BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916796|Adiantum capillus-veneris mRNA, clone:
YMU001_000091_G01.
         (357 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q07162|PRTG_ERWCH Secreted protease G OS=Erwinia chrysanthemi...    32   0.77 
sp|A6U5H7|TRMB_SINMW tRNA (guanine-N(7)-)-methyltransferase OS=S...    30   2.9  
sp|Q2KD95|TRMB_RHIEC tRNA (guanine-N(7)-)-methyltransferase OS=R...    30   2.9  
sp|Q1MMC3|TRMB_RHIL3 tRNA (guanine-N(7)-)-methyltransferase OS=R...    29   6.5  
sp|Q7LKZ5|FAM50_SCHPO FAM50 family protein C1020.12c OS=Schizosa...    29   6.5  
sp|Q6YQD6|DNLJ_ONYPE DNA ligase OS=Onion yellows phytoplasma GN=...    29   6.5  
sp|Q6CTN7|MAK5_KLULA ATP-dependent RNA helicase MAK5 OS=Kluyvero...    29   8.5  

>sp|Q07162|PRTG_ERWCH Secreted protease G OS=Erwinia chrysanthemi
           GN=prtG PE=1 SV=1
          Length = 475

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = -3

Query: 328 SGHDIVVWSIADK---FGLHRDILFGCERLTMQGSADLPTHGVG*DMF 194
           SGHD++V +++D     G   D+L+G       G AD+ T G G D+F
Sbjct: 343 SGHDVIVGNLSDNRIDGGAGNDVLYG------DGGADILTGGAGKDIF 384


>sp|A6U5H7|TRMB_SINMW tRNA (guanine-N(7)-)-methyltransferase
           OS=Sinorhizobium medicae (strain WSM419) GN=trmB PE=3
           SV=1
          Length = 232

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +1

Query: 265 IVCLYAD-QTYQRWTKQRCRDHSVMQWSPASS 357
           + C  +D  +Y  WT   CRDH+  +W+ A +
Sbjct: 167 VFCFASDIDSYINWTLIHCRDHAAFEWTAAGA 198


>sp|Q2KD95|TRMB_RHIEC tRNA (guanine-N(7)-)-methyltransferase
           OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=trmB
           PE=3 SV=1
          Length = 230

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +1

Query: 265 IVCLYAD-QTYQRWTKQRCRDHSVMQW 342
           + C  +D  TY  WT  +CRDHS   W
Sbjct: 165 LFCFASDIDTYVNWTLLKCRDHSGFDW 191


>sp|Q1MMC3|TRMB_RHIL3 tRNA (guanine-N(7)-)-methyltransferase
           OS=Rhizobium leguminosarum bv. viciae (strain 3841)
           GN=trmB PE=3 SV=1
          Length = 233

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +1

Query: 265 IVCLYAD-QTYQRWTKQRCRDHSVMQW 342
           + C  +D  TY  WT  +CRDH   +W
Sbjct: 168 LFCFASDIDTYVNWTLIKCRDHGGFEW 194


>sp|Q7LKZ5|FAM50_SCHPO FAM50 family protein C1020.12c
           OS=Schizosaccharomyces pombe GN=SPCC1020.12c PE=3 SV=2
          Length = 288

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 8   PCPHWQTSMSRQPHEVEYKAVDPQMA 85
           PC HW+   SR+ + +E  A DP  A
Sbjct: 257 PCVHWEVFDSRKDYSLEKHATDPNAA 282


>sp|Q6YQD6|DNLJ_ONYPE DNA ligase OS=Onion yellows phytoplasma
           GN=ligA PE=3 SV=1
          Length = 671

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 11  CPHWQTSMSRQPHEVEYKAVDPQMAEEE 94
           CP  QT + +QP EV+Y  ++P   E++
Sbjct: 403 CPACQTILEKQPGEVDYFCLNPNCREQK 430


>sp|Q6CTN7|MAK5_KLULA ATP-dependent RNA helicase MAK5
           OS=Kluyveromyces lactis GN=MAK5 PE=3 SV=1
          Length = 796

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +2

Query: 134 KPTLYRCKQYATKASSMTSIKHILPYTMSRQISRALHRQSLASK 265
           KPT+      A +   ++ IKH+L Y + R     +HR    ++
Sbjct: 568 KPTILIASDVAARGLDISGIKHVLHYHLPRSADVYIHRSGRTAR 611

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916796|Adiantum capillus-veneris mRNA, clone:
YMU001_000091_G01.
         (357 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******