NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916714
Clone id YMU001_000090_F12
Library
Length 536
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000090_F12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CATTCTTCAAGAGATGATGTATCTAAACAAGGATGTAGCAGATCTTGAGCTGTGGTCTCA
AGAGAGAAGTAAAGCTGTCGAGAGAGCAGCCTATGGTTTTACTGCCCGAGTGGAGGCAAG
GATACGACTTATCAGACAAAGGCTTCATAGCAATGCGTCTCCACCAAGAAATGGAGGGCA
GTGATGTGATTGGCGATCCTGTATCCGGACCGAGTCAAGACTTGCTTATGTACGAACAAG
GATTGCTATATAGGCAAGGGAGACAGTGAAAAAGTATTGGTAGCTGCAGGTCTAAGGAAA
TGGCAAAGATGAATATTGTCAAATGTGAATGTTGAGCATCCCATTTTATGAAATTCCTGT
GATTCTACCAAGGGAAGAGCTATCGATTGTAAATGTGCACAACTCTGGCTTGAGGGAGAG
AGTGTTCAAAACTTTGGAGGCTCTACAAGATTTGATCCCTCACAGTATCCGGCCTCTTCT
GTGCAGACTGCGACATTTGCCTTACATCCCAATTTTGTTCTGTCAGAGAGTGGGGG
■■Homology search results ■■ -
sp_hit_id Q9SGG3
Definition sp|Q9SGG3|ALA5_ARATH Putative phospholipid-transporting ATPase 5 OS=Arabidopsis thaliana
Align length 53
Score (bit) 57.4
E-value 4.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916714|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_F12.
         (536 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9SGG3|ALA5_ARATH Putative phospholipid-transporting ATPase 5...    57   4e-08
sp|Q9LNQ4|ALA4_ARATH Putative phospholipid-transporting ATPase 4...    57   7e-08
sp|Q9SLK6|ALA6_ARATH Putative phospholipid-transporting ATPase 6...    52   2e-06
sp|Q9LVK9|ALA7_ARATH Putative phospholipid-transporting ATPase 7...    49   1e-05
sp|O73606|KCNG2_CHICK Potassium voltage-gated channel subfamily ...    30   5.7  
sp|Q7ZTU9|TBX2_DANRE T-box transcription factor TBX2b OS=Danio r...    30   7.4  
sp|P26630|PAX6_DANRE Paired box protein Pax[Zf-a] OS=Danio rerio...    30   9.7  

>sp|Q9SGG3|ALA5_ARATH Putative phospholipid-transporting ATPase 5
            OS=Arabidopsis thaliana GN=ALA5 PE=2 SV=1
          Length = 1228

 Score = 57.4 bits (137), Expect = 4e-08
 Identities = 25/53 (47%), Positives = 38/53 (71%)
 Frame = +2

Query: 2    ILQEMMYLNKDVADLELWSQERSKAVERAAYGFTARVEARIRLIRQRLHSNAS 160
            I+QE+ Y  +D+ D  LW++ER+KA E+   GFTARV+A+IR +R +L+   S
Sbjct: 1160 IIQEIKYYGRDIEDARLWTRERTKAREKTKIGFTARVDAKIRHLRSKLNKKQS 1212


>sp|Q9LNQ4|ALA4_ARATH Putative phospholipid-transporting ATPase 4
            OS=Arabidopsis thaliana GN=ALA4 PE=2 SV=2
          Length = 1216

 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 25/53 (47%), Positives = 38/53 (71%)
 Frame = +2

Query: 2    ILQEMMYLNKDVADLELWSQERSKAVERAAYGFTARVEARIRLIRQRLHSNAS 160
            I+QE+ Y  +DV D  +W++ER+KA E+   GFTARV+A+IR +R +L+   S
Sbjct: 1148 IIQEIKYYKRDVEDRRMWTRERTKAREKTKIGFTARVDAKIRHLRSKLNKKQS 1200


>sp|Q9SLK6|ALA6_ARATH Putative phospholipid-transporting ATPase 6
            OS=Arabidopsis thaliana GN=ALA6 PE=1 SV=1
          Length = 1244

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = +2

Query: 2    ILQEMMYLNKDVADLELWSQERSKAVERAAYGFTARVEARIRLIRQRLHSNAS 160
            I+QE+ +   DV D  +W +E+SKA E+   GFTARV+A+IR +R RL    S
Sbjct: 1173 IIQEIKHFRIDVEDERMWKREKSKAREKTKIGFTARVDAKIRQLRGRLQRKHS 1225


>sp|Q9LVK9|ALA7_ARATH Putative phospholipid-transporting ATPase 7
            OS=Arabidopsis thaliana GN=ALA7 PE=2 SV=2
          Length = 1247

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = +2

Query: 2    ILQEMMYLNKDVADLELWSQERSKAVERAAYGFTARVEARIRLIRQRLHSNAS 160
            I+QE+ +   DV D  +W++ERSKA E+   G TARV+A+IR +R RL    S
Sbjct: 1171 IIQEIKHFRIDVQDECMWTRERSKAREKTKIGVTARVDAKIRQLRGRLQRKHS 1223


>sp|O73606|KCNG2_CHICK Potassium voltage-gated channel subfamily G
           member 2 OS=Gallus gallus GN=KCNG2 PE=2 SV=1
          Length = 518

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -2

Query: 283 LPILFHCLPCLYSNPCSYISKS*LGPDTGSPITSLPSISWWRRIAM 146
           L +LF C+     +P  Y+++S LG       TS+P+  WW  I+M
Sbjct: 372 LLLLFLCVAMALFSPLVYLAESELGAK--QEFTSIPTSYWWAVISM 415


>sp|Q7ZTU9|TBX2_DANRE T-box transcription factor TBX2b OS=Danio
           rerio GN=tbx2b PE=2 SV=3
          Length = 677

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = -1

Query: 482 TEEAGYCEGSNLVEPPKF*TLSPSSQSCAHLQSIALPLVESQEF 351
           TE +G     +   P    T SPS     HLQS+AL  + SQ+F
Sbjct: 419 TENSGISGSKDSFSPLMVQTESPSHFGAGHLQSLALSGLHSQQF 462


>sp|P26630|PAX6_DANRE Paired box protein Pax[Zf-a] OS=Danio rerio
           GN=pax6a PE=2 SV=1
          Length = 437

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
 Frame = -2

Query: 247 SNPCSYISKS*LG------PDTGSPITSLPSISWWRRIAMKPLSDKSYPCLHSGSKTI-G 89
           + P S+ S S LG       +T S +  +PS +    + M+P    SY C+   S ++ G
Sbjct: 322 TTPVSFTSGSMLGRSDTALTNTYSALPPMPSFTMANNLPMQPSQTSSYSCMLPTSPSVNG 381

Query: 88  CSLDSFT 68
            S D++T
Sbjct: 382 RSYDTYT 388
tr_hit_id Q5Z656
Definition tr|Q5Z656|Q5Z656_ORYSJ Putative ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 OS=Oryza sativa subsp. japonica
Align length 52
Score (bit) 62.0
E-value 2.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916714|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_F12.
         (536 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5Z656|Q5Z656_ORYSJ Putative ATPase, aminophospholipid transp...    62   2e-08
tr|Q0DBG8|Q0DBG8_ORYSJ Os06g0565900 protein (Fragment) OS=Oryza ...    62   2e-08
tr|B8B3T2|B8B3T2_ORYSI Putative uncharacterized protein OS=Oryza...    62   2e-08
tr|A3BCV4|A3BCV4_ORYSJ Putative uncharacterized protein OS=Oryza...    62   2e-08
tr|A7P6M9|A7P6M9_VITVI Chromosome chr9 scaffold_7, whole genome ...    56   1e-06
tr|A7QCR8|A7QCR8_VITVI Chromosome undetermined scaffold_79, whol...    47   8e-04
tr|A5B8B8|A5B8B8_VITVI Putative uncharacterized protein OS=Vitis...    47   8e-04
tr|A9RVW0|A9RVW0_PHYPA Predicted protein OS=Physcomitrella paten...    43   0.009
tr|A9SY94|A9SY94_PHYPA Predicted protein OS=Physcomitrella paten...    43   0.012
tr|Q9Y1Y9|Q9Y1Y9_9METZ Protein tyrosine kinase OS=Ephydatia fluv...    37   0.85 
tr|A4JUM3|A4JUM3_BURVG ParB family protein OS=Burkholderia vietn...    34   4.2  
tr|Q4QAZ2|Q4QAZ2_LEIMA Putative uncharacterized protein OS=Leish...    33   7.2  
tr|A4I0L7|A4I0L7_LEIIN Putative uncharacterized protein OS=Leish...    33   7.2  
tr|Q2GDN6|Q2GDN6_NEOSM Putative uncharacterized protein OS=Neori...    33   9.3  

>tr|Q5Z656|Q5Z656_ORYSJ Putative ATPase, aminophospholipid transporter
            (APLT), class I, type 8A, member 1 OS=Oryza sativa subsp.
            japonica GN=P0567G03.5 PE=4 SV=1
          Length = 1222

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = +2

Query: 2    ILQEMMYLNKDVADLELWSQERSKAVERAAYGFTARVEARIRLIRQRLHSNA 157
            ++QE+ YL KDV D  +W +ERSKA +R   GFTARV+A+I+ IR +LH  A
Sbjct: 1162 VIQEIKYLKKDVEDQTMWKRERSKARQRTKIGFTARVDAKIKQIRGKLHKKA 1213


>tr|Q0DBG8|Q0DBG8_ORYSJ Os06g0565900 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os06g0565900 PE=4 SV=1
          Length = 652

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = +2

Query: 2   ILQEMMYLNKDVADLELWSQERSKAVERAAYGFTARVEARIRLIRQRLHSNA 157
           ++QE+ YL KDV D  +W +ERSKA +R   GFTARV+A+I+ IR +LH  A
Sbjct: 592 VIQEIKYLKKDVEDQTMWKRERSKARQRTKIGFTARVDAKIKQIRGKLHKKA 643


>tr|B8B3T2|B8B3T2_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_23406 PE=4 SV=1
          Length = 1222

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = +2

Query: 2    ILQEMMYLNKDVADLELWSQERSKAVERAAYGFTARVEARIRLIRQRLHSNA 157
            ++QE+ YL KDV D  +W +ERSKA +R   GFTARV+A+I+ IR +LH  A
Sbjct: 1162 VIQEIKYLKKDVEDQTMWKRERSKARQRTKIGFTARVDAKIKQIRGKLHKKA 1213


>tr|A3BCV4|A3BCV4_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_020876 PE=4 SV=1
          Length = 1165

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = +2

Query: 2    ILQEMMYLNKDVADLELWSQERSKAVERAAYGFTARVEARIRLIRQRLHSNA 157
            ++QE+ YL KDV D  +W +ERSKA +R   GFTARV+A+I+ IR +LH  A
Sbjct: 1105 VIQEIKYLKKDVEDQTMWKRERSKARQRTKIGFTARVDAKIKQIRGKLHKKA 1156


>tr|A7P6M9|A7P6M9_VITVI Chromosome chr9 scaffold_7, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00034132001
            PE=4 SV=1
          Length = 1085

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 26/54 (48%), Positives = 37/54 (68%)
 Frame = +2

Query: 2    ILQEMMYLNKDVADLELWSQERSKAVERAAYGFTARVEARIRLIRQRLHSNASP 163
            I+QE+ Y  KDV D  +W++ERSKA +    GF+ARV+A+IR +R +L    SP
Sbjct: 1022 IIQEIKYYRKDVEDQYMWTRERSKARQETKIGFSARVDAKIRQLRGKLQKKHSP 1075


>tr|A7QCR8|A7QCR8_VITVI Chromosome undetermined scaffold_79, whole
            genome shotgun sequence OS=Vitis vinifera
            GN=GSVIVT00035521001 PE=4 SV=1
          Length = 1147

 Score = 46.6 bits (109), Expect = 8e-04
 Identities = 19/49 (38%), Positives = 33/49 (67%)
 Frame = +2

Query: 2    ILQEMMYLNKDVADLELWSQERSKAVERAAYGFTARVEARIRLIRQRLH 148
            ++QEM +  KD+ D  +W +E++ +      GF+ARVEA+I  ++Q+LH
Sbjct: 1095 VIQEMKHFRKDIMDNAMWLREQNNSKTTTHVGFSARVEAKISRLKQQLH 1143


>tr|A5B8B8|A5B8B8_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_010090 PE=4 SV=1
          Length = 1399

 Score = 46.6 bits (109), Expect = 8e-04
 Identities = 19/49 (38%), Positives = 33/49 (67%)
 Frame = +2

Query: 2    ILQEMMYLNKDVADLELWSQERSKAVERAAYGFTARVEARIRLIRQRLH 148
            ++QEM +  KD+ D  +W +E++ +      GF+ARVEA+I  ++Q+LH
Sbjct: 1347 VIQEMKHFRKDIMDNAMWLREQNNSKTXTHVGFSARVEAKISRLKQQLH 1395


>tr|A9RVW0|A9RVW0_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_205967 PE=4 SV=1
          Length = 1219

 Score = 43.1 bits (100), Expect = 0.009
 Identities = 19/53 (35%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
 Frame = +2

Query: 2    ILQEMMYLNKDVADLELWSQERSKAVERAAYGFTARVEARIRL--IRQRLHSN 154
            ++QE+ YL K + D +++ QER+KAV++   GF++RV+A + +   +QR + +
Sbjct: 1127 LIQEIHYLQKHITDPDMYKQERTKAVQKTHQGFSSRVKASMTMQETKQRFYGD 1179


>tr|A9SY94|A9SY94_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_189702 PE=4 SV=1
          Length = 1251

 Score = 42.7 bits (99), Expect = 0.012
 Identities = 20/53 (37%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
 Frame = +2

Query: 2    ILQEMMYLNKDVADLELWSQERSKAVERAAYGFTARVEARI--RLIRQRLHSN 154
            ++QE+ YL K + D +++ QER+KAVE+   G ++RV A +   L +QR + +
Sbjct: 1157 LIQEIHYLQKHITDPDMYKQERTKAVEKTHQGVSSRVRASLSMELTKQRFYGD 1209


>tr|Q9Y1Y9|Q9Y1Y9_9METZ Protein tyrosine kinase OS=Ephydatia
           fluviatilis GN=EfPTK13 PE=2 SV=2
          Length = 2069

 Score = 36.6 bits (83), Expect = 0.85
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
 Frame = -1

Query: 455 SNLVEPPKF*TLSPSSQS---CAHLQSIALPLVESQEFHKMGCSTFTFDNIHLCHFLRPA 285
           SNL  PP+   ++P SQ+    + L   + P V S ++   GC+T +F NI L     P 
Sbjct: 576 SNLSPPPQALAVNPVSQTLYWASVLPDGSPPSVGSTQYSLAGCNT-SFVNITLTDIRPPV 634

Query: 284 ATNTFSLSPLPI 249
            T+TFS   +PI
Sbjct: 635 YTSTFSCLQIPI 646