BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916739|Adiantum capillus-veneris mRNA, clone:
YMU001_000091_A05.
         (376 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P97868|RBBP6_MOUSE Retinoblastoma-binding protein 6 OS=Mus mu...    30   3.7  
sp|Q7Z6E9|RBBP6_HUMAN Retinoblastoma-binding protein 6 OS=Homo s...    30   3.7  
sp|P42087|HUTM_BACSU Putative histidine permease OS=Bacillus sub...    30   3.7  
sp|P0ACY3|YEAG_ECOLI Uncharacterized protein yeaG OS=Escherichia...    29   6.3  
sp|P0ACY4|YEAG_ECOL6 Uncharacterized protein yeaG OS=Escherichia...    29   6.3  
sp|P0ACY5|YEAG_ECO57 Uncharacterized protein yeaG OS=Escherichia...    29   6.3  
sp|Q96RW7|HMCN1_HUMAN Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1...    29   6.3  
sp|O00097|ADH1_PICST Alcohol dehydrogenase 1 OS=Pichia stipitis ...    29   8.3  

>sp|P97868|RBBP6_MOUSE Retinoblastoma-binding protein 6 OS=Mus
           musculus GN=Rbbp6 PE=1 SV=5
          Length = 1790

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = -1

Query: 253 QSELRAHFNRQEYPYIHGSYSHGSY*FDTSEVRHFSGS*NARLY 122
           Q E R  F+R + PY   SYS  SY +  S     SGS  +R Y
Sbjct: 677 QKERRRSFSRSKSPYSGSSYSRSSYTYSKSR----SGSTRSRSY 716


>sp|Q7Z6E9|RBBP6_HUMAN Retinoblastoma-binding protein 6 OS=Homo
           sapiens GN=RBBP6 PE=1 SV=1
          Length = 1792

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = -1

Query: 253 QSELRAHFNRQEYPYIHGSYSHGSY*FDTSEVRHFSGS*NARLY 122
           Q E R  F+R + PY   SYS  SY +  S     SGS  +R Y
Sbjct: 676 QKERRRSFSRSKSPYSGSSYSRSSYTYSKSR----SGSTRSRSY 715


>sp|P42087|HUTM_BACSU Putative histidine permease OS=Bacillus
           subtilis GN=hutM PE=3 SV=1
          Length = 475

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 308 FLSPSTGSKL*YSFSVSWAI*VESPF*PSGISLHSW 201
           F+ PSTG  +   + ++W + V S F  SGI +  W
Sbjct: 87  FIGPSTGFMVGIMYWINWVVTVGSEFTASGILMQRW 122


>sp|P0ACY3|YEAG_ECOLI Uncharacterized protein yeaG OS=Escherichia
           coli (strain K12) GN=yeaG PE=3 SV=1
          Length = 644

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
 Frame = +1

Query: 196 SYHECKD---IPDG*NGLSTQIAQETLNEYYNFEPV 294
           SY E +D   + +G NGLST+ A + L+  +NF+ V
Sbjct: 402 SYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHV 437


>sp|P0ACY4|YEAG_ECOL6 Uncharacterized protein yeaG OS=Escherichia
           coli O6 GN=yeaG PE=3 SV=1
          Length = 644

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
 Frame = +1

Query: 196 SYHECKD---IPDG*NGLSTQIAQETLNEYYNFEPV 294
           SY E +D   + +G NGLST+ A + L+  +NF+ V
Sbjct: 402 SYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHV 437


>sp|P0ACY5|YEAG_ECO57 Uncharacterized protein yeaG OS=Escherichia
           coli O157:H7 GN=yeaG PE=3 SV=1
          Length = 644

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
 Frame = +1

Query: 196 SYHECKD---IPDG*NGLSTQIAQETLNEYYNFEPV 294
           SY E +D   + +G NGLST+ A + L+  +NF+ V
Sbjct: 402 SYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHV 437


>sp|Q96RW7|HMCN1_HUMAN Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2
          Length = 5635

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
 Frame = -1

Query: 355  SPGNFSCLAGPGQRL--------------NFSPLAQVQSYNTRLVSLGQSELRAHFNRQE 218
            +PG+F C+  PGQ L              N+    Q  SYN    S  ++  +   + ++
Sbjct: 5333 TPGSFKCICPPGQHLLGDGKSCAGLERLPNYG--TQYSSYNLARFSPVRNNYQPQQHYRQ 5390

Query: 217  YPYIHGSYS 191
            Y +++ SYS
Sbjct: 5391 YSHLYSSYS 5399


>sp|O00097|ADH1_PICST Alcohol dehydrogenase 1 OS=Pichia stipitis
           GN=ADH1 PE=3 SV=1
          Length = 348

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -1

Query: 361 QISPGNFSCLAGPGQRLNFSPLAQVQSYNTRLVSLGQSELRAHF 230
           QI PGN+ C++G G  L    +   ++   R++++   E +  F
Sbjct: 167 QIQPGNWVCISGAGGGLGSLAIQYAKAMGFRVIAIDGGEEKGEF 210

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916739|Adiantum capillus-veneris mRNA, clone:
YMU001_000091_A05.
         (376 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8TTF5|Q8TTF5_METAC Predicted protein OS=Methanosarcina aceti...    33   9.2  

>tr|Q8TTF5|Q8TTF5_METAC Predicted protein OS=Methanosarcina
           acetivorans GN=MA_0482 PE=4 SV=1
          Length = 138

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +3

Query: 15  QGNFVRPAVHPIRQATRASQLLSKRDQRMGKC*PIKYSRAFQDPEKCLTSEVSN 176
           Q  F+RP V+P+    +     S R + MG C P+ +    Q    C+  ++S+
Sbjct: 23  QSLFIRPTVYPVECTAKNENFNSIRRKIMGGCDPVTFHNVNQSVFDCIKKKLSD 76