BP916789 |
Clone id |
YMU001_000091_F03 |
Library |
YMU01 |
Length |
379 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000091_F03. |
Accession |
BP916789 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1132Contig1 |
Sequence |
CCGACCCAAACACCTTAAGGTAGTGCACATTATCAAACACTTTCACCTGCTTCTGTAGAG CAAGAAACTGTTGTTTAACAGCTTCTTTTCCTCCCTTCACATCACGATCAAAATCTTGAG CATTGTAAGATGCCCCAAGGGACTTTAGAACAGCCCCAACCAGCTCCCTCGGTGAGCCTA CCATGGCTATCTGTCCTTTGAGCTCAGGCCTCCAAAGATCTTGCCAATCCTCAAGTGCAG GTATGTTATTCTTTAAGAATTGGTCCTTTTTGTAAGCTATTACCATGCTTCCCCATCGAT ATGGAACTCCCCAAACGAGTCCCTCCGGAGTGAGATCACCATATTGATCTCTTCGAACAA AAGCCTGCCAATTCACGTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P0A2C7 |
Definition |
sp|P0A2C7|POTD_SALTY Spermidine/putrescine-binding periplasmic protein OS=Salmonella typhimurium |
Align length |
81 |
Score (bit) |
48.5 |
E-value |
1.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S2G2 |
Definition |
tr|A9S2G2|A9S2G2_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
123 |
Score (bit) |
174.0 |
E-value |
3.0e-42 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916789|Adiantum capillus-veneris mRNA, clone: YMU001_000091_F03. (379 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S2G2|A9S2G2_PHYPA Predicted protein (Fragment) OS=Physcomit... 174 3e-42 tr|B7ZYY2|B7ZYY2_MAIZE Putative uncharacterized protein OS=Zea m... 161 1e-38 tr|A7QVZ6|A7QVZ6_VITVI Chromosome chr2 scaffold_196, whole genom... 154 3e-36 tr|Q7XSS1|Q7XSS1_ORYSJ OSJNBa0041A02.11 protein (Putative unchar... 150 3e-35 tr|Q0JAF3|Q0JAF3_ORYSJ Os04g0602200 protein (Fragment) OS=Oryza ... 150 3e-35 tr|Q01HT2|Q01HT2_ORYSA B0403H10-OSIGBa0105A11.16 protein OS=Oryz... 150 3e-35 tr|B8ATW8|B8ATW8_ORYSI Putative uncharacterized protein OS=Oryza... 150 3e-35 tr|Q84W33|Q84W33_ARATH Putative uncharacterized protein At1g3141... 148 1e-34 tr|Q66GJ0|Q66GJ0_ARATH At1g31410 OS=Arabidopsis thaliana GN=At1g... 148 1e-34 tr|A5BM19|A5BM19_VITVI Putative uncharacterized protein OS=Vitis... 146 4e-34 tr|Q9C868|Q9C868_ARATH Putative uncharacterized protein T8E3.6 O... 145 1e-33 tr|B7JYD0|B7JYD0_SYNP8 Periplasmic polyamine-binding protein OS=... 114 3e-24 tr|B4BWG3|B4BWG3_9CHRO Periplasmic polyamine-binding protein of ... 114 3e-24 tr|B4VU35|B4VU35_9CYAN Putative uncharacterized protein OS=Micro... 112 7e-24 tr|A8YFD0|A8YFD0_MICAE Genome sequencing data, contig C304 OS=Mi... 111 2e-23 tr|B0JRV2|B0JRV2_MICAN Periplasmic polyamine-binding protein OS=... 110 4e-23 tr|B1XNE5|B1XNE5_SYNP2 Periplasmic binding protein of ABC transp... 107 3e-22 tr|A0YUF4|A0YUF4_9CYAN Periplasmic polyamine-binding protein of ... 107 4e-22 tr|B4B063|B4B063_9CHRO Periplasmic polyamine-binding protein of ... 105 1e-21 tr|B5VUU3|B5VUU3_SPIMA Extracellular solute-binding protein fami... 103 3e-21 tr|Q4C6S9|Q4C6S9_CROWT Twin-arginine translocation pathway signa... 102 7e-21 tr|B7KEY8|B7KEY8_9CHRO Periplasmic polyamine-binding protein OS=... 102 7e-21 tr|Q110R7|Q110R7_TRIEI Periplasmic polyamine-binding protein of ... 102 1e-20 tr|B1WTZ7|B1WTZ7_CYAA5 Periplasmic polyamine-binding protein of ... 102 1e-20 tr|B0C8D9|B0C8D9_ACAM1 ABC transporter, periplasmic solute-bindi... 100 6e-20 tr|B2J152|B2J152_NOSP7 Extracellular solute-binding protein, fam... 99 1e-19 tr|A3IWZ1|A3IWZ1_9CHRO Periplasmic polyamine-binding protein of ... 97 3e-19 tr|Q8Z004|Q8Z004_ANASP Periplasmic polyamine-binding protein of ... 96 7e-19 tr|Q5N0Z8|Q5N0Z8_SYNP6 Periplasmic polyamine-binding protein of ... 96 1e-18 tr|Q31KX3|Q31KX3_SYNE7 Periplasmic polyamine-binding protein of ... 96 1e-18
>tr|A9S2G2|A9S2G2_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_123127 PE=4 SV=1 Length = 438
Score = 174 bits (440), Expect = 3e-42 Identities = 79/123 (64%), Positives = 100/123 (81%) Frame = -1
Query: 370 WQAFVRRDQYGDLTPEGLVWGVPYRWGSMVIAYKKDQFLKNNIPALEDWQDLWRPELKGQ 191 WQ F+RRD G + P+GLVWGVPYRWGS+V A+KKD+ +N I + DW+DL++P+L G+ Sbjct: 122 WQNFIRRDPEGIINPQGLVWGVPYRWGSLVFAFKKDKLERNGISPIRDWKDLFQPQLAGR 181
Query: 190 IAMVGSPRELVGAVLKSLGASYNAQDFDRDVKGGKEAVKQQFLALQKQVKVFDNVHYLKV 11 IAMV SPRE+VGAVLKSLGASYN DFD DV GG+EAVK++FLALQKQV++FD+ YLK Sbjct: 182 IAMVDSPREVVGAVLKSLGASYNTNDFDADVPGGREAVKERFLALQKQVRLFDDNDYLKA 241
Query: 10 FGS 2 + Sbjct: 242 MSA 244
>tr|B7ZYY2|B7ZYY2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 530
Score = 161 bits (408), Expect = 1e-38 Identities = 70/121 (57%), Positives = 95/121 (78%) Frame = -1
Query: 370 WQAFVRRDQYGDLTPEGLVWGVPYRWGSMVIAYKKDQFLKNNIPALEDWQDLWRPELKGQ 191 W+ + R+Q G+ P G +WGVPYRWG+MVIAYKKD+F ++N+ ++DW+DLWRPEL G+ Sbjct: 235 WKVHLCRNQNGEADPNGTIWGVPYRWGTMVIAYKKDKFKRHNLKPIQDWEDLWRPELAGR 294
Query: 190 IAMVGSPRELVGAVLKSLGASYNAQDFDRDVKGGKEAVKQQFLALQKQVKVFDNVHYLKV 11 I+MV SPRE++GAVLK LG+SYN D + DV GG+ AV F LQKQV++FD+++YLK Sbjct: 295 ISMVDSPREVIGAVLKHLGSSYNTVDMEMDVNGGRAAVLNSFTQLQKQVQLFDSMNYLKS 354
Query: 10 F 8 F Sbjct: 355 F 355
>tr|A7QVZ6|A7QVZ6_VITVI Chromosome chr2 scaffold_196, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007620001 PE=4 SV=1 Length = 538
Score = 154 bits (388), Expect = 3e-36 Identities = 66/119 (55%), Positives = 89/119 (74%) Frame = -1
Query: 370 WQAFVRRDQYGDLTPEGLVWGVPYRWGSMVIAYKKDQFLKNNIPALEDWQDLWRPELKGQ 191 W+ ++RR+ G+L EG +W PYRWGSMVIAYKK +F K+ + +EDW DLWRPEL G+ Sbjct: 238 WKVYLRRNSKGELDAEGKIWAAPYRWGSMVIAYKKSKFEKHKLAPIEDWADLWRPELAGR 297
Query: 190 IAMVGSPRELVGAVLKSLGASYNAQDFDRDVKGGKEAVKQQFLALQKQVKVFDNVHYLK 14 I+M+ SPRE+VGAVLK +GASYN + + V GG+ AV+Q + L KQV+ FD+ HY+K Sbjct: 298 ISMIDSPREVVGAVLKYMGASYNTDNIELQVNGGRNAVQQNLMLLAKQVRCFDSTHYIK 356
>tr|Q7XSS1|Q7XSS1_ORYSJ OSJNBa0041A02.11 protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=OSJNBa0041A02.11 PE=4 SV=2 Length = 422
Score = 150 bits (379), Expect = 3e-35 Identities = 63/122 (51%), Positives = 93/122 (76%) Frame = -1
Query: 370 WQAFVRRDQYGDLTPEGLVWGVPYRWGSMVIAYKKDQFLKNNIPALEDWQDLWRPELKGQ 191 W+ + R++ G++ P G +W VPYRWG++VIAYKK++F ++N+ ++DW DLWRPEL G+ Sbjct: 127 WKIHLCRNRNGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRHNLKPIQDWGDLWRPELAGK 186
Query: 190 IAMVGSPRELVGAVLKSLGASYNAQDFDRDVKGGKEAVKQQFLALQKQVKVFDNVHYLKV 11 I+MV SPRE++GAVLK LG+SYN D + ++ GG+E V + LQ QV++FD+ +YLK Sbjct: 187 ISMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQLQNQVQLFDSTNYLKS 246
Query: 10 FG 5 FG Sbjct: 247 FG 248
>tr|Q0JAF3|Q0JAF3_ORYSJ Os04g0602200 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os04g0602200 PE=4 SV=1 Length = 367
Score = 150 bits (379), Expect = 3e-35 Identities = 63/122 (51%), Positives = 93/122 (76%) Frame = -1
Query: 370 WQAFVRRDQYGDLTPEGLVWGVPYRWGSMVIAYKKDQFLKNNIPALEDWQDLWRPELKGQ 191 W+ + R++ G++ P G +W VPYRWG++VIAYKK++F ++N+ ++DW DLWRPEL G+ Sbjct: 72 WKIHLCRNRNGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRHNLKPIQDWGDLWRPELAGK 131
Query: 190 IAMVGSPRELVGAVLKSLGASYNAQDFDRDVKGGKEAVKQQFLALQKQVKVFDNVHYLKV 11 I+MV SPRE++GAVLK LG+SYN D + ++ GG+E V + LQ QV++FD+ +YLK Sbjct: 132 ISMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQLQNQVQLFDSTNYLKS 191
Query: 10 FG 5 FG Sbjct: 192 FG 193
>tr|Q01HT2|Q01HT2_ORYSA B0403H10-OSIGBa0105A11.16 protein OS=Oryza sativa GN=B0403H10-OSIGBa0105A11.16 PE=4 SV=1 Length = 537
Score = 150 bits (379), Expect = 3e-35 Identities = 63/122 (51%), Positives = 93/122 (76%) Frame = -1
Query: 370 WQAFVRRDQYGDLTPEGLVWGVPYRWGSMVIAYKKDQFLKNNIPALEDWQDLWRPELKGQ 191 W+ + R++ G++ P G +W VPYRWG++VIAYKK++F ++N+ ++DW DLWRPEL G+ Sbjct: 242 WKIHLCRNRNGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRHNLKPIQDWGDLWRPELAGK 301
Query: 190 IAMVGSPRELVGAVLKSLGASYNAQDFDRDVKGGKEAVKQQFLALQKQVKVFDNVHYLKV 11 I+MV SPRE++GAVLK LG+SYN D + ++ GG+E V + LQ QV++FD+ +YLK Sbjct: 302 ISMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQLQNQVQLFDSTNYLKS 361
Query: 10 FG 5 FG Sbjct: 362 FG 363
>tr|B8ATW8|B8ATW8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17268 PE=4 SV=1 Length = 537
Score = 150 bits (379), Expect = 3e-35 Identities = 63/122 (51%), Positives = 93/122 (76%) Frame = -1
Query: 370 WQAFVRRDQYGDLTPEGLVWGVPYRWGSMVIAYKKDQFLKNNIPALEDWQDLWRPELKGQ 191 W+ + R++ G++ P G +W VPYRWG++VIAYKK++F ++N+ ++DW DLWRPEL G+ Sbjct: 242 WKIHLCRNRNGEVDPNGSIWAVPYRWGTVVIAYKKNKFKRHNLKPIQDWGDLWRPELAGK 301
Query: 190 IAMVGSPRELVGAVLKSLGASYNAQDFDRDVKGGKEAVKQQFLALQKQVKVFDNVHYLKV 11 I+MV SPRE++GAVLK LG+SYN D + ++ GG+E V + LQ QV++FD+ +YLK Sbjct: 302 ISMVDSPREVIGAVLKHLGSSYNTNDMESEITGGRETVLESLTQLQNQVQLFDSTNYLKS 361
Query: 10 FG 5 FG Sbjct: 362 FG 363
>tr|Q84W33|Q84W33_ARATH Putative uncharacterized protein At1g31410 OS=Arabidopsis thaliana GN=At1g31410 PE=2 SV=1 Length = 524
Score = 148 bits (374), Expect = 1e-34 Identities = 66/121 (54%), Positives = 88/121 (72%) Frame = -1
Query: 370 WQAFVRRDQYGDLTPEGLVWGVPYRWGSMVIAYKKDQFLKNNIPALEDWQDLWRPELKGQ 191 W+ ++RR+ G+ P+G W VPYRWG+MVIAYKK +F + +EDW DLWRPEL G+ Sbjct: 216 WKIYLRRNYAGEKAPDGETWAVPYRWGTMVIAYKKSKFQNYKLAPIEDWADLWRPELAGR 275
Query: 190 IAMVGSPRELVGAVLKSLGASYNAQDFDRDVKGGKEAVKQQFLALQKQVKVFDNVHYLKV 11 IAMV SPRE+VGAVLK + ASYN D D V GG+ AV++ +L KQ+++FD+ +YLK Sbjct: 276 IAMVNSPREVVGAVLKYMRASYNTTDLDSQVPGGRLAVEENLASLMKQIRLFDSNNYLKA 335
Query: 10 F 8 F Sbjct: 336 F 336
>tr|Q66GJ0|Q66GJ0_ARATH At1g31410 OS=Arabidopsis thaliana GN=At1g31410 PE=2 SV=1 Length = 524
Score = 148 bits (373), Expect = 1e-34 Identities = 66/121 (54%), Positives = 88/121 (72%) Frame = -1
Query: 370 WQAFVRRDQYGDLTPEGLVWGVPYRWGSMVIAYKKDQFLKNNIPALEDWQDLWRPELKGQ 191 W+ ++RR+ G+ P+G W VPYRWG+MVIAYKK +F + +EDW DLWRPEL G+ Sbjct: 216 WKIYLRRNYAGEKAPDGETWAVPYRWGTMVIAYKKSKFQNYKLAPIEDWADLWRPELAGR 275
Query: 190 IAMVGSPRELVGAVLKSLGASYNAQDFDRDVKGGKEAVKQQFLALQKQVKVFDNVHYLKV 11 IAMV SPRE+VGAVLK + ASYN D D V GG+ AV++ +L KQ+++FD+ +YLK Sbjct: 276 IAMVNSPREVVGAVLKYMRASYNTTDLDSQVPGGRLAVEKNLASLMKQIRLFDSNNYLKA 335
Query: 10 F 8 F Sbjct: 336 F 336
>tr|A5BM19|A5BM19_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021806 PE=4 SV=1 Length = 875
Score = 146 bits (369), Expect = 4e-34 Identities = 64/114 (56%), Positives = 85/114 (74%) Frame = -1
Query: 355 RRDQYGDLTPEGLVWGVPYRWGSMVIAYKKDQFLKNNIPALEDWQDLWRPELKGQIAMVG 176 +R+ G+L EG +W PYRWGSMVIAYKK +F K+ + +EDW DLWRPEL G+I+M+ Sbjct: 580 KRNSKGELDAEGKIWAAPYRWGSMVIAYKKSKFEKHKLAPIEDWADLWRPELAGRISMID 639
Query: 175 SPRELVGAVLKSLGASYNAQDFDRDVKGGKEAVKQQFLALQKQVKVFDNVHYLK 14 SPRE+VGAVLK +GASYN + + V GG+ AV+Q + L KQV+ FD+ HY+K Sbjct: 640 SPREVVGAVLKYMGASYNTDNIELQVNGGRNAVQQNLMLLAKQVRCFDSTHYIK 693
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