BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916725|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_G11.
         (295 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P11533|DMD_CHICK Dystrophin OS=Gallus gallus GN=DMD PE=2 SV=1       30   2.9  
sp|P63188|GRPE_AGRTU Protein grpE OS=Agrobacterium tumefaciens G...    29   6.3  
sp|P63187|GRPE_AGRT5 Protein grpE OS=Agrobacterium tumefaciens (...    29   6.3  
sp|P75972|YMFI_ECOLI Uncharacterized protein ymfI OS=Escherichia...    29   6.5  
sp|Q9VJB6|CADN2_DROME Putative neural-cadherin 2 OS=Drosophila m...    29   6.5  
sp|Q1XDP9|YCF39_PORYE Uncharacterized protein ycf39 OS=Porphyra ...    29   8.5  

>sp|P11533|DMD_CHICK Dystrophin OS=Gallus gallus GN=DMD PE=2 SV=1
          Length = 3660

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 25/63 (39%), Positives = 30/63 (47%)
 Frame = +1

Query: 100  DCSGKLLLRVELIAAPEATTEKNILQSLLESEGCVLPSFWLVGNPSAHSGLFTTPTSAGR 279
            DC GK+ LRVE     E    K IL+ L E+ G  L S  L  NP     L +T   A R
Sbjct: 2251 DCLGKVKLRVE-----ELLPHKGILKRLNETGGTTLGSASL--NPERKHKLESTLKEASR 2303

Query: 280  KTL 288
            + L
Sbjct: 2304 RLL 2306


>sp|P63188|GRPE_AGRTU Protein grpE OS=Agrobacterium tumefaciens
           GN=grpE PE=3 SV=1
          Length = 211

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -3

Query: 290 DRVLRPAEVGVVKSPE*AEGFPTSQKEGSTHPSDSS 183
           DRVLRPA VGV      A+G P ++   S  P  SS
Sbjct: 176 DRVLRPAMVGV------AKGGPKAEPSASAEPGTSS 205


>sp|P63187|GRPE_AGRT5 Protein grpE OS=Agrobacterium tumefaciens
           (strain C58 / ATCC 33970) GN=grpE PE=3 SV=1
          Length = 211

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -3

Query: 290 DRVLRPAEVGVVKSPE*AEGFPTSQKEGSTHPSDSS 183
           DRVLRPA VGV      A+G P ++   S  P  SS
Sbjct: 176 DRVLRPAMVGV------AKGGPKAEPSASAEPGTSS 205


>sp|P75972|YMFI_ECOLI Uncharacterized protein ymfI OS=Escherichia
           coli (strain K12) GN=ymfI PE=4 SV=2
          Length = 113

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = +1

Query: 142 APEATTEKNILQSLLESEGCVLPSFWLVGNPSAHSGLFTTP 264
           A  A  + NI     E   C+LPS  LVGN   H  L   P
Sbjct: 68  ANSAGVDANIFVCKFEQSACLLPSASLVGNDFVHYDLTPKP 108


>sp|Q9VJB6|CADN2_DROME Putative neural-cadherin 2 OS=Drosophila
            melanogaster GN=CadN2 PE=2 SV=2
          Length = 2215

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +1

Query: 139  AAPEATTEKNILQSLLESEGCVLPSFWLVGNPSAHSGLFTTPTSA 273
            AA +A TE    Q L E  G ++  FW+  NP+    L T P  A
Sbjct: 2089 AALKAATEPTQPQKLAERGGNLIKDFWMPANPAIR--LLTLPNDA 2131


>sp|Q1XDP9|YCF39_PORYE Uncharacterized protein ycf39 OS=Porphyra
           yezoensis GN=ycf39 PE=3 SV=1
          Length = 319

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = +1

Query: 22  REFLTCLKLIDAN*TALPTSYKPPCTDCSGKLLLRVELIAAPEATTEKNILQSLLESE 195
           + F     +IDA+ + LP  Y     D  GK+ L   + AA  A  E+ I  S+L SE
Sbjct: 60  QSFCGVTAIIDASTSRLPDPYNAEKIDLDGKIAL---IEAAKAAKVERFIFFSILNSE 114

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916725|Adiantum capillus-veneris mRNA, clone:
YMU001_000090_G11.
         (295 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6EPR4|Q6EPR4_ORYSJ Os09g0284400 protein OS=Oryza sativa subs...    33   5.4  
tr|A2YZD8|A2YZD8_ORYSI Putative uncharacterized protein OS=Oryza...    33   5.4  
tr|A9T4B5|A9T4B5_PHYPA Predicted protein OS=Physcomitrella paten...    33   9.2  

>tr|Q6EPR4|Q6EPR4_ORYSJ Os09g0284400 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0009H03.28 PE=2 SV=1
          Length = 302

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = -3

Query: 293 HDRVLRPAEVGVVKSPE*AEGFPTSQKEGSTHPSDSS 183
           HDRVLRPAEVGV       EG PT+ +E + +    S
Sbjct: 269 HDRVLRPAEVGV------TEGGPTTTEEAAENSEQKS 299


>tr|A2YZD8|A2YZD8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_30714 PE=4 SV=1
          Length = 302

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = -3

Query: 293 HDRVLRPAEVGVVKSPE*AEGFPTSQKEGSTHPSDSS 183
           HDRVLRPAEVGV       EG PT+ +E + +    S
Sbjct: 269 HDRVLRPAEVGV------TEGGPTTTEEAAENSEQKS 299


>tr|A9T4B5|A9T4B5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_110204 PE=4 SV=1
          Length = 302

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = -3

Query: 293 HDRVLRPAEVGVVKSPE 243
           HDRV+RPAEVGV+K+ E
Sbjct: 286 HDRVIRPAEVGVIKAKE 302