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NBDC - LSDB Archive
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BP916767
Clone id YMU001_000091_D03
Library
Length 396
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000091_D03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTCGGACTAAGGCCAACAATTTAAGGGCGAAGTCCTCCAGATCCTTACATCCTCCCTCGG
CATCCAACAGGTATTCACATCTCCATACCATCCCCAAACCAATGGGTCGACAGAGCGCCT
GAATCGCACAATTAAACAGGTCATTTCTGCATATGTTGACCCCTTGCATCAGAATTGGGA
TGAAGTCCTGCCATATGCAGTATATGCATACAACACATCTGTACAATCGTCCACCAAGGT
GAGTCCCTTCAGGGCATTATTCAATCGTGATCCCCGTCTTCCTCCCGATATGCTCACCCT
CAACCTTCATCCCACTAAAAAGGAGGCAGCTGACTGATTACTCCATATGCAAAAAATGCA
AGCTATTATGCGGGTTGCACTCTGCAACAACCTCCA
■■Homology search results ■■ -
sp_hit_id P27401
Definition sp|P27401|POL_SFV3L Pro-Pol polyprotein OS=Simian foamy virus type 3 (strain LK3)
Align length 94
Score (bit) 60.8
E-value 2.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916767|Adiantum capillus-veneris mRNA, clone:
YMU001_000091_D03.
         (396 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27401|POL_SFV3L Pro-Pol polyprotein OS=Simian foamy virus ty...    61   2e-09
sp|P23074|POL_SFV1 Pro-Pol polyprotein OS=Simian foamy virus typ...    61   2e-09
sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from tra...    60   3e-09
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa...    59   8e-09
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa...    57   2e-08
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot...    54   2e-07
sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot...    54   2e-07
sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot...    54   2e-07
sp|P03356|POL_MLVAV Pol polyprotein OS=AKV murine leukemia virus...    54   2e-07
sp|O93209|POL_FFV Pro-Pol polyprotein OS=Feline foamy virus GN=p...    54   3e-07
sp|P14350|POL_FOAMV Pro-Pol polyprotein OS=Human spumaretrovirus...    52   9e-07
sp|P31795|POL_MLVRK Pol polyprotein (Fragment) OS=Radiation muri...    51   2e-06
sp|P11227|POL_MLVRD Pol polyprotein OS=Radiation murine leukemia...    51   2e-06
sp|P26808|POL_MLVFP Pol polyprotein OS=Friend murine leukemia vi...    49   1e-05
sp|P26809|POL_MLVFF Pol polyprotein OS=Friend murine leukemia vi...    49   1e-05
sp|P26810|POL_MLVF5 Pol polyprotein OS=Friend murine leukemia vi...    49   1e-05
sp|P03359|POL_WMSV Pol polyprotein (Fragment) OS=Woolly monkey s...    48   1e-05
sp|P03355|POL_MLVMO Pol polyprotein OS=Moloney murine leukemia v...    48   1e-05
sp|P08361|POL_MLVCB Pol polyprotein (Fragment) OS=Cas-Br-E murin...    48   1e-05
sp|Q9TTC1|POL_KORV Pro-Pol polyprotein OS=Koala retrovirus GN=pr...    47   3e-05
sp|P21414|POL_GALV Pol polyprotein OS=Gibbon ape leukemia virus ...    47   3e-05
sp|P31792|POL_FENV1 Pol polyprotein (Fragment) OS=Feline endogen...    46   7e-05
sp|P03360|POL_AVIRE Pol polyprotein (Fragment) OS=Avian reticulo...    45   9e-05
sp|P10272|POL_BAEVM Pol polyprotein OS=Baboon endogenous virus (...    45   1e-04
sp|A4FUB7|GIN1_BOVIN Gypsy retrotransposon integrase-like protei...    45   1e-04
sp|Q6ZNG9|KRBA2_HUMAN KRAB-A domain-containing protein 2 OS=Homo...    44   3e-04
sp|Q5RBK0|GIN1_PONAB Gypsy retrotransposon integrase-like protei...    43   6e-04
sp|P16901|POL_OMVVS Pol polyprotein OS=Ovine maedi visna related...    42   7e-04
sp|P03371|POL_EIAVY Pol polyprotein OS=Equine infectious anemia ...    42   7e-04
sp|P32542|POL_EIAVC Pol polyprotein OS=Equine infectious anemia ...    42   7e-04

>sp|P27401|POL_SFV3L Pro-Pol polyprotein OS=Simian foamy virus type 3
            (strain LK3) GN=pol PE=3 SV=2
          Length = 1143

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 32/94 (34%), Positives = 47/94 (50%)
 Frame = +2

Query: 2    SD*GQQFKGEVLQILTSSLGIQQVFTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWD 181
            SD G  F          + GIQ  F++PYHPQ++G  ER N  IK++++  +      W 
Sbjct: 934  SDQGAAFTSATFADWAKNKGIQLEFSTPYHPQSSGKVERKNSDIKRLLTKLLVGRPAKWY 993

Query: 182  EVLPYAVYAYNTSVQSSTKVSPFRALFNRDPRLP 283
            ++LP    A N S   S+K +P + LF  D   P
Sbjct: 994  DLLPVVQLALNNSYSPSSKYTPHQLLFGIDSNTP 1027


>sp|P23074|POL_SFV1 Pro-Pol polyprotein OS=Simian foamy virus type 1
            GN=pol PE=1 SV=3
          Length = 1149

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 32/94 (34%), Positives = 46/94 (48%)
 Frame = +2

Query: 2    SD*GQQFKGEVLQILTSSLGIQQVFTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWD 181
            SD G  F            GIQ  F++PYHPQ++G  ER N  IK++++  +      W 
Sbjct: 934  SDQGAAFTSSTFADWAKEKGIQLEFSTPYHPQSSGKVERKNSDIKRLLTKLLIGRPAKWY 993

Query: 182  EVLPYAVYAYNTSVQSSTKVSPFRALFNRDPRLP 283
            ++LP    A N S   S+K +P + LF  D   P
Sbjct: 994  DLLPVVQLALNNSYSPSSKYTPHQLLFGVDSNTP 1027


>sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from
            transposon 412 OS=Drosophila melanogaster GN=POL PE=4
            SV=1
          Length = 1237

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 29/94 (30%), Positives = 49/94 (52%)
 Frame = +2

Query: 2    SD*GQQFKGEVLQILTSSLGIQQVFTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWD 181
            +D G ++K  ++  L   L I+ + ++ +H QT G  ER +RT+ + I +Y+     +WD
Sbjct: 1030 TDMGTEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYISTDKTDWD 1089

Query: 182  EVLPYAVYAYNTSVQSSTKVSPFRALFNRDPRLP 283
              L Y VY +NT+        P+  +F R   LP
Sbjct: 1090 VWLQYFVYCFNTTQSMVHNYCPYELVFGRTSNLP 1123


>sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2
          Length = 1498

 Score = 58.9 bits (141), Expect = 8e-09
 Identities = 32/94 (34%), Positives = 47/94 (50%)
 Frame = +2

Query: 2    SD*GQQFKGEVLQILTSSLGIQQVFTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWD 181
            SD   +   +  Q LT  LGI+   +S  HPQT+G +ER  +T+ +++ AYV    QNW 
Sbjct: 1261 SDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYVSTNIQNWH 1320

Query: 182  EVLPYAVYAYNTSVQSSTKVSPFRALFNRDPRLP 283
              LP   + YN++   +   SPF       P  P
Sbjct: 1321 VYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTP 1354


>sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3
          Length = 1547

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 31/94 (32%), Positives = 46/94 (48%)
 Frame = +2

Query: 2    SD*GQQFKGEVLQILTSSLGIQQVFTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWD 181
            SD   +   +  Q LT  LGI+   +S  HPQT+G +ER  +T+ +++ AY     QNW 
Sbjct: 1235 SDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYASTNIQNWH 1294

Query: 182  EVLPYAVYAYNTSVQSSTKVSPFRALFNRDPRLP 283
              LP   + YN++   +   SPF       P  P
Sbjct: 1295 VYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTP 1328


>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein
            type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1
          Length = 1333

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 22/71 (30%), Positives = 40/71 (56%)
 Frame = +2

Query: 74   FTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWDEVLPYAVYAYNTSVQSSTKVSPFR 253
            F+ PY PQT+G TER N+T+++++          W + +     +YN ++ S+T+++PF 
Sbjct: 1073 FSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFE 1132

Query: 254  ALFNRDPRLPP 286
             +    P L P
Sbjct: 1133 IVHRYSPALSP 1143


>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein
            type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1
          Length = 1333

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 22/71 (30%), Positives = 40/71 (56%)
 Frame = +2

Query: 74   FTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWDEVLPYAVYAYNTSVQSSTKVSPFR 253
            F+ PY PQT+G TER N+T+++++          W + +     +YN ++ S+T+++PF 
Sbjct: 1073 FSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFE 1132

Query: 254  ALFNRDPRLPP 286
             +    P L P
Sbjct: 1133 IVHRYSPALSP 1143


>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein
            type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1
          Length = 1333

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 22/71 (30%), Positives = 40/71 (56%)
 Frame = +2

Query: 74   FTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWDEVLPYAVYAYNTSVQSSTKVSPFR 253
            F+ PY PQT+G TER N+T+++++          W + +     +YN ++ S+T+++PF 
Sbjct: 1073 FSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFE 1132

Query: 254  ALFNRDPRLPP 286
             +    P L P
Sbjct: 1133 IVHRYSPALSP 1143


>sp|P03356|POL_MLVAV Pol polyprotein OS=AKV murine leukemia virus
            GN=pol PE=3 SV=2
          Length = 1196

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
 Frame = +2

Query: 2    SD*GQQFKGEVLQILTSSLGIQQVFTSPYHPQTNGSTERLNRTIKQVISAY-VDPLHQNW 178
            SD G  F  +V Q +   LGI       Y PQ++G  ER+NRTIK+ ++   +    ++W
Sbjct: 974  SDNGPAFTSQVSQSVADLLGIDWKLHCAYRPQSSGQVERMNRTIKETLTKLTLAAGTRDW 1033

Query: 179  DEVLPYAVY-AYNTSVQSSTKVSPFRALFNRDPRL----PPDMLTLNLHPTKKEAAD*LL 343
              +LP A+Y A NT       ++P+  L+   P L     PDM  L   P+ +       
Sbjct: 1034 VLLLPLALYRARNT--PGPHGLTPYEILYGAPPPLVNFHDPDMSELTNSPSLQ------A 1085

Query: 344  HMQKMQAIMR 373
            H+Q +Q + R
Sbjct: 1086 HLQALQTVQR 1095


>sp|O93209|POL_FFV Pro-Pol polyprotein OS=Feline foamy virus GN=pol
            PE=3 SV=1
          Length = 1156

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 30/94 (31%), Positives = 45/94 (47%)
 Frame = +2

Query: 2    SD*GQQFKGEVLQILTSSLGIQQVFTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWD 181
            SD G  F  E          IQ  F++PYHPQ++G  ER N  IK++++  +      W 
Sbjct: 936  SDQGSAFTSEEFAQWAKERNIQLEFSTPYHPQSSGKVERKNSEIKKLLTKLLVGRPLKWY 995

Query: 182  EVLPYAVYAYNTSVQSSTKVSPFRALFNRDPRLP 283
             ++     A N +   STK +P + +F  D  LP
Sbjct: 996  NLISSVQLALNNTHVVSTKYTPHQLMFGIDCNLP 1029
tr_hit_id A1YGR9
Definition tr|A1YGR9|A1YGR9_9BILA Putative pol protein OS=Philodina roseola
Align length 94
Score (bit) 87.8
E-value 2.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916767|Adiantum capillus-veneris mRNA, clone:
YMU001_000091_D03.
         (396 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A1YGR9|A1YGR9_9BILA Putative pol protein OS=Philodina roseola...    88   2e-16
tr|Q8UUM8|Q8UUM8_ORYLA LReO_3 protein OS=Oryzias latipes GN=LReO...    85   2e-15
tr|Q54AM8|Q54AM8_DICDI Putative uncharacterized protein OS=Dicty...    85   2e-15
tr|Q8S678|Q8S678_ORYSJ Putative polyprotein (Retrotransposon pro...    84   3e-15
tr|Q53JQ7|Q53JQ7_ORYSJ Retrotransposon protein, putative, Ty3-gy...    84   3e-15
tr|Q94H45|Q94H45_ORYSA Putative polyprotein OS=Oryza sativa GN=O...    84   5e-15
tr|Q7XWU1|Q7XWU1_ORYSJ OSJNBa0065B15.10 protein OS=Oryza sativa ...    84   5e-15
tr|Q2QZV3|Q2QZV3_ORYSJ Retrotransposon protein, putative, Ty3-gy...    84   5e-15
tr|Q2QTE5|Q2QTE5_ORYSJ Retrotransposon protein, putative, Ty3-gy...    84   5e-15
tr|Q2QSM6|Q2QSM6_ORYSJ Retrotransposon protein, putative, Ty3-gy...    84   5e-15
tr|Q2QRL6|Q2QRL6_ORYSJ Retrotransposon protein, putative, Ty3-gy...    84   5e-15
tr|Q10IA3|Q10IA3_ORYSJ Retrotransposon protein, putative, Ty3-gy...    84   5e-15
tr|A1YGT4|A1YGT4_9BILA Putative pol protein OS=Adineta vaga PE=4...    84   5e-15
tr|A1YGS5|A1YGS5_9BILA Putative pol protein OS=Adineta vaga PE=4...    84   5e-15
tr|Q69MZ1|Q69MZ1_ORYSJ Putative uncharacterized protein OJ1261_A...    83   6e-15
tr|Q60DB4|Q60DB4_ORYSJ Retrotransposon protein, putative, Ty3-gy...    83   6e-15
tr|Q53J67|Q53J67_ORYSJ Retrotransposon protein, putative, Ty3-gy...    83   6e-15
tr|Q10GE4|Q10GE4_ORYSJ Retrotransposon protein, putative, Ty3-gy...    83   6e-15
tr|A1YGT1|A1YGT1_9BILA Putative pol protein OS=Adineta vaga PE=4...    83   6e-15
tr|A1YGS2|A1YGS2_9BILA Putative pol protein OS=Adineta vaga PE=4...    83   6e-15
tr|Q01MW1|Q01MW1_ORYSA H0207B04.5 protein OS=Oryza sativa GN=H02...    83   8e-15
tr|Q9AYB7|Q9AYB7_ORYSA Similar to Sorghum bicolor 22 kDakafirinc...    82   1e-14
tr|Q9AYB6|Q9AYB6_ORYSA Polyprotein OS=Oryza sativa GN=OSJNBa0094...    82   1e-14
tr|Q94I15|Q94I15_ORYSA Putative retroelement OS=Oryza sativa GN=...    82   1e-14
tr|Q94I09|Q94I09_ORYSA Putative retroelement OS=Oryza sativa GN=...    82   1e-14
tr|Q94I04|Q94I04_ORYSA Putative retroelement OS=Oryza sativa GN=...    82   1e-14
tr|Q8W2R1|Q8W2R1_ORYSA Putative polyprotein OS=Oryza sativa GN=O...    82   1e-14
tr|Q8SB51|Q8SB51_ORYSJ Putative polyprotein (Retrotransposon pro...    82   1e-14
tr|Q8S6W7|Q8S6W7_ORYSA Putative retroelement OS=Oryza sativa GN=...    82   1e-14
tr|Q8S5L6|Q8S5L6_ORYSJ Putative retroelement (Retrotransposon pr...    82   1e-14

>tr|A1YGR9|A1YGR9_9BILA Putative pol protein OS=Philodina roseola PE=4
            SV=1
          Length = 1269

 Score = 87.8 bits (216), Expect = 2e-16
 Identities = 40/94 (42%), Positives = 55/94 (58%)
 Frame = +2

Query: 2    SD*GQQFKGEVLQILTSSLGIQQVFTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWD 181
            SD G  F+ E++  + + +G   +F++PYHPQTNG   R N T    IS   D  + NWD
Sbjct: 1061 SDQGSHFRNELMSSMRTLIGYNHIFSTPYHPQTNGIVGRFNSTFIPQISKLQDSENNNWD 1120

Query: 182  EVLPYAVYAYNTSVQSSTKVSPFRALFNRDPRLP 283
            E L   V+AYN+ V  +T  SP+  L+ R PRLP
Sbjct: 1121 EYLQAVVFAYNSGVHKTTNYSPYELLYGRPPRLP 1154


>tr|Q8UUM8|Q8UUM8_ORYLA LReO_3 protein OS=Oryzias latipes GN=LReO_3
            PE=4 SV=1
          Length = 1498

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 40/98 (40%), Positives = 62/98 (63%)
 Frame = +2

Query: 2    SD*GQQFKGEVLQILTSSLGIQQVFTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWD 181
            +D G  F  ++L+ + S LG++ + T+PYHPQT+G  ER N+T+K ++  +V     +WD
Sbjct: 785  TDCGTNFLSKLLKQVYSLLGVKGIKTTPYHPQTDGLVERFNQTLKTMLRKFVSETGADWD 844

Query: 182  EVLPYAVYAYNTSVQSSTKVSPFRALFNRDPRLPPDML 295
            + LPY ++AY    Q+ST  SPF  L+ R  R P D+L
Sbjct: 845  QWLPYLLFAYREVPQASTGFSPFELLYGRQVRGPLDLL 882


>tr|Q54AM8|Q54AM8_DICDI Putative uncharacterized protein
           OS=Dictyostelium discoideum GN=DDB_0215165 PE=4 SV=1
          Length = 421

 Score = 84.7 bits (208), Expect = 2e-15
 Identities = 40/101 (39%), Positives = 60/101 (59%)
 Frame = +2

Query: 2   SD*GQQFKGEVLQILTSSLGIQQVFTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWD 181
           SD G  F  +V+  +     +++V TSPYHPQT+G  ER N+TI  ++ ++   +H  WD
Sbjct: 132 SDCGTSFLNKVISSVNELFKVKKVNTSPYHPQTDGLVERFNKTIVIMLKSFTQEVHTMWD 191

Query: 182 EVLPYAVYAYNTSVQSSTKVSPFRALFNRDPRLPPDMLTLN 304
             L   ++AY  SV +ST  SPF  L+ R+  +P D+ TLN
Sbjct: 192 LYLDSCLFAYRISVHTSTGASPFSMLYGREATIPSDLGTLN 232


>tr|Q8S678|Q8S678_ORYSJ Putative polyprotein (Retrotransposon protein,
            putative, Ty3-gypsy subclass) OS=Oryza sativa subsp.
            japonica GN=OSJNBa0034B05.15 PE=4 SV=1
          Length = 1859

 Score = 84.0 bits (206), Expect = 3e-15
 Identities = 40/94 (42%), Positives = 59/94 (62%)
 Frame = +2

Query: 2    SD*GQQFKGEVLQILTSSLGIQQVFTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWD 181
            SD G QF     + L   LG +  F++ YHPQT+G TERLN+ +K ++ A V    + WD
Sbjct: 1564 SDRGSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILKDMLRACVLDFGKTWD 1623

Query: 182  EVLPYAVYAYNTSVQSSTKVSPFRALFNRDPRLP 283
            + LPYA ++YN S Q+S +++P+ AL+ R  R P
Sbjct: 1624 KSLPYAEFSYNNSYQASIQMAPYEALYGRKCRTP 1657


>tr|Q53JQ7|Q53JQ7_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os11g26670 PE=4 SV=1
          Length = 1567

 Score = 84.0 bits (206), Expect = 3e-15
 Identities = 40/94 (42%), Positives = 59/94 (62%)
 Frame = +2

Query: 2    SD*GQQFKGEVLQILTSSLGIQQVFTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWD 181
            SD G QF     + L   LG Q  F++ YHPQT+G TERLN+ ++ ++ A V    + WD
Sbjct: 1458 SDRGSQFTSHFWKKLQEELGTQLNFSTAYHPQTDGQTERLNQILEDMLRACVLDFGKTWD 1517

Query: 182  EVLPYAVYAYNTSVQSSTKVSPFRALFNRDPRLP 283
            + LPYA ++YN S Q+S +++P+ AL+ R  R P
Sbjct: 1518 KSLPYAEFSYNNSYQASIQMAPYEALYGRKCRTP 1551


>tr|Q94H45|Q94H45_ORYSA Putative polyprotein OS=Oryza sativa
            GN=OSJNBa0077G22.3 PE=4 SV=1
          Length = 1475

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 40/94 (42%), Positives = 59/94 (62%)
 Frame = +2

Query: 2    SD*GQQFKGEVLQILTSSLGIQQVFTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWD 181
            SD G QF     + L   LG +  F++ YHPQT+G TERLN+ ++ V+ A V    + WD
Sbjct: 1180 SDRGSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDVLRACVLDFGKTWD 1239

Query: 182  EVLPYAVYAYNTSVQSSTKVSPFRALFNRDPRLP 283
            + LPYA ++YN S Q+S +++P+ AL+ R  R P
Sbjct: 1240 KSLPYAEFSYNNSYQASIQMAPYEALYGRKCRTP 1273


>tr|Q7XWU1|Q7XWU1_ORYSJ OSJNBa0065B15.10 protein OS=Oryza sativa
            subsp. japonica GN=OSJNBa0065B15.10 PE=4 SV=2
          Length = 1500

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 40/94 (42%), Positives = 59/94 (62%)
 Frame = +2

Query: 2    SD*GQQFKGEVLQILTSSLGIQQVFTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWD 181
            SD G QF     + L   LG +  F++ YHPQT+G TERLN+ ++ ++ A V    + WD
Sbjct: 1205 SDRGSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLRACVLDFGKTWD 1264

Query: 182  EVLPYAVYAYNTSVQSSTKVSPFRALFNRDPRLP 283
            + LPYA ++YN S QSS +++P+ AL+ R  R P
Sbjct: 1265 KSLPYAEFSYNNSYQSSIQMAPYEALYGRKCRTP 1298


>tr|Q2QZV3|Q2QZV3_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os11g44730 PE=4 SV=1
          Length = 1795

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 40/94 (42%), Positives = 59/94 (62%)
 Frame = +2

Query: 2    SD*GQQFKGEVLQILTSSLGIQQVFTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWD 181
            SD G QF     + L   LG +  F++ YHPQT+G TERLN+ ++ ++ A V    + WD
Sbjct: 1500 SDRGSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLRACVLDFGKTWD 1559

Query: 182  EVLPYAVYAYNTSVQSSTKVSPFRALFNRDPRLP 283
            + LPYA ++YN S QSS +++P+ AL+ R  R P
Sbjct: 1560 KSLPYAEFSYNNSYQSSIQMAPYEALYGRKCRTP 1593


>tr|Q2QTE5|Q2QTE5_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os12g19920 PE=4 SV=1
          Length = 1435

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 40/94 (42%), Positives = 59/94 (62%)
 Frame = +2

Query: 2    SD*GQQFKGEVLQILTSSLGIQQVFTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWD 181
            SD G QF     + L   LG +  F++ YHPQT+G TERLN+ ++ ++ A V    + WD
Sbjct: 1140 SDRGSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLRACVLDFGKTWD 1199

Query: 182  EVLPYAVYAYNTSVQSSTKVSPFRALFNRDPRLP 283
            + LPYA ++YN S QSS +++P+ AL+ R  R P
Sbjct: 1200 KSLPYAEFSYNNSYQSSIQMAPYEALYGRKCRTP 1233


>tr|Q2QSM6|Q2QSM6_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass OS=Oryza sativa subsp. japonica
            GN=LOC_Os12g23580 PE=4 SV=1
          Length = 1758

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 40/94 (42%), Positives = 59/94 (62%)
 Frame = +2

Query: 2    SD*GQQFKGEVLQILTSSLGIQQVFTSPYHPQTNGSTERLNRTIKQVISAYVDPLHQNWD 181
            SD G QF     + L   LG +  F++ YHPQT+G TERLN+ ++ ++ A V    + WD
Sbjct: 1463 SDRGSQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLRACVLDFGKTWD 1522

Query: 182  EVLPYAVYAYNTSVQSSTKVSPFRALFNRDPRLP 283
            + LPYA ++YN S QSS +++P+ AL+ R  R P
Sbjct: 1523 KSLPYAEFSYNNSYQSSIQMAPYEALYGRKCRTP 1556