NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916742
Clone id YMU001_000091_A09
Library
Length 484
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000091_A09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GGTGGAACACGGGGTGTGGTTGGACGAGGAAGGAGGGGTGTGGTTGGATACAGAGCACGC
TTGCGATGTGAAGGTGTGCATTTTGCCTCCCCACGAGCAAGGAAAGAACCCTGCTCCTAC
CCCTTCTGCCGTCTATGCTCCCTCTCGCCTCCTTTGCACCATCCCGTACTTCCAGGCTTG
TCATCAGCGAGCCGTGGCAGGAGAATACCCCTTCCTCGTCATTTCCTCATCGTCGGATCA
CCTTGGAATGCGTGGATCCCAGCTCGCCCTCCGATTACCGCAATTGCCTGCTCTTCCTTG
CCCCTCGAGAGCCCGTGCAGATGTCTGTGGATGTCGGCATTAGGTTGCTCCGGGCTGCTG
ACCATCTCCTTTATCAAGAATGTGCAGATGATTGCATGGCTTACCTCGCCTCTGCTCCTT
GGTCTGACAAGGAAGAAGAGGCCATCGATGATGCCATCTCCAGCATGGGCCTGAAGCCCT
CCAG
■■Homology search results ■■ -
sp_hit_id P50407
Definition sp|P50407|5HT7R_CAVPO 5-hydroxytryptamine receptor 7 OS=Cavia porcellus
Align length 42
Score (bit) 31.6
E-value 2.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916742|Adiantum capillus-veneris mRNA, clone:
YMU001_000091_A09.
         (484 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P50407|5HT7R_CAVPO 5-hydroxytryptamine receptor 7 OS=Cavia po...    32   2.0  
sp|O69853|Y6023_STRCO Exopolysaccharide phosphotransferase SCO60...    31   3.4  
sp|P32305|5HT7R_RAT 5-hydroxytryptamine receptor 7 OS=Rattus nor...    30   4.4  
sp|P32304|5HT7R_MOUSE 5-hydroxytryptamine receptor 7 OS=Mus musc...    30   4.4  
sp|Q5BDG7|CFT1_EMENI Protein cft1 OS=Emericella nidulans GN=cft1...    30   4.4  
sp|Q9Z0G4|WISP2_MOUSE WNT1-inducible-signaling pathway protein 2...    30   5.7  
sp|O76076|WISP2_HUMAN WNT1-inducible-signaling pathway protein 2...    30   5.7  
sp|A1Z6W3|PRIC1_DROME Protein prickle OS=Drosophila melanogaster...    30   5.7  
sp|O97394|SDK_DROME Protein sidekick OS=Drosophila melanogaster ...    30   7.5  
sp|Q4PA36|MON1_USTMA Vacuolar fusion protein MON1 OS=Ustilago ma...    29   9.8  

>sp|P50407|5HT7R_CAVPO 5-hydroxytryptamine receptor 7 OS=Cavia
           porcellus GN=HTR7 PE=2 SV=1
          Length = 446

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
 Frame = +1

Query: 226 LIVGSPWNAWIP------ARPPITAIACSSLPLESPCRCLWM 333
           +IVG+    W+P      ARP I   ACS +PL     CLW+
Sbjct: 332 IIVGAFTVCWLPFFLLSTARPFICGTACSCIPLWVERTCLWL 373


>sp|O69853|Y6023_STRCO Exopolysaccharide phosphotransferase SCO6023
           OS=Streptomyces coelicolor GN=SCO6023 PE=3 SV=1
          Length = 586

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
 Frame = +2

Query: 14  VWLDEEGGVWLDTEHACDVKVCILPPHEQGKNPAPTPSAV---YAPSRLLCTIPY----- 169
           VW D  G + L  EH+CD++       E G+  AP P+ V    +P     T+P      
Sbjct: 189 VWSDPTGSLVLGLEHSCDIEFW---KPEAGRLVAPRPNRVTQDVSPREPRVTVPVSRLTG 245

Query: 170 FQACHQR 190
           F A H R
Sbjct: 246 FAALHTR 252


>sp|P32305|5HT7R_RAT 5-hydroxytryptamine receptor 7 OS=Rattus
           norvegicus GN=Htr7 PE=2 SV=2
          Length = 448

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
 Frame = +1

Query: 226 LIVGSPWNAWIP------ARPPITAIACSSLPLESPCRCLWM 333
           +IVG+    W+P      ARP I   +CS +PL     CLW+
Sbjct: 334 IIVGAFTVCWLPFFLLSTARPFICGTSCSCIPLWVERTCLWL 375


>sp|P32304|5HT7R_MOUSE 5-hydroxytryptamine receptor 7 OS=Mus
           musculus GN=Htr7 PE=2 SV=1
          Length = 448

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
 Frame = +1

Query: 226 LIVGSPWNAWIP------ARPPITAIACSSLPLESPCRCLWM 333
           +IVG+    W+P      ARP I   +CS +PL     CLW+
Sbjct: 334 IIVGAFTVCWLPFFLLSTARPFICGTSCSCIPLWVERTCLWL 375


>sp|Q5BDG7|CFT1_EMENI Protein cft1 OS=Emericella nidulans GN=cft1 PE=3
            SV=1
          Length = 1339

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
 Frame = -3

Query: 416  SRGE--VSHAIICTFLIKEMVSSPEQPNADIHRHLHGLSRGK-EEQAIAVIGGRAGIHAF 246
            +RGE   S   I  F + E+V  PEQP  +    L G    K    A++ IGG+  + A 
Sbjct: 1016 ARGEDIPSRGCIYVFEVIEVVPDPEQPETNRRLKLIGKEPVKGAVTALSEIGGQGFLIAA 1075

Query: 245  QGDPTM-RK*RGRGILLP 195
            QG  +M R  +  G LLP
Sbjct: 1076 QGQKSMVRGLKEDGSLLP 1093


>sp|Q9Z0G4|WISP2_MOUSE WNT1-inducible-signaling pathway protein 2
           OS=Mus musculus GN=Wisp2 PE=2 SV=1
          Length = 251

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -2

Query: 429 CQTKEQRRGKPCNHLHILDKGDGQ--QPGA 346
           C+   +R G+ C+HLH+ D   G   QPGA
Sbjct: 53  CRVCARRLGESCDHLHVCDPSQGLVCQPGA 82


>sp|O76076|WISP2_HUMAN WNT1-inducible-signaling pathway protein 2
           OS=Homo sapiens GN=WISP2 PE=1 SV=1
          Length = 250

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -2

Query: 429 CQTKEQRRGKPCNHLHILDKGDGQ--QPGA 346
           C+   +R G+PC+ LH+ D   G   QPGA
Sbjct: 53  CRVCARRLGEPCDQLHVCDASQGLVCQPGA 82


>sp|A1Z6W3|PRIC1_DROME Protein prickle OS=Drosophila melanogaster
            GN=pk PE=1 SV=1
          Length = 1299

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
 Frame = -3

Query: 284  IAVIGGRAGIHAFQGDPTMRK*-RGRGI--LLPRLADDKPGSTGWCKGGEREHRRQKG*E 114
            ++++ G +      G+P  +K  R  GI   LPR         G   GGERE  R K  E
Sbjct: 1088 VSILSGASSSSPMSGEPAKKKGVRFEGIPDTLPRSRSYSGNGAGTSGGGERERDRDKDKE 1147

Query: 113  QGSFLARGEAKCTPSHRK 60
             G     G +      RK
Sbjct: 1148 GGGRHGHGHSSRRRRRRK 1165


>sp|O97394|SDK_DROME Protein sidekick OS=Drosophila melanogaster
            GN=sdk PE=1 SV=2
          Length = 2224

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 8    HGVWLDEEGGVWLDTEHACDVKVCILPPHEQGKNPAPTPSAVY 136
            HG+  +E   V  D +   + ++ +LP + QG  PA  P+AVY
Sbjct: 1633 HGI--NENSVVLSDLQQDRNYEIVVLPFNSQGPGPATPPAAVY 1673


>sp|Q4PA36|MON1_USTMA Vacuolar fusion protein MON1 OS=Ustilago
           maydis GN=MON1 PE=3 SV=1
          Length = 887

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 90  GGKMHTFTSQACSVSNHTPPSSSNHTPCST 1
           G    T T  A S+S H P +SSN T  ST
Sbjct: 68  GANTSTATDAASSISQHEPSTSSNSTRAST 97
tr_hit_id A9TH62
Definition tr|A9TH62|A9TH62_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 75
Score (bit) 43.5
E-value 0.005
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916742|Adiantum capillus-veneris mRNA, clone:
YMU001_000091_A09.
         (484 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TH62|A9TH62_PHYPA Predicted protein OS=Physcomitrella paten...    44   0.005
tr|A7QU29|A7QU29_VITVI Chromosome chr2 scaffold_176, whole genom...    42   0.012
tr|A9SGQ9|A9SGQ9_PHYPA Predicted protein OS=Physcomitrella paten...    42   0.020
tr|B8LN85|B8LN85_PICSI Putative uncharacterized protein OS=Picea...    40   0.057
tr|Q75KA7|Q75KA7_ORYSJ Os03g0769400 protein OS=Oryza sativa subs...    40   0.075
tr|A2XMC4|A2XMC4_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.075
tr|A9SVW5|A9SVW5_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.098
tr|B4F8C5|B4F8C5_MAIZE Putative uncharacterized protein OS=Zea m...    38   0.22 
tr|A9P2L7|A9P2L7_PICSI Putative uncharacterized protein OS=Picea...    38   0.22 
tr|A9NW95|A9NW95_PICSI Putative uncharacterized protein OS=Picea...    38   0.22 
tr|A7PV27|A7PV27_VITVI Chromosome chr4 scaffold_32, whole genome...    38   0.22 
tr|Q8H3R1|Q8H3R1_ORYSJ Os07g0668800 protein OS=Oryza sativa subs...    38   0.28 
tr|A3BN83|A3BN83_ORYSJ Putative uncharacterized protein OS=Oryza...    38   0.28 
tr|A2YPR4|A2YPR4_ORYSI Putative uncharacterized protein OS=Oryza...    38   0.28 
tr|B8A016|B8A016_MAIZE Putative uncharacterized protein OS=Zea m...    37   0.49 
tr|B6UB24|B6UB24_MAIZE Putative uncharacterized protein OS=Zea m...    37   0.49 
tr|A6FQA5|A6FQA5_9RHOB Putative uncharacterized protein OS=Roseo...    37   0.63 
tr|A7P917|A7P917_VITVI Chromosome chr3 scaffold_8, whole genome ...    37   0.63 
tr|A5B6C7|A5B6C7_VITVI Putative uncharacterized protein OS=Vitis...    37   0.63 
tr|Q2QMP5|Q2QMP5_ORYSJ Expressed protein OS=Oryza sativa subsp. ...    36   0.83 
tr|B8LRN8|B8LRN8_PICSI Putative uncharacterized protein OS=Picea...    36   0.83 
tr|A3CJ37|A3CJ37_ORYSJ Putative uncharacterized protein OS=Oryza...    36   0.83 
tr|Q9SVM0|Q9SVM0_ARATH Putative uncharacterized protein F18B3.60...    36   1.1  
tr|Q3YI76|Q3YI76_ARALY At5g63850-like protein (Fragment) OS=Arab...    36   1.1  
tr|Q9SNT6|Q9SNT6_ORYSJ Os06g0129200 protein OS=Oryza sativa subs...    35   1.4  
tr|Q9CAJ9|Q9CAJ9_ARATH Putative uncharacterized protein T12P18.1...    35   1.4  
tr|Q3YIL4|Q3YIL4_ARATH At5g63850 (Fragment) OS=Arabidopsis thali...    35   1.4  
tr|Q3YIK9|Q3YIK9_ARATH At5g63850 (Fragment) OS=Arabidopsis thali...    35   1.4  
tr|Q3YIK2|Q3YIK2_ARATH At5g63850 (Fragment) OS=Arabidopsis thali...    35   1.4  
tr|Q3YIK0|Q3YIK0_ARATH At5g63850 (Fragment) OS=Arabidopsis thali...    35   1.4  

>tr|A9TH62|A9TH62_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_92714 PE=4 SV=1
          Length = 521

 Score = 43.5 bits (101), Expect = 0.005
 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
 Frame = +3

Query: 267 PSDYRNCLLFLAPREPVQMS---VDVGIRLLRAADHLLYQECADDCMAYLASAPWSDKEE 437
           P  Y  C+  L   E    S   V   I +L  A  L++QEC D CM YLA  PW+    
Sbjct: 177 PRAYTRCMQLLYGPEISPSSFANVAHAIEVLPVAAQLVFQECVDACMRYLAVMPWNAVSL 236

Query: 438 EAIDDAISSMGLKPS 482
             I  A+S+  + P+
Sbjct: 237 SEIRSAVSAFQIAPT 251


>tr|A7QU29|A7QU29_VITVI Chromosome chr2 scaffold_176, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00006673001
           PE=4 SV=1
          Length = 431

 Score = 42.4 bits (98), Expect = 0.012
 Identities = 21/49 (42%), Positives = 28/49 (57%)
 Frame = +3

Query: 324 SVDVGIRLLRAADHLLYQECADDCMAYLASAPWSDKEEEAIDDAISSMG 470
           SV   I +L+ A  L  +E    C+ YL + PW DKEEE I  A+S +G
Sbjct: 93  SVKTAIGILQVAVALHCEEITRSCIQYLEAIPWEDKEEEEILKAVSKLG 141


>tr|A9SGQ9|A9SGQ9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_79201 PE=4 SV=1
          Length = 471

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
 Frame = +3

Query: 264 SPSDYRNCLLFLAPREPVQMS---VDVGIRLLRAADHLLYQECADDCMAYLASAPWSDKE 434
           +P  Y  C+  L   E    S   V   I +L  A  L++QEC D CM YLA  PW+   
Sbjct: 140 NPRAYTRCMQLLYGPEISPSSFANVAHAIEVLPVAAQLVFQECVDACMRYLAVMPWNAAN 199

Query: 435 EEAIDDAISSMGLKPS 482
              I  A+++  + P+
Sbjct: 200 LFDIRSAVAAFQIAPT 215


>tr|B8LN85|B8LN85_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 360

 Score = 40.0 bits (92), Expect = 0.057
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +3

Query: 324 SVDVGIRLLRAADHLLYQECADDCMAYLASAPWSDKEEEAIDDAISSM 467
           S D  + +L  A  LL+Q+C  +CM YL +  W+  +E  + D +SS+
Sbjct: 94  STDEVLAILPIASELLFQDCIQECMRYLDAVYWNPAQEAQLVDLLSSL 141


>tr|Q75KA7|Q75KA7_ORYSJ Os03g0769400 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBb0106M04.9 PE=4 SV=1
          Length = 522

 Score = 39.7 bits (91), Expect = 0.075
 Identities = 17/56 (30%), Positives = 32/56 (57%)
 Frame = +3

Query: 300 APREPVQMSVDVGIRLLRAADHLLYQECADDCMAYLASAPWSDKEEEAIDDAISSM 467
           A +  ++ SV   +R+L+ A+ L +Q C   C+ YL + PW  +EEE +  ++  +
Sbjct: 192 AKQRLIKQSVPRVLRILKVAELLGFQACVLSCLEYLEAVPWVGEEEENVVSSVQHL 247


>tr|A2XMC4|A2XMC4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_13674 PE=4 SV=1
          Length = 522

 Score = 39.7 bits (91), Expect = 0.075
 Identities = 17/56 (30%), Positives = 32/56 (57%)
 Frame = +3

Query: 300 APREPVQMSVDVGIRLLRAADHLLYQECADDCMAYLASAPWSDKEEEAIDDAISSM 467
           A +  ++ SV   +R+L+ A+ L +Q C   C+ YL + PW  +EEE +  ++  +
Sbjct: 192 AKQRLIKQSVPRVLRILKVAELLGFQACVLSCLEYLEAVPWVGEEEENVVSSVQHL 247


>tr|A9SVW5|A9SVW5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_136083 PE=4 SV=1
          Length = 462

 Score = 39.3 bits (90), Expect = 0.098
 Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
 Frame = +3

Query: 180 VISEPWQENTPSSSFPHRR------ITLECVDPSSPSDYRNCL--LFLAPREPVQMSVDV 335
           + S+ WQ+   +S+   RR      I L      S S Y   L  ++    +     V+ 
Sbjct: 63  LFSDRWQDQPRTSTQEGRRASKFIHINLSVASGRSVSSYIATLKLMYTHDFDGTICDVES 122

Query: 336 GIRLLRAADHLLYQECADDCMAYLASAPWSDKEEEAIDDAISSMGLKPS 482
            + +L  A  LLY  C   C+ +L +  WS +EE  I   +S + L+ S
Sbjct: 123 ALSILPVAAELLYDHCISVCVRFLEAVAWSREEERQIVHLVSYLQLEES 171


>tr|B4F8C5|B4F8C5_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 434

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 18/49 (36%), Positives = 28/49 (57%)
 Frame = +3

Query: 324 SVDVGIRLLRAADHLLYQECADDCMAYLASAPWSDKEEEAIDDAISSMG 470
           SV   + +LRA++ L  +     C+AY+ + PW D EEE I +   S+G
Sbjct: 95  SVKSALGVLRASNSLGCELVTKGCIAYIEAVPWDDNEEEEILEVARSLG 143


>tr|A9P2L7|A9P2L7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 382

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
 Frame = +3

Query: 216 SSFPHRRITLECVDPSSPSDYRNCLLFLAPREPVQM----SVDVGIRLLRAADHLLYQEC 383
           SS   R   ++  +  +  +Y  C+  L   +  Q     SVD  + +L  A  +++ +C
Sbjct: 53  SSSDKRPFEIKVTNSHNRENYIRCIQLLYSFQEDQRFYFSSVDDALAILPVASQIMFHDC 112

Query: 384 ADDCMAYLASAPWSDKEEEAIDDAISSMGL 473
              CM YL +  WS +++  +   ++S+ L
Sbjct: 113 IQSCMLYLDAVRWSPEQKAKLRALLTSLKL 142


>tr|A9NW95|A9NW95_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 327

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
 Frame = +3

Query: 216 SSFPHRRITLECVDPSSPSDYRNCLLFLAPREPVQM----SVDVGIRLLRAADHLLYQEC 383
           SS   R   ++  +  +  +Y  C+  L   +  Q     SVD  + +L  A  +++ +C
Sbjct: 53  SSSDKRSFEIKVTNSHNRENYIRCIQLLYSFQEDQRFYFSSVDDALAVLPVASQIMFHDC 112

Query: 384 ADDCMAYLASAPWSDKEEEAIDDAISSMGL 473
              CM YL +  WS +++  +   ++S+ L
Sbjct: 113 IQSCMLYLDAVRWSPEQKAKLRALLTSLKL 142