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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916764
Clone id YMU001_000091_C12
Library
Length 390
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000091_C12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CAAGATTTTTCGAACGGTCAATCGGATCCTACGATTATTGATGTAGATGTTGATTAAATG
TCCATGGATCCGATGCTTGAGTTGGGGCCACTATCTAGCTTGTGGACTCATCATGCAGTT
TCCCCGAAGTGAGGAATACCTCAGGTACTAAATGATTATCATGCATAATTTTGGATACAC
AATGCCATCCTCGTGTTTCGTAGTTGGCCAATGTATGATCTGAAGCGCGCAGCAGGGTTA
CAATTGTGGCGAATCAAAGTTCCCTCTGCTGGCCATGAAACGTCATTTCATTTCTTCTAT
AGTAATGCCCCAGAGCCTTATAAATCTCTTGTAATATCAGCAAAAAGGTTTCAACTATAC
ATCCTGAACACGCTGTATTTAATCAGAGGC
■■Homology search results ■■ -
sp_hit_id O83776
Definition sp|O83776|SYM_TREPA Methionyl-tRNA synthetase OS=Treponema pallidum
Align length 55
Score (bit) 29.6
E-value 4.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916764|Adiantum capillus-veneris mRNA, clone:
YMU001_000091_C12.
         (390 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O83776|SYM_TREPA Methionyl-tRNA synthetase OS=Treponema palli...    30   4.9  
sp|Q73NT9|SYM_TREDE Methionyl-tRNA synthetase OS=Treponema denti...    30   4.9  
sp|P42226|STAT6_HUMAN Signal transducer and activator of transcr...    30   4.9  
sp|P35563|5HT3A_RAT 5-hydroxytryptamine receptor 3A OS=Rattus no...    29   6.4  
sp|Q6FQY7|ATG7_CANGA Autophagy-related protein 7 OS=Candida glab...    29   8.4  

>sp|O83776|SYM_TREPA Methionyl-tRNA synthetase OS=Treponema pallidum
           GN=metG PE=3 SV=1
          Length = 811

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +1

Query: 172 WIHNAILVFRSWPMYDLKRAAGLQ--LWRIKVPSAGHETSFHFFYSNAPEPYKSL 330
           W  NA+ +   W    L+  A  +   W + VP AG E    + + +AP  Y S+
Sbjct: 209 WTKNAVRMTEGWLRTGLQERAITRDLRWGVPVPKAGFEQKVFYVWFDAPVGYISI 263


>sp|Q73NT9|SYM_TREDE Methionyl-tRNA synthetase OS=Treponema
           denticola GN=metG PE=3 SV=1
          Length = 793

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +1

Query: 172 WIHNAILVFRSWPMYDLKRAAGLQ--LWRIKVPSAGHETSFHFFYSNAPEPYKSL 330
           W +NA+ + +SW    L+  A  +   W I VP  G E    + + +AP  Y S+
Sbjct: 211 WSNNALQMSKSWLRDGLQERAITRDLKWGIPVPKKGFEDKVFYVWFDAPIGYISI 265


>sp|P42226|STAT6_HUMAN Signal transducer and activator of
           transcription 6 OS=Homo sapiens GN=STAT6 PE=1 SV=1
          Length = 847

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = -3

Query: 358 IVETFLLILQEIYKALGHYYRRNEMTFHGQQREL*FAT 245
           +V TF  ILQ   KA+   +R   M FH +Q EL F T
Sbjct: 95  LVATFRQILQGEKKAVMEQFRHLPMPFHWKQEELKFKT 132


>sp|P35563|5HT3A_RAT 5-hydroxytryptamine receptor 3A OS=Rattus
           norvegicus GN=Htr3a PE=1 SV=2
          Length = 483

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 19/55 (34%), Positives = 23/55 (41%)
 Frame = -3

Query: 361 CIVETFLLILQEIYKALGHYYRRNEMTFHGQQREL*FATIVTLLRASDHTLANYE 197
           CI +  L +   +  A G   RR     H         T   LLR SDH LANY+
Sbjct: 4   CIPQVLLALFLSVLIAQGEGSRRRATQAHS-------TTQPALLRLSDHLLANYK 51


>sp|Q6FQY7|ATG7_CANGA Autophagy-related protein 7 OS=Candida
           glabrata GN=ATG7 PE=3 SV=1
          Length = 623

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 223 SDHTLANYETRGWHCVSKIMHDNHLVPEV 137
           S H L  Y  RGW  V + ++DN+ + E+
Sbjct: 562 SRHILNEYNKRGWDFVKQALNDNNYIEEL 590
tr_hit_id B4MK24
Definition tr|B4MK24|B4MK24_DROWI GK20695 OS=Drosophila willistoni
Align length 55
Score (bit) 35.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916764|Adiantum capillus-veneris mRNA, clone:
YMU001_000091_C12.
         (390 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4MK24|B4MK24_DROWI GK20695 OS=Drosophila willistoni GN=GK206...    35   1.9  
tr|Q292H1|Q292H1_DROPS GA13491 OS=Drosophila pseudoobscura pseud...    34   4.2  
tr|B4GDJ5|B4GDJ5_DROPE GL10845 OS=Drosophila persimilis GN=GL108...    34   4.2  
tr|Q7Q3I3|Q7Q3I3_ANOGA AGAP007891-PA OS=Anopheles gambiae GN=AGA...    33   5.4  
tr|Q16G77|Q16G77_AEDAE Methionine-tRNA synthetase OS=Aedes aegyp...    33   5.4  
tr|Q16FM1|Q16FM1_AEDAE Methionine-tRNA synthetase OS=Aedes aegyp...    33   5.4  
tr|A2I885|A2I885_AEDAE AAEL014709-PA OS=Aedes aegypti GN=Aael_AA...    33   5.4  
tr|Q8MRS4|Q8MRS4_DROME AT05114p OS=Drosophila melanogaster GN=CG...    33   7.1  
tr|B4QD42|B4QD42_DROSI GD25352 OS=Drosophila simulans GN=GD25352...    33   7.1  
tr|B4PBS9|B4PBS9_DROYA GE13875 OS=Drosophila yakuba GN=GE13875 P...    33   7.1  
tr|B4HP29|B4HP29_DROSE GM19865 OS=Drosophila sechellia GN=GM1986...    33   7.1  
tr|B3NKC5|B3NKC5_DROER GG20938 OS=Drosophila erecta GN=GG20938 P...    33   7.1  
tr|A1ZBE9|A1ZBE9_DROME CG15100 OS=Drosophila melanogaster GN=CG1...    33   7.1  

>tr|B4MK24|B4MK24_DROWI GK20695 OS=Drosophila willistoni GN=GK20695
           PE=4 SV=1
          Length = 1016

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +1

Query: 172 WIHNAILVFRSWPMYDLK-RAAGLQL-WRIKVPSAGHETSFHFFYSNAPEPYKSL 330
           W HNA ++ R+W    LK R     L W I VP AG E    + + +AP  Y S+
Sbjct: 464 WTHNARVITRAWLREGLKPRCITRDLKWGIPVPHAGFEKKVFYVWFDAPFGYVSM 518


>tr|Q292H1|Q292H1_DROPS GA13491 OS=Drosophila pseudoobscura
           pseudoobscura GN=GA13491 PE=4 SV=1
          Length = 1021

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +1

Query: 172 WIHNAILVFRSWPMYDLK-RAAGLQL-WRIKVPSAGHETSFHFFYSNAPEPYKSL 330
           W HNA ++ R+W    LK R     L W I VP +G E    + + +AP  Y S+
Sbjct: 464 WTHNAKVITRAWLREGLKPRCITRDLKWGIPVPHSGFEKKVFYVWFDAPFGYVSM 518


>tr|B4GDJ5|B4GDJ5_DROPE GL10845 OS=Drosophila persimilis GN=GL10845
           PE=4 SV=1
          Length = 1021

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +1

Query: 172 WIHNAILVFRSWPMYDLK-RAAGLQL-WRIKVPSAGHETSFHFFYSNAPEPYKSL 330
           W HNA ++ R+W    LK R     L W I VP +G E    + + +AP  Y S+
Sbjct: 464 WTHNAKVITRAWLREGLKPRCITRDLKWGIPVPHSGFEKKVFYVWFDAPFGYVSM 518


>tr|Q7Q3I3|Q7Q3I3_ANOGA AGAP007891-PA OS=Anopheles gambiae
           GN=AGAP007891 PE=4 SV=4
          Length = 977

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +1

Query: 172 WIHNAILVFRSWPMYDLK-RAAGLQL-WRIKVPSAGHETSFHFFYSNAPEPYKSL 330
           W HNA ++ R+W    LK R     L W I VP  G+E    + + +AP  Y S+
Sbjct: 469 WTHNARVITRAWLKEGLKSRCITRDLKWGIPVPLEGYEKKVFYVWFDAPIGYISI 523


>tr|Q16G77|Q16G77_AEDAE Methionine-tRNA synthetase OS=Aedes aegypti
           GN=AAEL014494 PE=4 SV=1
          Length = 966

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +1

Query: 172 WIHNAILVFRSWPMYDLK-RAAGLQL-WRIKVPSAGHETSFHFFYSNAPEPYKSL 330
           W HNA ++ R+W    LK R     L W I VP  G+E    + + +AP  Y S+
Sbjct: 466 WTHNARVITRAWLKEGLKSRCITRDLKWGIPVPLEGYEDKVFYVWFDAPIGYISM 520


>tr|Q16FM1|Q16FM1_AEDAE Methionine-tRNA synthetase OS=Aedes aegypti
           GN=AAEL014709 PE=4 SV=1
          Length = 966

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +1

Query: 172 WIHNAILVFRSWPMYDLK-RAAGLQL-WRIKVPSAGHETSFHFFYSNAPEPYKSL 330
           W HNA ++ R+W    LK R     L W I VP  G+E    + + +AP  Y S+
Sbjct: 466 WTHNARVITRAWLKEGLKSRCITRDLKWGIPVPLEGYEDKVFYVWFDAPIGYISM 520


>tr|A2I885|A2I885_AEDAE AAEL014709-PA OS=Aedes aegypti
           GN=Aael_AAEL014709 PE=4 SV=1
          Length = 1019

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +1

Query: 172 WIHNAILVFRSWPMYDLK-RAAGLQL-WRIKVPSAGHETSFHFFYSNAPEPYKSL 330
           W HNA ++ R+W    LK R     L W I VP  G+E    + + +AP  Y S+
Sbjct: 466 WTHNARVITRAWLKEGLKSRCITRDLKWGIPVPLEGYEDKVFYVWFDAPIGYISM 520


>tr|Q8MRS4|Q8MRS4_DROME AT05114p OS=Drosophila melanogaster
           GN=CG15100 PE=2 SV=1
          Length = 1012

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +1

Query: 172 WIHNAILVFRSWPMYDLK-RAAGLQL-WRIKVPSAGHETSFHFFYSNAPEPYKSL 330
           W HNA ++ R+W    LK R     L W I VP  G E    + + +AP  Y S+
Sbjct: 464 WTHNAKVITRAWLKEGLKPRCITRDLKWGIPVPHEGFEKKVFYVWFDAPFGYVSM 518


>tr|B4QD42|B4QD42_DROSI GD25352 OS=Drosophila simulans GN=GD25352
           PE=4 SV=1
          Length = 1022

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +1

Query: 172 WIHNAILVFRSWPMYDLK-RAAGLQL-WRIKVPSAGHETSFHFFYSNAPEPYKSL 330
           W HNA ++ R+W    LK R     L W I VP  G E    + + +AP  Y S+
Sbjct: 464 WTHNAKVITRAWLKEGLKPRCITRDLKWGIPVPHEGFEKKVFYVWFDAPFGYVSM 518


>tr|B4PBS9|B4PBS9_DROYA GE13875 OS=Drosophila yakuba GN=GE13875 PE=4
           SV=1
          Length = 1021

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +1

Query: 172 WIHNAILVFRSWPMYDLK-RAAGLQL-WRIKVPSAGHETSFHFFYSNAPEPYKSL 330
           W HNA ++ R+W    LK R     L W I VP  G E    + + +AP  Y S+
Sbjct: 464 WTHNAKVITRAWLKEGLKPRCITRDLKWGIPVPHEGFEKKVFYVWFDAPFGYVSM 518