BP916724 |
Clone id |
YMU001_000090_G10 |
Library |
YMU01 |
Length |
460 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000090_G10. |
Accession |
BP916724 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL34Contig1 |
Sequence |
CATGGTTCCACCTTATACCGGGAACTCTTGCTCATCTGCTGCTTCTGCCATTGAGTATGC GGTGCTGCACTTGAAGGTGAAGCATCTTGTTGTCATTGGCCACAGCCGATGTGGTGCCAT CAAAGCCTTGATGGGCATTGAAGAGGATGGGTCAAATAGGTTCAGCGAATTCATCGAAGA CTGGATTCTGATTTCGAAGACTGCCTCTAAGAAGGTGAAGAGCTTGCACCAATCTGCTGA ATTTACAGAGCAGTGTACAAAGTGTGAGAAGGAGAATGTAAACAATGCGTTGTGGAACTG CCTTTCATACCCATTTGTTAGAGAAAAGATGTCTTCAGGGGAGTTGACTCTTCATGGCGG TTACTATGATTTTGTGAACAATGCATTTGAGAGTTGGTCGGTAGATTTGGCATCAATGTC GAAGGTCGAAAAGGTGCATTAAGTGGGTACAGACTGTCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P46513 |
Definition |
sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis |
Align length |
135 |
Score (bit) |
127.0 |
E-value |
2.0e-29 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916724|Adiantum capillus-veneris mRNA, clone: YMU001_000090_G10. (460 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria... 127 2e-29 sp|P42737|CAH2_ARATH Carbonic anhydrase 2 OS=Arabidopsis thalian... 124 2e-28 sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis P... 124 2e-28 sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=... 123 4e-28 sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2... 123 4e-28 sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sa... 122 6e-28 sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=... 122 7e-28 sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicoti... 122 7e-28 sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeu... 122 1e-27 sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabid... 122 1e-27 sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinac... 121 1e-27 sp|O24855|CYNT_HELPY Carbonic anhydrase OS=Helicobacter pylori G... 57 4e-08 sp|Q9ZN54|CYNT_HELPJ Carbonic anhydrase OS=Helicobacter pylori J... 56 9e-08 sp|Q54735|CYNT_SYNY3 Carbonic anhydrase OS=Synechocystis sp. (st... 54 2e-07 sp|P27134|CYNT_SYNE7 Carbonic anhydrase OS=Synechococcus elongat... 52 2e-06 sp|P0ABE9|CYNT_ECOLI Carbonic anhydrase 1 OS=Escherichia coli (s... 46 7e-05 sp|P0ABF0|CYNT_ECO57 Carbonic anhydrase 1 OS=Escherichia coli O1... 46 7e-05 sp|Q9I262|CYNT_PSEAE Carbonic anhydrase OS=Pseudomonas aeruginos... 44 4e-04 sp|P45148|CAN_HAEIN Carbonic anhydrase 2 OS=Haemophilus influenz... 36 0.091 sp|Q9PQ79|SYI_UREPA Isoleucyl-tRNA synthetase OS=Ureaplasma parv... 32 1.3 sp|B2KIQ4|WDR76_RHIFE WD repeat-containing protein 76 OS=Rhinolo... 32 1.7 sp|Q5JRA6|MIA3_HUMAN Melanoma inhibitory activity protein 3 OS=H... 32 1.7 sp|Q3E9Z8|FB236_ARATH Putative F-box protein At4g17780 OS=Arabid... 30 5.0 sp|P53615|CAN_YEAST Carbonic anhydrase OS=Saccharomyces cerevisi... 30 6.5 sp|O94255|CAN_SCHPO Carbonic anhydrase OS=Schizosaccharomyces po... 30 6.5 sp|P39671|PGM_AGRTU Phosphoglucomutase OS=Agrobacterium tumefaci... 29 8.5 sp|Q7MG94|MALT_VIBVY HTH-type transcriptional regulator malT OS=... 29 8.5 sp|Q8D4P3|MALT_VIBVU HTH-type transcriptional regulator malT OS=... 29 8.5
>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1 Length = 190
Score = 127 bits (319), Expect = 2e-29 Identities = 65/135 (48%), Positives = 85/135 (62%) Frame = +2
Query: 2 MVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIED 181 MVPPY S A +AIEYA IGHS CG IK LM I +DG+ S+FIE Sbjct: 48 MVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPA-SDFIEQ 106
Query: 182 WILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGG 361 W+ + A KVK+ + EF + CTKCEKE VN +L N L+YPFVR+ + + +L+L G Sbjct: 107 WVKLGLPAKSKVKANCNNLEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLSLKGA 166
Query: 362 YYDFVNNAFESWSVD 406 +YDFVN AF+ W++D Sbjct: 167 HYDFVNGAFDLWNLD 181
>sp|P42737|CAH2_ARATH Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2 Length = 259
Score = 124 bits (311), Expect = 2e-28 Identities = 63/134 (47%), Positives = 81/134 (60%) Frame = +2
Query: 2 MVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIED 181 MVPP+ + +AIEYA IGHS CG IK LM DG+N ++FIED Sbjct: 117 MVPPFDKVKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNS-TDFIED 175
Query: 182 WILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGG 361 W+ I A KV + +S+ F +QC +CE+E VN +L N L+YPFVRE + G L L GG Sbjct: 176 WVKICLPAKSKVLAESESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKGG 235
Query: 362 YYDFVNNAFESWSV 403 YYDFVN +FE W + Sbjct: 236 YYDFVNGSFELWEL 249
>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1 Length = 330
Score = 124 bits (311), Expect = 2e-28 Identities = 60/140 (42%), Positives = 81/140 (57%) Frame = +2
Query: 2 MVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIED 181 MVPP+ S +A+EYA IGHSRCG IK LM ++G + ++FIED Sbjct: 188 MVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHS-TDFIED 246
Query: 182 WILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGG 361 W+ + A KV + H +QC +CEKE VN +L N L+YPFVR+ + + L L GG Sbjct: 247 WVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGG 306
Query: 362 YYDFVNNAFESWSVDLASMS 421 +YDFVN FE W++D S Sbjct: 307 HYDFVNGTFELWALDFGLSS 326
>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1 Length = 329
Score = 123 bits (308), Expect = 4e-28 Identities = 60/140 (42%), Positives = 80/140 (57%) Frame = +2
Query: 2 MVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIED 181 MVPP+ S +A+EYA IGHSRCG IK LM ++G + ++FIED Sbjct: 187 MVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHS-TDFIED 245
Query: 182 WILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGG 361 W+ + A KV + H +QC CEKE VN +L N L+YPFVR+ + + L L GG Sbjct: 246 WVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGG 305
Query: 362 YYDFVNNAFESWSVDLASMS 421 +YDFVN FE W++D S Sbjct: 306 HYDFVNGTFELWALDFGLSS 325
>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1 Length = 330
Score = 123 bits (308), Expect = 4e-28 Identities = 60/140 (42%), Positives = 80/140 (57%) Frame = +2
Query: 2 MVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIED 181 MVPP+ S +A+EYA IGHSRCG IK LM ++G + ++FIED Sbjct: 188 MVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHS-TDFIED 246
Query: 182 WILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGG 361 W+ + A KV + H +QC CEKE VN +L N L+YPFVR+ + + L L GG Sbjct: 247 WVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGG 306
Query: 362 YYDFVNNAFESWSVDLASMS 421 +YDFVN FE W++D S Sbjct: 307 HYDFVNGTFELWALDFGLSS 326
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1 Length = 328
Score = 122 bits (307), Expect = 6e-28 Identities = 63/140 (45%), Positives = 80/140 (57%) Frame = +2
Query: 2 MVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIED 181 +VPPY + +AIEYA IGHS CG IK L+ DG+ ++FIE+ Sbjct: 186 LVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYS-TDFIEE 244
Query: 182 WILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGG 361 W+ I A KVK+ H A F E CT CEKE VN +L N L+YPFVRE + + L L GG Sbjct: 245 WVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGG 304
Query: 362 YYDFVNNAFESWSVDLASMS 421 YYDFV +FE W ++ S Sbjct: 305 YYDFVKGSFELWGLEFGLSS 324
>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2 Length = 330
Score = 122 bits (306), Expect = 7e-28 Identities = 60/140 (42%), Positives = 80/140 (57%) Frame = +2
Query: 2 MVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIED 181 MVPP+ S +A+EYA IGHSRCG IK LM ++G + ++FIED Sbjct: 188 MVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHS-TDFIED 246
Query: 182 WILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGG 361 W+ + A KV + H +QC CEKE VN +L N L+YPFVR+ + + L L GG Sbjct: 247 WVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLALKGG 306
Query: 362 YYDFVNNAFESWSVDLASMS 421 +YDFVN FE W++D S Sbjct: 307 HYDFVNGTFELWALDFGLSS 326
>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Length = 321
Score = 122 bits (306), Expect = 7e-28 Identities = 64/135 (47%), Positives = 76/135 (56%) Frame = +2
Query: 2 MVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIED 181 MVP Y S +AIEYA IGHS CG IK LM + DGS + FIED Sbjct: 179 MVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSES-TAFIED 237
Query: 182 WILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGG 361 W+ I A KV+ H F +QCT CEKE VN +L N L+YPFVRE + L L GG Sbjct: 238 WVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGG 297
Query: 362 YYDFVNNAFESWSVD 406 +YDFVN FE W ++ Sbjct: 298 HYDFVNGGFELWGLE 312
>sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1 Length = 324
Score = 122 bits (305), Expect = 1e-27 Identities = 63/132 (47%), Positives = 83/132 (62%) Frame = +2
Query: 2 MVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIED 181 MVP Y N + SAIEYA IGHSRCG IKAL+ ++ DG++ F+ED Sbjct: 192 MVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLK-DGADDSFHFVED 250
Query: 182 WILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGG 361 W+ I A KKV++ S F +QCT EKE VN +L N L+YPFV+E +++G L L GG Sbjct: 251 WVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGG 310
Query: 362 YYDFVNNAFESW 397 +YDFV+ FE+W Sbjct: 311 HYDFVSGKFETW 322
>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2 Length = 347
Score = 122 bits (305), Expect = 1e-27 Identities = 67/147 (45%), Positives = 84/147 (57%), Gaps = 2/147 (1%) Frame = +2
Query: 2 MVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSEFIED 181 MVPP+ +AIEYA IGHS CG IK LM DG+N ++FIED Sbjct: 194 MVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNS-TDFIED 252
Query: 182 WILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELTLHGG 361 W+ I A KV S + F +QC +CE+E VN +L N L+YPFVRE + G L L GG Sbjct: 253 WVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGG 312
Query: 362 YYDFVNNAFESWSVD--LASMSKVEKV 436 YYDFV AFE W ++ L+ S V+ V Sbjct: 313 YYDFVKGAFELWGLEFGLSETSSVKDV 339
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5NE21 |
Definition |
tr|Q5NE21|Q5NE21_SOLLC Carbonic anhydrase OS=Solanum lycopersicum |
Align length |
135 |
Score (bit) |
129.0 |
E-value |
7.0e-29 |
Report |
 |