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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP916771
Clone id YMU001_000091_D07
Library
Length 507
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000091_D07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GATGAGAACCACTAGGGGTACAACACAGTGTAAGGCCGCAAACGTGCCAGAGTCAAGGGC
GGAAGGAAAGCATCGAGCACAGCTAAGCATTGTGGAAGAGGGAGTTAAAACTTAAGAGAT
CAATAACTGCCTCCCACAACCCAATGGGAGGTGGTTGAAGGTTTATTTACTGGTAGTTCC
CACTGGATAATAGGCAATCTATAGAGTTCTAAGGGTGAAAGAAAGCCAAAAGATGGATCA
CACCTAGAGCCAGCACTCATATTGGGAGTAAGCAATTTTATGGGATCAATTAGGGTTCCA
TTTAAGGTATCAGGCATAGTGCCCAAGCTCATTACCACAATGTGGAAGGTTAGAGTCGTC
AAATAGGGCAATCACTAGTGTGACTTCAGATTTTTGTATGCTTCTGAAGAAACCTGATCT
GAATAGCCACAAGACATGCAATATCCAAAGGGATACCCTTTGAACTACCCATGTGGTAGA
GGGTTATCCCAGCATGTCAATAATTAG
■■Homology search results ■■ -
sp_hit_id P04148
Definition sp|P04148|SI25_BOMMO Fibrohexamerin OS=Bombyx mori
Align length 65
Score (bit) 30.8
E-value 3.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916771|Adiantum capillus-veneris mRNA, clone:
YMU001_000091_D07.
         (507 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P04148|SI25_BOMMO Fibrohexamerin OS=Bombyx mori GN=P25 PE=1 SV=1    31   3.8  

>sp|P04148|SI25_BOMMO Fibrohexamerin OS=Bombyx mori GN=P25 PE=1 SV=1
          Length = 220

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 16/65 (24%), Positives = 30/65 (46%)
 Frame = -2

Query: 338 VVMSLGTMPDTLNGTLIDPIKLLTPNMSAGSRCDPSFGFLSPLELYRLPIIQWELPVNKP 159
           V+ S G          +D  K ++ +++A S+C P  G +     Y +P+ Q+E+P    
Sbjct: 13  VLASAGPPSPIYRPCYLDDYKCISDHLAANSKCIPGRGQIP--SQYEIPVFQFEIPYFNA 70

Query: 158 STTSH 144
           +   H
Sbjct: 71  TYVDH 75
tr_hit_id B0XDM1
Definition tr|B0XDM1|B0XDM1_CULQU Neutral ceramidase OS=Culex quinquefasciatus
Align length 31
Score (bit) 34.3
E-value 3.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916771|Adiantum capillus-veneris mRNA, clone:
YMU001_000091_D07.
         (507 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0XDM1|B0XDM1_CULQU Neutral ceramidase OS=Culex quinquefascia...    34   3.5  

>tr|B0XDM1|B0XDM1_CULQU Neutral ceramidase OS=Culex quinquefasciatus
           GN=CpipJ_CPIJ017133 PE=4 SV=1
          Length = 750

 Score = 34.3 bits (77), Expect = 3.5
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -2

Query: 332 MSLGTMPDTLNGTLIDPIKLLTPNMSAGSRC 240
           + LG++PD L G   D I L+TP++  GS+C
Sbjct: 648 VGLGSIPDDLGGIFRDEICLITPSVGQGSKC 678