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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916722
Clone id YMU001_000090_G08
Library
Length 584
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000090_G08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GCGTCGCGGAGGTACCGTGTCCATGCTCAAGCCGTAAAAGTGGCACCCCTCACGAAGGTG
CCTCACAATGGGCCTCAGTACCAGCGCTGGTTCCAAGAGTTGCCACTACCAAACGTCCCC
AAAAGTCACCGCATGGCAGGCGCCTACTCGTAGAGAATTTTAACCCTCAATTTCCCAAAC
AAATTTCCCTTAAGCCTTAATGTAGAGGGTCTTTACTAGAGGACTTTTCCACTAGAAACC
AAGATTTACTTTAGAATGAGGATTACTTCACCGCATTTCTTCAAAGCAAACTTGAGATGT
CACGTTTAAAATATACTTAAAAAATGCTGCAAATAGCGAGTTTGTGATACCATAGGTAAA
TATCTCGAAATTTTTTTGATGCATTTATCGGTATTTACACTCAAAAGGCCATTTTATTCA
TTGTTTCAATGCAAACTCAAAGTGCCAGAGGCTGATGACGCAGGTGTTTTTAAAACCCAT
TAAATTTATAAGGTGTAAGTTCGAAGACCACAAGCCATGCTTTAAAAAATTTGGTCTATG
TCATAGTTACCAGCATACACACACAAATTCCCTACATCTTTCTA
■■Homology search results ■■ -
sp_hit_id Q8BGT5
Definition sp|Q8BGT5|ALAT2_MOUSE Alanine aminotransferase 2 OS=Mus musculus
Align length 51
Score (bit) 32.0
E-value 2.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916722|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_G08.
         (584 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8BGT5|ALAT2_MOUSE Alanine aminotransferase 2 OS=Mus musculus...    32   2.3  
sp|P42098|ZP3_PIG Zona pellucida sperm-binding protein 3 OS=Sus ...    30   8.8  

>sp|Q8BGT5|ALAT2_MOUSE Alanine aminotransferase 2 OS=Mus musculus
           GN=Gpt2 PE=2 SV=1
          Length = 522

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +3

Query: 18  CPCSSRKSGTPHEGASQWASVPALVPRVATTKRPQKSPHGRRLLVENFNPQ 170
           CP +S   G  H  A+  AS    V       RP++SP  R L +E+ NPQ
Sbjct: 13  CPRASGPWGRSHSSAAAEASAALKV-------RPERSPRDRILTLESMNPQ 56


>sp|P42098|ZP3_PIG Zona pellucida sperm-binding protein 3 OS=Sus
           scrofa GN=ZP3 PE=1 SV=1
          Length = 421

 Score = 30.0 bits (66), Expect = 8.8
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 6   AEVPCPCSSRKSGTPHEGASQWASVPALVPRVATTKRPQKSPHGRRLLVENFNPQ 170
           AEVP  C   + G      S WA +P  VP   T    +K     RL+ EN++ +
Sbjct: 133 AEVPIECHYPRQGN----VSSWAILPTWVPFRTTVFSEEKLVFSLRLMEENWSAE 183
tr_hit_id B2UVR9
Definition tr|B2UVR9|B2UVR9_HELPS Putative uncharacterized protein OS=Helicobacter pylori (strain Shi470)
Align length 52
Score (bit) 34.7
E-value 4.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916722|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_G08.
         (584 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2UVR9|B2UVR9_HELPS Putative uncharacterized protein OS=Helic...    35   4.0  
tr|O26053|O26053_HELPY Putative uncharacterized protein OS=Helic...    34   6.9  
tr|B6JP20|B6JP20_HELP2 Putative uncharacterized protein OS=Helic...    34   6.9  
tr|B6SK43|B6SK43_MAIZE Putative uncharacterized protein OS=Zea m...    34   6.9  
tr|Q9ZJ99|Q9ZJ99_HELPJ Putative OS=Helicobacter pylori J99 GN=jh...    33   9.0  
tr|Q1CRG5|Q1CRG5_HELPH Putative uncharacterized protein OS=Helic...    33   9.0  
tr|B5Z9E0|B5Z9E0_HELPG Putative uncharacterized protein OS=Helic...    33   9.0  

>tr|B2UVR9|B2UVR9_HELPS Putative uncharacterized protein
           OS=Helicobacter pylori (strain Shi470) GN=HPSH_07830
           PE=4 SV=1
          Length = 211

 Score = 34.7 bits (78), Expect = 4.0
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = -3

Query: 513 LWSSNLHLINLMGFKNTCVISLWHFEFALKQ*IKWPFECKYR*MHQKNFEIF 358
           L +SN  ++ L+GFK   V  L+H + +++  IKWPF  +Y     + F +F
Sbjct: 155 LKTSNFRMLGLVGFKFQTV--LFHHDASIEVGIKWPFAFEYNSAFVRLFSVF 204


>tr|O26053|O26053_HELPY Putative uncharacterized protein
           OS=Helicobacter pylori GN=HP_1525 PE=4 SV=1
          Length = 211

 Score = 33.9 bits (76), Expect = 6.9
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = -3

Query: 513 LWSSNLHLINLMGFKNTCVISLWHFEFALKQ*IKWPFECKYR*MHQKNFEIF 358
           L +SN  ++ L+GFK   V  L+H + +++  IKWPF  +Y     + F +F
Sbjct: 155 LKTSNFRMLGLVGFKFQTV--LFHHDASIEVGIKWPFAFEYDSAFVRLFSVF 204


>tr|B6JP20|B6JP20_HELP2 Putative uncharacterized protein
           OS=Helicobacter pylori (strain P12) GN=HPP12_1500 PE=4
           SV=1
          Length = 211

 Score = 33.9 bits (76), Expect = 6.9
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = -3

Query: 513 LWSSNLHLINLMGFKNTCVISLWHFEFALKQ*IKWPFECKYR*MHQKNFEIF 358
           L +SN  ++ L+GFK   V  L+H + +++  IKWPF  +Y     + F +F
Sbjct: 155 LKTSNFRMLGLVGFKFQTV--LFHHDASIEVGIKWPFAFEYDSAFVRLFSVF 204


>tr|B6SK43|B6SK43_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 117

 Score = 33.9 bits (76), Expect = 6.9
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
 Frame = +3

Query: 9   EVPCPCSS-------RKSGTPHEGA-SQWASVPALVPRVATTKRPQKSPHGR-RLLVENF 161
           E PC CSS       R+ G  H G  S  +S+P  +PR    +RP   P GR R    + 
Sbjct: 31  ERPCRCSSTGISSSTRRPGLSHRGCPSSISSLPTRLPRFHGRRRPSHLPGGRPRPCPSHS 90

Query: 162 NPQFPKQISLKP 197
           +P  P   S +P
Sbjct: 91  SPFGPAAASTQP 102


>tr|Q9ZJ99|Q9ZJ99_HELPJ Putative OS=Helicobacter pylori J99
           GN=jhp_1414 PE=4 SV=1
          Length = 211

 Score = 33.5 bits (75), Expect = 9.0
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = -3

Query: 513 LWSSNLHLINLMGFKNTCVISLWHFEFALKQ*IKWPFECKYR*MHQKNFEIF 358
           L +SN  ++ L+GFK   V  L+H + +++  IKWPF  +Y     + F +F
Sbjct: 155 LKTSNFRMLGLVGFKFQTV--LFHHDASIEVGIKWPFAFEYDSPFVRLFSVF 204


>tr|Q1CRG5|Q1CRG5_HELPH Putative uncharacterized protein
           OS=Helicobacter pylori (strain HPAG1) GN=HPAG1_1390 PE=4
           SV=1
          Length = 211

 Score = 33.5 bits (75), Expect = 9.0
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = -3

Query: 513 LWSSNLHLINLMGFKNTCVISLWHFEFALKQ*IKWPFECKYR*MHQKNFEIF 358
           L +SN  ++ L+GFK   V  L+H + +++  IKWPF  +Y     + F +F
Sbjct: 155 LKTSNFRMLGLVGFKFQTV--LFHHDASIEVGIKWPFAFEYDSPFVRLFSVF 204


>tr|B5Z9E0|B5Z9E0_HELPG Putative uncharacterized protein
           OS=Helicobacter pylori (strain G27) GN=HPG27_1447 PE=4
           SV=1
          Length = 177

 Score = 33.5 bits (75), Expect = 9.0
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = -3

Query: 513 LWSSNLHLINLMGFKNTCVISLWHFEFALKQ*IKWPFECKYR*MHQKNFEIF 358
           L +SN  ++ L+GFK   V  L+H + +++  IKWPF  +Y     + F +F
Sbjct: 121 LKTSNFRMLGLVGFKFQTV--LFHHDASIEVGIKWPFAFEYDSPFVRLFSVF 170