BP916726 |
Clone id |
YMU001_000090_G12 |
Library |
YMU01 |
Length |
544 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000090_G12. |
Accession |
BP916726 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATGCCTGGCGGGTATGGGCAAATAAATTCACAGCAGACTCTATCACACGCAGCCTCTGAG TGAACCCTTTCTGAAGCCGCAAAGTATGCCTCCCTTGGAGCAAGCCTCCTGTTTCGCCAC TTGTCAGTGCAAAATACACTAGCAAGGGACCTTTCCCTCTTGTTTGCGTCTGAACACAAC CCCAACCGTCTACTCTTGGCAAGGACTTTGAATGCTGCAACCAGAGAGTCTACGTCCTCA AGTGTCGTCCCTAAGCTCACTGCAAAAGTAATGGATTGAAGCAAGGGGAGCTCCGCAATG ACCTGATGATCATGTCGAAGAATATCATCGGCTTCAAACCCAGATATACCTAATTCCCAC AAACCTAGAGTAATACGCAACGGATCCATGGCCTCCACACCTCTTAGGCCTCTATCTCGA AGTCCATTGAAGCTTAAAACCTTCAAACCCTCCACCTGCTCCAGCAATTCTCTCGCTTGC TTTGCAAGTCGAATAGCGTCAGTGAATGCAGCTGTGCCTTTTTCAGCTGCATGCTCTGTT GCGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9K9K5 |
Definition |
sp|Q9K9K5|SPEA_BACHD Arginine decarboxylase OS=Bacillus halodurans |
Align length |
180 |
Score (bit) |
85.9 |
E-value |
1.0e-16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TN98 |
Definition |
tr|A9TN98|A9TN98_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
175 |
Score (bit) |
119.0 |
E-value |
1.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916726|Adiantum capillus-veneris mRNA, clone: YMU001_000090_G12. (544 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TN98|A9TN98_PHYPA Predicted protein OS=Physcomitrella paten... 119 1e-25 tr|B1XKB2|B1XKB2_SYNP2 Orn/Lys/Arg decarboxylase OS=Synechococcu... 110 5e-23 tr|B8ANS6|B8ANS6_ORYSI Putative uncharacterized protein OS=Oryza... 110 6e-23 tr|B2J758|B2J758_NOSP7 Orn/Lys/Arg decarboxylase, major region O... 109 1e-22 tr|Q852C3|Q852C3_ORYSJ Putative decarboxylase OS=Oryza sativa su... 108 2e-22 tr|Q84SP7|Q84SP7_ORYSJ Os03g0848100 protein OS=Oryza sativa subs... 108 2e-22 tr|Q10AM0|Q10AM0_ORYSJ Ser/Thr protein phosphatase family protei... 108 2e-22 tr|A3APR1|A3APR1_ORYSJ Putative uncharacterized protein OS=Oryza... 108 2e-22 tr|B8HR26|B8HR26_9CHRO Orn/Lys/Arg decarboxylase major region OS... 106 7e-22 tr|B4W1R1|B4W1R1_9CYAN Orn/Lys/Arg decarboxylase, major domain, ... 105 2e-21 tr|Q8YMP6|Q8YMP6_ANASP Lysine decarboxylase OS=Anabaena sp. (str... 104 3e-21 tr|B7FJL6|B7FJL6_MEDTR Putative uncharacterized protein OS=Medic... 103 6e-21 tr|B6SYD8|B6SYD8_MAIZE Putative uncharacterized protein OS=Zea m... 103 6e-21 tr|Q4BXH6|Q4BXH6_CROWT Orn/Lys/Arg decarboxylase, major region:O... 102 1e-20 tr|A3IM84|A3IM84_9CHRO Lysine decarboxylase OS=Cyanothece sp. CC... 102 1e-20 tr|B6SWX1|B6SWX1_MAIZE Putative uncharacterized protein OS=Zea m... 101 3e-20 tr|Q3MB59|Q3MB59_ANAVT Arginine decarboxylase OS=Anabaena variab... 100 4e-20 tr|B7K2G0|B7K2G0_SYNP8 Orn/Lys/Arg decarboxylase major region OS... 99 1e-19 tr|B4C3E3|B4C3E3_9CHRO Orn/Lys/Arg decarboxylase major region OS... 99 1e-19 tr|B0JU80|B0JU80_MICAN Lysine decarboxylase OS=Microcystis aerug... 98 2e-19 tr|B7KFA8|B7KFA8_9CHRO Orn/Lys/Arg decarboxylase major region OS... 98 3e-19 tr|B4B242|B4B242_9CHRO Orn/Lys/Arg decarboxylase major region OS... 97 4e-19 tr|B1WTQ0|B1WTQ0_CYAA5 Lysine decarboxylase OS=Cyanothece (strai... 96 9e-19 tr|A8YFR6|A8YFR6_MICAE Cad protein OS=Microcystis aeruginosa PCC... 96 2e-18 tr|Q2JP26|Q2JP26_SYNJB Orn/Lys/Arg decarboxylase OS=Synechococcu... 94 6e-18 tr|A0ZFP4|A0ZFP4_NODSP Orn/Lys/Arg decarboxylase OS=Nodularia sp... 92 2e-17 tr|A0YN82|A0YN82_9CYAN Lysine decarboxylase OS=Lyngbya sp. PCC 8... 91 3e-17 tr|Q18A82|Q18A82_CLOD6 Arginine decarboxylase OS=Clostridium dif... 91 5e-17 tr|B5VZE2|B5VZE2_SPIMA Orn/Lys/Arg decarboxylase major region OS... 86 1e-15 tr|Q2JVN4|Q2JVN4_SYNJA Orn/Lys/Arg decarboxylase OS=Synechococcu... 84 4e-15
>tr|A9TN98|A9TN98_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_148099 PE=4 SV=1 Length = 590
Score = 119 bits (298), Expect = 1e-25 Identities = 69/175 (39%), Positives = 103/175 (58%), Gaps = 10/175 (5%) Frame = -3
Query: 497 AIRLAKQARELLEQVEGLKVLSFNGLRDRGLR--GVEAMDPLRITLGLWELGISGFEADD 324 A+ LA R L+Q+ GL +L + + + DPLRIT+GLW LG++GFEADD Sbjct: 380 ALSLAFMVRNALQQLPGLMILDLASMPSDAVAESSIAGTDPLRITVGLWGLGLTGFEADD 439
Query: 323 ILRHDHQVIAELPLLQSITFAVSLGTTLEDVDSLVAAFKVLAK------SRRLGLCSDAN 162 ILR + VIAELP L+SITFAVS+G++ D L+ +F L+ + +G S+ Sbjct: 440 ILRFEFGVIAELPSLRSITFAVSVGSSHRDATRLIDSFTALSSRYACRTDQIVGPISNPL 499
Query: 161 KRERSLASVFCTDKWRNR--RLAPREAYFAASERVHSEAACDRVCCEFICPYPPG 3 +++++ W N+ L+PREA+++ SE + E A RV + +CPYPPG Sbjct: 500 LQDQAIV-------WENQLMYLSPREAFYSKSEEIMVECALGRVSADLLCPYPPG 547
>tr|B1XKB2|B1XKB2_SYNP2 Orn/Lys/Arg decarboxylase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=SYNPCC7002_A1159 PE=4 SV=1 Length = 481
Score = 110 bits (275), Expect = 5e-23 Identities = 64/184 (34%), Positives = 106/184 (57%), Gaps = 4/184 (2%) Frame = -3
Query: 542 ATEHAAEKGTAAFTDAIRLAKQARELLEQVEGLKVLSFNGLRDRGLRGVEAMDPLRITLG 363 A A +G +++ + LA++AR+ L + GLK+ + G+E DP R+T+ Sbjct: 268 ARAQMAAQGETLWSETLALAQRARQALTSIPGLKIFD-----PQPQAGIEYFDPTRLTVD 322
Query: 362 LWELGISGFEADDILRHDHQVIAELPLLQSITFAVSLGTTLEDVDSLVAAFKVLAKSRRL 183 + LG++G+ AD+IL VIAELPL +S+TF ++ G T +D+ L+ AF+ L+++ + Sbjct: 323 VSGLGLTGYAADEILTETLDVIAELPLGRSLTFILTFGNTNQDIQRLIDAFQTLSQNNQA 382
Query: 182 GLCSDANKRERSLASVFCTDKWRN----RRLAPREAYFAASERVHSEAACDRVCCEFICP 15 NK S TD+ + +L+PR+A+FA S + EA+ +++C E ICP Sbjct: 383 Q--QPLNKPNIS------TDQPKTCYGLPQLSPRQAFFATSRAITLEASLNQICAELICP 434
Query: 14 YPPG 3 YPPG Sbjct: 435 YPPG 438
>tr|B8ANS6|B8ANS6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14320 PE=4 SV=1 Length = 579
Score = 110 bits (274), Expect = 6e-23 Identities = 65/180 (36%), Positives = 101/180 (56%) Frame = -3
Query: 542 ATEHAAEKGTAAFTDAIRLAKQARELLEQVEGLKVLSFNGLRDRGLRGVEAMDPLRITLG 363 AT + +F + + +A + + L + G+ VL + L A+DPLRITL Sbjct: 338 ATRAQLSENAESFDEPVSMALETKHQLRIIPGISVLDLSSF----LSDFPAIDPLRITLS 393
Query: 362 LWELGISGFEADDILRHDHQVIAELPLLQSITFAVSLGTTLEDVDSLVAAFKVLAKSRRL 183 +L +SG+EADD L +HQ+++EL Q++TFAV+LGT DV LV + K L++ + Sbjct: 394 ASDLQLSGYEADDFLAEEHQIVSELVGTQAVTFAVNLGTRRHDVQRLVHSVKHLSE-KYF 452
Query: 182 GLCSDANKRERSLASVFCTDKWRNRRLAPREAYFAASERVHSEAACDRVCCEFICPYPPG 3 ++++E +S DK+ + +L PREA+F RV E + +C E ICPYPPG Sbjct: 453 SENGSSSRKENPASSPL--DKF-SIKLTPREAFFLKKRRVSIEDSLGEICGELICPYPPG 509
>tr|B2J758|B2J758_NOSP7 Orn/Lys/Arg decarboxylase, major region OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_F0489 PE=4 SV=1 Length = 504
Score = 109 bits (272), Expect = 1e-22 Identities = 69/187 (36%), Positives = 95/187 (50%), Gaps = 15/187 (8%) Frame = -3
Query: 518 GTAAFTDAIRLAKQARELLEQVEGLKVL---------------SFNGLRDRGLRGVEAMD 384 G + ++LA +AR ++ Q+ GL VL S GL G G A+D Sbjct: 281 GKMLMSRTLQLANEARTIISQIPGLSVLQILSPPYQGGLGGSSSLGGLV--GSPGFVALD 338
Query: 383 PLRITLGLWELGISGFEADDILRHDHQVIAELPLLQSITFAVSLGTTLEDVDSLVAAFKV 204 R+T+ + LG++GFEAD+IL V AE LQ +TF +SLG T D+ LV F + Sbjct: 339 KTRLTVTVSGLGLTGFEADEILDEKFAVTAEFASLQHLTFIISLGNTPADIKQLVQGFTI 398
Query: 203 LAKSRRLGLCSDANKRERSLASVFCTDKWRNRRLAPREAYFAASERVHSEAACDRVCCEF 24 LAK R + N ++L T + +PREA+FA SE + DR+C E Sbjct: 399 LAKEYRATNLNVTNPNLQNL----LTTQGHTLHFSPREAFFALSETLPLAQTSDRICAEI 454
Query: 23 ICPYPPG 3 ICPYPPG Sbjct: 455 ICPYPPG 461
>tr|Q852C3|Q852C3_ORYSJ Putative decarboxylase OS=Oryza sativa subsp. japonica GN=OSJNBb0096M04.135 PE=4 SV=1 Length = 546
Score = 108 bits (269), Expect = 2e-22 Identities = 63/169 (37%), Positives = 98/169 (57%) Frame = -3
Query: 509 AFTDAIRLAKQARELLEQVEGLKVLSFNGLRDRGLRGVEAMDPLRITLGLWELGISGFEA 330 +F + + +A + + L + G+ VL + L A+DPLRITL +L +SG+EA Sbjct: 316 SFDEPVSMALETKHQLRIIPGISVLDLSSF----LSDFPAIDPLRITLSASDLQLSGYEA 371
Query: 329 DDILRHDHQVIAELPLLQSITFAVSLGTTLEDVDSLVAAFKVLAKSRRLGLCSDANKRER 150 DD L +HQ+++EL Q++TFAV+LGT DV LV + K L++ + ++++E Sbjct: 372 DDFLAEEHQIVSELVGTQAVTFAVNLGTRRHDVQRLVHSVKHLSE-KYFSENGSSSRKEN 430
Query: 149 SLASVFCTDKWRNRRLAPREAYFAASERVHSEAACDRVCCEFICPYPPG 3 +S DK+ + +L PREA+F RV E + +C E ICPYPPG Sbjct: 431 PASSPL--DKF-SIKLTPREAFFLKKRRVSIEDSLGEICGELICPYPPG 476
>tr|Q84SP7|Q84SP7_ORYSJ Os03g0848100 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0043P23.3 PE=2 SV=1 Length = 520
Score = 108 bits (269), Expect = 2e-22 Identities = 63/169 (37%), Positives = 98/169 (57%) Frame = -3
Query: 509 AFTDAIRLAKQARELLEQVEGLKVLSFNGLRDRGLRGVEAMDPLRITLGLWELGISGFEA 330 +F + + +A + + L + G+ VL + L A+DPLRITL +L +SG+EA Sbjct: 316 SFDEPVSMALETKHQLRIIPGISVLDLSSF----LSDFPAIDPLRITLSASDLQLSGYEA 371
Query: 329 DDILRHDHQVIAELPLLQSITFAVSLGTTLEDVDSLVAAFKVLAKSRRLGLCSDANKRER 150 DD L +HQ+++EL Q++TFAV+LGT DV LV + K L++ + ++++E Sbjct: 372 DDFLAEEHQIVSELVGTQAVTFAVNLGTRRHDVQRLVHSVKHLSE-KYFSENGSSSRKEN 430
Query: 149 SLASVFCTDKWRNRRLAPREAYFAASERVHSEAACDRVCCEFICPYPPG 3 +S DK+ + +L PREA+F RV E + +C E ICPYPPG Sbjct: 431 PASSPL--DKF-SIKLTPREAFFLKKRRVSIEDSLGEICGELICPYPPG 476
>tr|Q10AM0|Q10AM0_ORYSJ Ser/Thr protein phosphatase family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g63074 PE=4 SV=1 Length = 1100
Score = 108 bits (269), Expect = 2e-22 Identities = 63/169 (37%), Positives = 98/169 (57%) Frame = -3
Query: 509 AFTDAIRLAKQARELLEQVEGLKVLSFNGLRDRGLRGVEAMDPLRITLGLWELGISGFEA 330 +F + + +A + + L + G+ VL + L A+DPLRITL +L +SG+EA Sbjct: 896 SFDEPVSMALETKHQLRIIPGISVLDLSSF----LSDFPAIDPLRITLSASDLQLSGYEA 951
Query: 329 DDILRHDHQVIAELPLLQSITFAVSLGTTLEDVDSLVAAFKVLAKSRRLGLCSDANKRER 150 DD L +HQ+++EL Q++TFAV+LGT DV LV + K L++ + ++++E Sbjct: 952 DDFLAEEHQIVSELVGTQAVTFAVNLGTRRHDVQRLVHSVKHLSE-KYFSENGSSSRKEN 1010
Query: 149 SLASVFCTDKWRNRRLAPREAYFAASERVHSEAACDRVCCEFICPYPPG 3 +S DK+ + +L PREA+F RV E + +C E ICPYPPG Sbjct: 1011 PASSPL--DKF-SIKLTPREAFFLKKRRVSIEDSLGEICGELICPYPPG 1056
>tr|A3APR1|A3APR1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_012783 PE=4 SV=1 Length = 535
Score = 108 bits (269), Expect = 2e-22 Identities = 63/169 (37%), Positives = 98/169 (57%) Frame = -3
Query: 509 AFTDAIRLAKQARELLEQVEGLKVLSFNGLRDRGLRGVEAMDPLRITLGLWELGISGFEA 330 +F + + +A + + L + G+ VL + L A+DPLRITL +L +SG+EA Sbjct: 305 SFDEPVSMALETKHQLRIIPGISVLDLSSF----LSDFPAIDPLRITLSASDLQLSGYEA 360
Query: 329 DDILRHDHQVIAELPLLQSITFAVSLGTTLEDVDSLVAAFKVLAKSRRLGLCSDANKRER 150 DD L +HQ+++EL Q++TFAV+LGT DV LV + K L++ + ++++E Sbjct: 361 DDFLAEEHQIVSELVGTQAVTFAVNLGTRRHDVQRLVHSVKHLSE-KYFSENGSSSRKEN 419
Query: 149 SLASVFCTDKWRNRRLAPREAYFAASERVHSEAACDRVCCEFICPYPPG 3 +S DK+ + +L PREA+F RV E + +C E ICPYPPG Sbjct: 420 PASSPL--DKF-SIKLTPREAFFLKKRRVSIEDSLGEICGELICPYPPG 465
>tr|B8HR26|B8HR26_9CHRO Orn/Lys/Arg decarboxylase major region OS=Cyanothece sp. PCC 7425 GN=Cyan7425_5242 PE=4 SV=1 Length = 486
Score = 106 bits (265), Expect = 7e-22 Identities = 65/180 (36%), Positives = 96/180 (53%) Frame = -3
Query: 542 ATEHAAEKGTAAFTDAIRLAKQARELLEQVEGLKVLSFNGLRDRGLRGVEAMDPLRITLG 363 A + A +G T+ + LA QARE ++ + L+VL L++ G A+DP R+ + Sbjct: 273 ARQQMALQGEVILTETLHLATQAREQIKAIPLLQVLGTEHLQEDGFA---AIDPTRLRIS 329
Query: 362 LWELGISGFEADDILRHDHQVIAELPLLQSITFAVSLGTTLEDVDSLVAAFKVLAKSRRL 183 + LG SGFE D+ L H V AE P L ++TF +SLG T D+D LV +A+ Sbjct: 330 VAPLGRSGFEVDEQL-DQHGVTAEFPSLSALTFIISLGNTAADIDRLVNGLSQIAED--- 385
Query: 182 GLCSDANKRERSLASVFCTDKWRNRRLAPREAYFAASERVHSEAACDRVCCEFICPYPPG 3 S +R + + + L+PREA+FA+ E V + A DR+ E +CPYPPG Sbjct: 386 ---SLPRSNDRPMMAFPFPELIATPSLSPREAFFASHETVPFDRAVDRISAELVCPYPPG 442
>tr|B4W1R1|B4W1R1_9CYAN Orn/Lys/Arg decarboxylase, major domain, putative OS=Microcoleus chthonoplastes PCC 7420 GN=MC7420_6911 PE=4 SV=1 Length = 493
Score = 105 bits (261), Expect = 2e-21 Identities = 65/174 (37%), Positives = 93/174 (53%), Gaps = 2/174 (1%) Frame = -3
Query: 518 GTAAFTDAIRLAKQARELLEQVEGLKVLSFNGLRDRGLRGVEAMDPLRITLGLWELGISG 339 G + +RLA+ ARE ++Q+ GL VL G +DP R+T+ + ELG+SG Sbjct: 284 GEKLLSRTLRLAEAAREQIQQIPGLSVLDATNTP-----GCFTLDPTRLTVRVTELGLSG 338
Query: 338 FEADDILRHDHQVIAELPLLQSITFAVSLGTTLEDVDSLVAAFKVLAK--SRRLGLCSDA 165 FEAD+I VI ELP Q +TF +SLG T D+ LV AF L + SR DA Sbjct: 339 FEADEIFCEQLGVIGELPTFQHLTFILSLGNTAADIQQLVQAFTDLQQRYSR-----PDA 393
Query: 164 NKRERSLASVFCTDKWRNRRLAPREAYFAASERVHSEAACDRVCCEFICPYPPG 3 + R+ + ++PR+A+FA ER+ + + + E+ICPYPPG Sbjct: 394 SFRQNLCQLGMTSGLILEPSMSPRDAFFAPKERLTLDQSVGHISAEWICPYPPG 447
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