679


>sp|P27236|DCP_SALTY Peptidyl-dipeptidase dcp OS=Salmonella
           typhimurium GN=dcp PE=1 SV=1
          Length = 680

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 14/43 (32%), Positives = 26/43 (60%)
 Frame = -3

Query: 467 KETGRRFRETVIALGGGRPPLKVFVDFRGREPSTEALLRHNGL 339
           +E G+RFR+ ++A G       ++  +RG EP  + +L++ GL
Sbjct: 636 RENGQRFRDAILARGNSTDLETLYSAWRGHEPHIDPMLQYRGL 678


>sp|P60371|KR106_HUMAN Keratin-associated protein 10-6 OS=Homo
           sapiens GN=KRTAP10-6 PE=2 SV=1
          Length = 365

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 183 SFQPVAISHSCSFFSNVNSLNSTLMMLAQACVPL-ACTCSASKCQEASCR 329
           S QP   + SC   S+  SL    +  +  CVP+ +C  SAS CQ + CR
Sbjct: 287 SCQPACCTASCCRSSSSVSLLCHPVCKSTCCVPVPSCGASASSCQPSCCR 336


>sp|P60014|KR10A_HUMAN Keratin-associated protein 10-10 OS=Homo
           sapiens GN=KRTAP10-10 PE=1 SV=1
          Length = 251

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 183 SFQPVAISHSCSFFSNVNSLNSTLMMLAQACVPL-ACTCSASKCQEASCR 329
           S QP   + SC   S+  SL    +  +  CVP+ +C  SAS CQ + CR
Sbjct: 173 SCQPACCTASCCRPSSSVSLLCHPVCKSTCCVPVPSCGASASSCQPSCCR 222


>sp|Q6XHA7|ROCO9_DICDI Probable serine/threonine-protein kinase roco9
            OS=Dictyostelium discoideum GN=roco9 PE=3 SV=1
          Length = 3365

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +1

Query: 298  QHQNARRHHADTFRSPLCLRRASVDGSLPRKSTNTFSGGRPPPKAMTVSRNLLPVSF 468
            QHQ+   HH    ++ + L R S+ GS   +S +  +GG       + S N  P+ F
Sbjct: 2687 QHQHQHHHHQQQQQTSINLNRLSISGSPSLRSISIRNGGNINTLNSSGSNNSSPLKF 2743


>sp|Q7YSJ4|PSIF_DICDI Protein psiF OS=Dictyostelium discoideum
           GN=psiF PE=1 SV=1
          Length = 708

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
 Frame = +3

Query: 204 SHSCSFFSNV---NSLNSTLMMLAQACVPLACTCSAS-KCQEASCR 329
           S  C F   V    SL +T       CVP   TCS+S KCQ++ CR
Sbjct: 546 SEGCIFTPIVCEQTSLCNTFTCSVGKCVPTPITCSSSVKCQDSICR 591


>sp|Q8CGB6|TENC1_MOUSE Tensin-like C1 domain-containing phosphatase
           OS=Mus musculus GN=Tenc1 PE=1 SV=1
          Length = 1400

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
 Frame = +1

Query: 301 HQNARRHHADTFRSPLCLRRASVDGS-------LPRKSTNTFSGGRPPPKAMTVS 444
           ++N  +HH D+    L   R  +DGS       +PR++    S   PPP  ++VS
Sbjct: 456 YENFNQHHEDSVDGALAHTRGPLDGSPYAQVQRVPRQTPPAPSPELPPPPMLSVS 510
tr_hit_id Q6K9T1
Definition tr|Q6K9T1|Q6K9T1_ORYSJ Os02g0830100 protein OS=Oryza sativa subsp. japonica
Align length 51
Score (bit) 85.5
E-value 1.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916711|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_F09.
         (478 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6K9T1|Q6K9T1_ORYSJ Os02g0830100 protein OS=Oryza sativa subs...    86   1e-15
tr|B8AF81|B8AF81_ORYSI Putative uncharacterized protein OS=Oryza...    86   1e-15
tr|A3ACZ7|A3ACZ7_ORYSJ Putative uncharacterized protein OS=Oryza...    86   1e-15
tr|A7R431|A7R431_VITVI Chromosome undetermined scaffold_611, who...    85   2e-15
tr|A5ATE5|A5ATE5_VITVI Putative uncharacterized protein OS=Vitis...    85   2e-15
tr|Q9LXA6|Q9LXA6_ARATH Oligopeptidase A-like protein OS=Arabidop...    84   5e-15
tr|Q9LSL3|Q9LSL3_ARATH Oligopeptidase A OS=Arabidopsis thaliana ...    84   5e-15
tr|Q94AM1|Q94AM1_ARATH Putative oligopeptidase A OS=Arabidopsis ...    84   5e-15
tr|Q949P2|Q949P2_ARATH Putative oligopeptidase A OS=Arabidopsis ...    84   5e-15
tr|A7R468|A7R468_VITVI Chromosome undetermined scaffold_622, who...    80   7e-14
tr|B4FW57|B4FW57_MAIZE Putative uncharacterized protein OS=Zea m...    79   9e-14
tr|A9YWR9|A9YWR9_MEDTR Oligopeptidase A OS=Medicago truncatula P...    78   3e-13
tr|B2IVL4|B2IVL4_NOSP7 Peptidase M3A and M3B, thimet/oligopeptid...    74   4e-12
tr|B0C6I6|B0C6I6_ACAM1 Oligopeptidase A OS=Acaryochloris marina ...    74   4e-12
tr|B4VMW5|B4VMW5_9CYAN Peptidase family M3 OS=Microcoleus chthon...    73   6e-12
tr|Q8DJP1|Q8DJP1_THEEB Oligopeptidase A OS=Thermosynechococcus e...    72   2e-11
tr|Q8YYH0|Q8YYH0_ANASP Oligopeptidase A OS=Anabaena sp. (strain ...    71   2e-11
tr|Q3M4K4|Q3M4K4_ANAVT Oligopeptidase A. Metallo peptidase. MERO...    71   2e-11
tr|B4BUZ1|B4BUZ1_9CHRO Oligopeptidase A OS=Cyanothece sp. PCC 88...    70   4e-11
tr|A0ZC62|A0ZC62_NODSP Oligopeptidase A OS=Nodularia spumigena C...    70   4e-11
tr|A7PQL4|A7PQL4_VITVI Chromosome chr6 scaffold_25, whole genome...    70   4e-11
tr|B1X1T6|B1X1T6_CYAA5 Oligopeptidase A OS=Cyanothece (strain AT...    70   5e-11
tr|A6C199|A6C199_9PLAN Oligopeptidase A OS=Planctomyces maris DS...    70   7e-11
tr|B4B3J1|B4B3J1_9CHRO Oligopeptidase A OS=Cyanothece sp. PCC 78...    69   9e-11
tr|A8HSS0|A8HSS0_CHLRE Oligopeptidase A OS=Chlamydomonas reinhar...    69   9e-11
tr|Q5MZE7|Q5MZE7_SYNP6 Oligopeptidase A OS=Synechococcus sp. (st...    69   1e-10
tr|Q31MI1|Q31MI1_SYNE7 Oligopeptidase A. Metallo peptidase. MERO...    69   1e-10
tr|B8HJM8|B8HJM8_9CHRO Oligopeptidase A OS=Cyanothece sp. PCC 74...    69   1e-10
tr|B7JYR7|B7JYR7_SYNP8 Oligopeptidase A OS=Synechococcus sp. (st...    69   2e-10
tr|B8CE50|B8CE50_THAPS Oligopeptidase OS=Thalassiosira pseudonan...    69   2e-10

>tr|Q6K9T1|Q6K9T1_ORYSJ Os02g0830100 protein OS=Oryza sativa subsp.
           japonica GN=OJ1124_D06.18 PE=2 SV=1
          Length = 770

 Score = 85.5 bits (210), Expect = 1e-15
 Identities = 40/51 (78%), Positives = 47/51 (92%)
 Frame = -3

Query: 476 QAVKETGRRFRETVIALGGGRPPLKVFVDFRGREPSTEALLRHNGLLKVSA 324
           +A++ETGRRFRETV+ALGGG+ PL+VFV FRGREPS EALLRHNGLL V+A
Sbjct: 719 KAIEETGRRFRETVLALGGGKSPLEVFVSFRGREPSPEALLRHNGLLPVAA 769


>tr|B8AF81|B8AF81_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09551 PE=4 SV=1
          Length = 862

 Score = 85.5 bits (210), Expect = 1e-15
 Identities = 40/51 (78%), Positives = 47/51 (92%)
 Frame = -3

Query: 476 QAVKETGRRFRETVIALGGGRPPLKVFVDFRGREPSTEALLRHNGLLKVSA 324
           +A++ETGRRFRETV+ALGGG+ PL+VFV FRGREPS EALLRHNGLL V+A
Sbjct: 811 KAIEETGRRFRETVLALGGGKSPLEVFVSFRGREPSPEALLRHNGLLPVAA 861


>tr|A3ACZ7|A3ACZ7_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_008669 PE=3 SV=1
          Length = 776

 Score = 85.5 bits (210), Expect = 1e-15
 Identities = 40/51 (78%), Positives = 47/51 (92%)
 Frame = -3

Query: 476 QAVKETGRRFRETVIALGGGRPPLKVFVDFRGREPSTEALLRHNGLLKVSA 324
           +A++ETGRRFRETV+ALGGG+ PL+VFV FRGREPS EALLRHNGLL V+A
Sbjct: 725 KAIEETGRRFRETVLALGGGKSPLEVFVSFRGREPSPEALLRHNGLLPVAA 775


>tr|A7R431|A7R431_VITVI Chromosome undetermined scaffold_611, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00004136001 PE=4 SV=1
          Length = 78

 Score = 84.7 bits (208), Expect = 2e-15
 Identities = 39/51 (76%), Positives = 48/51 (94%)
 Frame = -3

Query: 476 QAVKETGRRFRETVIALGGGRPPLKVFVDFRGREPSTEALLRHNGLLKVSA 324
           +AV+ETG++FRETV+ALGGG+ PL+VFV+FRGREPS EALLRHNGLL V+A
Sbjct: 26  KAVEETGKKFRETVLALGGGKAPLEVFVEFRGREPSPEALLRHNGLLSVTA 76


>tr|A5ATE5|A5ATE5_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_026837 PE=3 SV=1
          Length = 873

 Score = 84.7 bits (208), Expect = 2e-15
 Identities = 39/51 (76%), Positives = 48/51 (94%)
 Frame = -3

Query: 476 QAVKETGRRFRETVIALGGGRPPLKVFVDFRGREPSTEALLRHNGLLKVSA 324
           +AV+ETG++FRETV+ALGGG+ PL+VFV+FRGREPS EALLRHNGLL V+A
Sbjct: 821 KAVEETGKKFRETVLALGGGKAPLEVFVEFRGREPSPEALLRHNGLLSVTA 871


>tr|Q9LXA6|Q9LXA6_ARATH Oligopeptidase A-like protein OS=Arabidopsis
           thaliana GN=F12B17_110 PE=3 SV=1
          Length = 723

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 39/51 (76%), Positives = 45/51 (88%)
 Frame = -3

Query: 476 QAVKETGRRFRETVIALGGGRPPLKVFVDFRGREPSTEALLRHNGLLKVSA 324
           +AVKETG+RFR T++ALGGG+ PLKVFV+FRGREPS E LLRHNGLL  SA
Sbjct: 673 KAVKETGQRFRNTILALGGGKAPLKVFVEFRGREPSPEPLLRHNGLLAASA 723


>tr|Q9LSL3|Q9LSL3_ARATH Oligopeptidase A OS=Arabidopsis thaliana
           PE=3 SV=1
          Length = 714

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 39/51 (76%), Positives = 45/51 (88%)
 Frame = -3

Query: 476 QAVKETGRRFRETVIALGGGRPPLKVFVDFRGREPSTEALLRHNGLLKVSA 324
           +AVKETG+RFR T++ALGGG+ PLKVFV+FRGREPS E LLRHNGLL  SA
Sbjct: 662 KAVKETGQRFRNTILALGGGKAPLKVFVEFRGREPSPEPLLRHNGLLAASA 712


>tr|Q94AM1|Q94AM1_ARATH Putative oligopeptidase A OS=Arabidopsis
           thaliana GN=At5g65620 PE=2 SV=1
          Length = 791

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 39/51 (76%), Positives = 45/51 (88%)
 Frame = -3

Query: 476 QAVKETGRRFRETVIALGGGRPPLKVFVDFRGREPSTEALLRHNGLLKVSA 324
           +AVKETG+RFR T++ALGGG+ PLKVFV+FRGREPS E LLRHNGLL  SA
Sbjct: 739 KAVKETGQRFRNTILALGGGKAPLKVFVEFRGREPSPEPLLRHNGLLAASA 789


>tr|Q949P2|Q949P2_ARATH Putative oligopeptidase A OS=Arabidopsis
           thaliana GN=At5g10540 PE=2 SV=1
          Length = 701

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 39/51 (76%), Positives = 45/51 (88%)
 Frame = -3

Query: 476 QAVKETGRRFRETVIALGGGRPPLKVFVDFRGREPSTEALLRHNGLLKVSA 324
           +AVKETG+RFR T++ALGGG+ PLKVFV+FRGREPS E LLRHNGLL  SA
Sbjct: 651 KAVKETGQRFRNTILALGGGKAPLKVFVEFRGREPSPEPLLRHNGLLAASA 701


>tr|A7R468|A7R468_VITVI Chromosome undetermined scaffold_622, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00004192001 PE=3 SV=1
          Length = 329

 Score = 79.7 bits (195), Expect = 7e-14
 Identities = 37/48 (77%), Positives = 44/48 (91%)
 Frame = -3

Query: 467 KETGRRFRETVIALGGGRPPLKVFVDFRGREPSTEALLRHNGLLKVSA 324
           KETG++ RETV+ALGGG+ PL+VFV+FRGREPS EALLRHNGLL V+A
Sbjct: 280 KETGKKSRETVLALGGGKAPLEVFVEFRGREPSPEALLRHNGLLSVTA 327