BP916733 |
Clone id |
YMU001_000090_H08 |
Library |
YMU01 |
Length |
520 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000090_H08. |
Accession |
BP916733 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CAGAAACTCAATTCGGGCTTGCAGAGTCATTTCTTACTGTTCAACTGCCAGTTATGCTAC GCCCTTCACCACCTCGCTTTCTCAATCTTCTAGACAAAGCACTTGTTGGTGTGGTTTTGC AGAATCAAACCAATCATTCTCTTCCTCTTTTGGTGGGTATGAAAAAGAATAATTCAAAGG TTGAGGCTGAGAGTGTTGGGTATTCTCTGACTCTTCCTAGCTCTCGACGACTAGTTGTTC TTTTCCCTATAATGGCTGTGGATGTGGGTAAGGTGCATCTCCAGGTTGTGGTGAGTACAC TAGCAGAAGAGAATGTACCATCTTTCTCTGATGCAAGTGAAATTATAATACCCATCATTG CTCCAGTCTCTTCAGAACACTTCGCCACCTTTGGCGACATGGCTGAGGAAGAAGTTGTTT TGCAGCCTATTCAAAGCCCATTGCATGCCTTTCCTAAATATGGGGGATTGAATATTTCCA TTTCTTCGACAACATTACAGTCATTGACTGATGCCCTCCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q87E11 |
Definition |
sp|Q87E11|Y518_XYLFT UPF0192 protein PD_0518 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) |
Align length |
91 |
Score (bit) |
35.4 |
E-value |
0.16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q54BW4 |
Definition |
tr|Q54BW4|Q54BW4_DICDI Ras GTPase domain-containing protein OS=Dictyostelium discoideum |
Align length |
161 |
Score (bit) |
69.7 |
E-value |
8.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916733|Adiantum capillus-veneris mRNA, clone: YMU001_000090_H08. (520 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q54BW4|Q54BW4_DICDI Ras GTPase domain-containing protein OS=D... 70 8e-11 tr|Q55DZ2|Q55DZ2_DICDI Ubiquitin domain-containing protein OS=Di... 56 1e-06 tr|Q88QC4|Q88QC4_PSEPK Extracellular protein, putative OS=Pseudo... 45 0.002 tr|Q7N712|Q7N712_PHOLL Similar to hypothetical lipoprotein YfhM ... 45 0.002 tr|A5VY17|A5VY17_PSEP1 Alpha-2-macroglobulin domain protein OS=P... 45 0.002 tr|A1JKR4|A1JKR4_YERE8 Putative membrane protein OS=Yersinia ent... 44 0.006 tr|B0KLC2|B0KLC2_PSEPG Alpha-2-macroglobulin domain protein OS=P... 43 0.008 tr|B4CTN9|B4CTN9_9BACT Alpha-2-macroglobulin domain protein OS=C... 43 0.011 tr|B2Q0X4|B2Q0X4_PROST Putative uncharacterized protein OS=Provi... 42 0.018 tr|A9F3D4|A9F3D4_SORC5 Putative uncharacterized protein OS=Soran... 42 0.024 tr|B1JF88|B1JF88_PSEPW Alpha-2-macroglobulin domain protein OS=P... 41 0.031 tr|Q2JT89|Q2JT89_SYNJA Alpha-2-macroglobulin family protein OS=S... 41 0.041 tr|Q21N63|Q21N63_SACD2 Alpha-2-macroglobulin-like protein OS=Sac... 41 0.041 tr|Q4ZN57|Q4ZN57_PSEU2 Alpha-2-macroglobulin, N-terminal:Alpha-2... 39 0.12 tr|Q87VU0|Q87VU0_PSESM Lipoprotein, putative OS=Pseudomonas syri... 39 0.15 tr|Q1I4D9|Q1I4D9_PSEE4 Putative uncharacterized protein OS=Pseud... 38 0.26 tr|B2KC66|B2KC66_ELUMP Alpha-2-macroglobulin domain protein OS=E... 38 0.26 tr|B6X4T1|B6X4T1_9ENTR Putative uncharacterized protein OS=Provi... 38 0.26 tr|A7NMB5|A7NMB5_ROSCS Alpha-2-macroglobulin domain protein OS=R... 37 0.45 tr|B6FF81|B6FF81_9ENTR Putative uncharacterized protein OS=Enter... 37 0.45 tr|Q47J33|Q47J33_DECAR Alpha-2-macroglobulin, N-terminal:Alpha-2... 37 0.59 tr|A4XQ82|A4XQ82_PSEMY Alpha-2-macroglobulin domain protein OS=P... 37 0.59 tr|A1ZE26|A1ZE26_9SPHI Alpha-2-macroglobulin family N-terminal r... 37 0.59 tr|B1ZE72|B1ZE72_METPB Alpha-2-macroglobulin domain protein OS=M... 37 0.77 tr|A7NIT9|A7NIT9_ROSCS Alpha-2-macroglobulin domain protein OS=R... 37 0.77 tr|A8SYF1|A8SYF1_9FIRM Putative uncharacterized protein OS=Copro... 36 1.00 tr|A5UVB7|A5UVB7_ROSS1 Alpha-2-macroglobulin domain protein OS=R... 36 1.0 tr|B6ATT1|B6ATT1_9RHOB Alpha-2-macroglobulin N-terminal domain f... 36 1.0 tr|A4TU55|A4TU55_9PROT Alpha-2-macroglobulin, N-terminal:N/apple... 36 1.3 tr|A3X6K1|A3X6K1_9RHOB PAN domain protein OS=Roseobacter sp. MED... 36 1.3
>tr|Q54BW4|Q54BW4_DICDI Ras GTPase domain-containing protein OS=Dictyostelium discoideum GN=DDB_0231848 PE=4 SV=1 Length = 3933
Score = 69.7 bits (169), Expect = 8e-11 Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 5/161 (3%) Frame = +3
Query: 3 ETQFGLAESFLTVQLPVMLRPSPPRFLNLLDKALVGVVLQNQTNHSLPLLVGMKKNNSKV 182 E +FG ES +T ++ V R PPRFLN+ D +G+V+ N +N++ + +G+K + Sbjct: 3203 EQKFGKGESLITSKVLVSTRCVPPRFLNINDSCTIGIVVSNNSNNNRMVKIGVKCSEHLT 3262
Query: 183 EAESVGYSL-----TLPSSRRLVVLFPIMAVDVGKVHLQVVVSTLAEENVPSFSDASEII 347 S G S + +R ++ + ++ G +Q+ + + DA ++ Sbjct: 3263 ILNSNGTSTFGHFSFVEQKKRKIIYINVKTLNTGVGSIQISCVS------GKYGDAMQVS 3316
Query: 348 IPIIAPVSSEHFATFGDMAEEEVVLQPIQSPLHAFPKYGGL 470 IPI P ++ + +G + + V+QPI+ P + P +G L Sbjct: 3317 IPIFNPPTTRTTSVYGVIDDGAGVIQPIEMPQDSLPIFGSL 3357
>tr|Q55DZ2|Q55DZ2_DICDI Ubiquitin domain-containing protein OS=Dictyostelium discoideum GN=DDB_0190282 PE=4 SV=2 Length = 2337
Score = 55.8 bits (133), Expect = 1e-06 Identities = 30/81 (37%), Positives = 47/81 (58%) Frame = +3
Query: 9 QFGLAESFLTVQLPVMLRPSPPRFLNLLDKALVGVVLQNQTNHSLPLLVGMKKNNSKVEA 188 QFG E LP+M+RPSPPRFLN DKA+ +++ + + L ++ NN +E Sbjct: 1660 QFGSCEHTFISSLPIMVRPSPPRFLNHNDKAIFPIMISSIVDCDLFFSGAIRSNNCNIET 1719
Query: 189 ESVGYSLTLPSSRRLVVLFPI 251 + G+S LP+ R ++FP+ Sbjct: 1720 K--GFSGVLPAKSR--IIFPV 1736
>tr|Q88QC4|Q88QC4_PSEPK Extracellular protein, putative OS=Pseudomonas putida (strain KT2440) GN=PP0570 PE=4 SV=1 Length = 1633
Score = 45.4 bits (106), Expect = 0.002 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 3/130 (2%) Frame = +3
Query: 3 ETQFGLAESFLTVQLPVMLRPSPPRFLNLLDKALVGVVLQNQTNHSLPLLVGMKKNNSKV 182 E FG+AE V P++ S PRFL D+ + + L N + + L V + + Sbjct: 985 EEHFGMAEGKTVVAAPLIAELSAPRFLAGGDRTSLALDLANLSGRAQQLSVEITTDGQLS 1044
Query: 183 EAESVGYSLTLPSSRRLVVLFPIMA---VDVGKVHLQVVVSTLAEENVPSFSDASEIIIP 353 A + S+ L +R ++ P+ A + GKVH++V L E V +F + + Sbjct: 1045 LAANAVQSVNLAEGQRSTLMIPVQAQGGLGQGKVHVRVTGLQLPNEPVNAFEREWTLGVR 1104
Query: 354 IIAPVSSEHF 383 P +H+ Sbjct: 1105 PAYPAMLKHY 1114
>tr|Q7N712|Q7N712_PHOLL Similar to hypothetical lipoprotein YfhM of Escherichia coli OS=Photorhabdus luminescens subsp. laumondii GN=plu1370 PE=4 SV=1 Length = 1676
Score = 45.4 bits (106), Expect = 0.002 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 3/139 (2%) Frame = +3
Query: 3 ETQFGLAESFLTVQLPVMLRPSPPRFLNLLDKALVGVVLQNQTNHSLPLLVGMKKNNSKV 182 E +FG E+ + V PV+ + + PRF+ D AL+ + L N T + L + N+ Sbjct: 1028 EDEFGHGENKVVVAAPVVAQMALPRFMAGGDSALLSLDLTNLTEQTQNLTLNFAANDLIK 1087
Query: 183 EAESVGYSLTLPSSRRLVVLFPIMA---VDVGKVHLQVVVSTLAEENVPSFSDASEIIIP 353 V +TL +R V P+ A G+V L V L EN+ + ++ +I + Sbjct: 1088 LEGDVSKEITLEKGKRTTVEIPVTADLGFGQGEVSLTVDGLNLPGENLKPYKNSWQIGVR 1147
Query: 354 IIAPVSSEHFATFGDMAEE 410 P + FA EE Sbjct: 1148 PAQPAETVLFANVIHPGEE 1166
>tr|A5VY17|A5VY17_PSEP1 Alpha-2-macroglobulin domain protein OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=Pput_0609 PE=3 SV=1 Length = 1633
Score = 45.4 bits (106), Expect = 0.002 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 3/130 (2%) Frame = +3
Query: 3 ETQFGLAESFLTVQLPVMLRPSPPRFLNLLDKALVGVVLQNQTNHSLPLLVGMKKNNSKV 182 E FG+AE V P++ S PRFL D+ + + L N + + L V + + Sbjct: 985 EEHFGMAEGKTVVAAPLIAELSAPRFLAGGDRTSLALDLANLSGRAQQLSVEITTDGQLS 1044
Query: 183 EAESVGYSLTLPSSRRLVVLFPIMA---VDVGKVHLQVVVSTLAEENVPSFSDASEIIIP 353 A + S+ L +R ++ P+ A + GKVH++V L E V +F + + Sbjct: 1045 LAANAVQSVNLAEGQRSTLMIPVQAQGGLGQGKVHVRVTGLQLPNEPVNAFEREWTLGVR 1104
Query: 354 IIAPVSSEHF 383 P +H+ Sbjct: 1105 PAYPAMLKHY 1114
>tr|A1JKR4|A1JKR4_YERE8 Putative membrane protein OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=YE1066 PE=4 SV=1 Length = 1678
Score = 43.5 bits (101), Expect = 0.006 Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 3/131 (2%) Frame = +3
Query: 3 ETQFGLAESFLTVQLPVMLRPSPPRFLNLLDKALVGVVLQNQTNHSLPLLVGMKKNNSKV 182 + FG AES + V P++ + + PRFL D + + L N + L + ++ Sbjct: 1023 DEDFGKAESKVVVAAPLIAQLATPRFLAGGDSTQLALDLSNLSGQPQTLSLNWAASDLLA 1082
Query: 183 EAESVGYSLTLPSSRRLVVLFPIMAVD---VGKVHLQVVVSTLAEENVPSFSDASEIIIP 353 + +L+L + R VL P+ A++ G + L + L E +P++ +I + Sbjct: 1083 LNGASTQTLSLANGERKTVLIPVRALNGFGQGDIGLTITGMVLPNEKLPNYQHHWKIGVR 1142
Query: 354 IIAPVSSEHFA 386 P + HFA Sbjct: 1143 PAYPAQTRHFA 1153
>tr|B0KLC2|B0KLC2_PSEPG Alpha-2-macroglobulin domain protein OS=Pseudomonas putida (strain GB-1) GN=PputGB1_0615 PE=3 SV=1 Length = 1632
Score = 43.1 bits (100), Expect = 0.008 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 3/130 (2%) Frame = +3
Query: 3 ETQFGLAESFLTVQLPVMLRPSPPRFLNLLDKALVGVVLQNQTNHSLPLLVGMKKNNSKV 182 E FG+AE V P++ S PRFL D+ + + L N + + L V + + Sbjct: 984 EEHFGMAEGKTVVAAPLIAELSAPRFLAGGDRTSLALDLANLSGRAQQLNVEITIDGQLS 1043
Query: 183 EAESVGYSLTLPSSRRLVVLFPIMA---VDVGKVHLQVVVSTLAEENVPSFSDASEIIIP 353 A + S+ L +R ++ P+ A + GKVH++V L E +F + + Sbjct: 1044 LAANAVQSVNLTEGQRSTLMIPVQAQGGLGQGKVHVRVTGLQLPNEPATAFEREWTLGVR 1103
Query: 354 IIAPVSSEHF 383 P +H+ Sbjct: 1104 PAYPAMLKHY 1113
>tr|B4CTN9|B4CTN9_9BACT Alpha-2-macroglobulin domain protein OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_0060 PE=4 SV=1 Length = 1538
Score = 42.7 bits (99), Expect = 0.011 Identities = 37/144 (25%), Positives = 63/144 (43%) Frame = +3
Query: 9 QFGLAESFLTVQLPVMLRPSPPRFLNLLDKALVGVVLQNQTNHSLPLLVGMKKNNSKVEA 188 QFG A+S V P+ML P+ PRF N+ D L+ VL N T + + V ++ + + V + Sbjct: 1226 QFGSADSSFEVNKPMMLEPALPRFANVGDTILLRGVLHNLTETAGEVDVRVELDRT-VSS 1284
Query: 189 ESVGYSLTLPSSRRLVVLFPIMAVDVGKVHLQVVVSTLAEENVPSFSDASEIIIPIIAPV 368 S + LP+ + V P+ G+ Q + + + DA + + + PV Sbjct: 1285 SSEKRHVQLPAHGSVAVDIPVTFTQAGRAVWQWTAAFTGDG--MKYQDAVQTTLQVGYPV 1342
Query: 369 SSEHFATFGDMAEEEVVLQPIQSP 440 + ++ E L SP Sbjct: 1343 PLKREMRLAELRGNEANLLANVSP 1366
>tr|B2Q0X4|B2Q0X4_PROST Putative uncharacterized protein OS=Providencia stuartii ATCC 25827 GN=PROSTU_03247 PE=4 SV=1 Length = 1682
Score = 42.0 bits (97), Expect = 0.018 Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 3/139 (2%) Frame = +3
Query: 3 ETQFGLAESFLTVQLPVMLRPSPPRFLNLLDKALVGVVLQNQTNHSLPLLVGMKKNNSKV 182 E FG A+S + V P++ + S PRF+ DK+ + L N T+++ + V K + Sbjct: 1034 EKDFGHADSKVVVAAPLITQMSMPRFMAGGDKSYFSLDLTNTTDNTQNVTVTFKASGMVK 1093
Query: 183 EAESVGYSLTLPSSRRLVVLFPIMA---VDVGKVHLQVVVSTLAEENVPSFSDASEIIIP 353 + L L +R V P+ A G+V + + L +E++ ++S++ ++ + Sbjct: 1094 LEGAATKELALVKGKRTTVTLPVRADYGYGQGEVSMTINGIDLPDESLKAYSNSWKVGVR 1153
Query: 354 IIAPVSSEHFATFGDMAEE 410 P + +A + E+ Sbjct: 1154 PAQPAETVSYAVAIEPGEQ 1172
>tr|A9F3D4|A9F3D4_SORC5 Putative uncharacterized protein OS=Sorangium cellulosum (strain So ce56) GN=sce4409 PE=4 SV=1 Length = 1922
Score = 41.6 bits (96), Expect = 0.024 Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 9/141 (6%) Frame = +3
Query: 3 ETQFGLAESFLTVQLPVMLRPSPPRFLNLLDKALVGVVLQNQTNHSLPLLVGMKKNNSKV 182 + +FG ES +T P+M RP+ PRFL D GVV+ ++ G+ K + V Sbjct: 1231 DDRFGYGESRVTTSRPLMARPALPRFLRAGDAIDAGVVVTSK---------GLAK-PATV 1280
Query: 183 EAESVGYSLTLP-SSRRLVVLFPIMAVDVGKVHLQVVVS-TLAEENVPSF-------SDA 335 E E LTL S++R + L P G ++ +S T A F SD Sbjct: 1281 EVEVTASGLTLAGSAKRAIELAP-----GGSAEVRFALSATRAGPATLRFRATGGGASDV 1335
Query: 336 SEIIIPIIAPVSSEHFATFGD 398 E+ I AP++ E A +GD Sbjct: 1336 VEVNREIKAPMAPEAVALYGD 1356
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