BP916823 |
Clone id |
YMU001_000092_B05 |
Library |
YMU01 |
Length |
363 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000092_B05. |
Accession |
BP916823 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2139Contig1 |
Sequence |
TGGAGGATTGATTGCATCTGCAACGGAAGGTCGTCTCGATGTTGAAGCTCTTCAAAGGTT TTTCCGTGATCTAATAAGAAGAAGATATTTTGGAGAAGAAAATGTAAATTCTCCTCTGCC AGCATGGACCAGTCCATCAAGAAATATAAGCCCTTACCACTCTAGTGGAGGGTCTTTGCA CGAGGATGACTTTGATAATAGCTATACAAGTGTAAATGGACAAGCGGCTCGATATAATGC GCCGGTTCCTGCACAAGCGACTCTTCTGCCACCCCCATTTTCTTATCCTCAGCAACCTCT TGGCACAACTGAGATGCACCTAACGGCAAGATCACACTCAGCAGCCAAGTCCAGCTCTTC TTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9C5J9 |
Definition |
sp|Q9C5J9|Y5483_ARATH Uncharacterized GTP-binding protein At5g64813 OS=Arabidopsis thaliana |
Align length |
112 |
Score (bit) |
78.2 |
E-value |
1.0e-14 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5AXG5 |
Definition |
tr|A5AXG5|A5AXG5_VITVI Putative uncharacterized protein (Chromosome chr7 scaffold_20, whole genome shotgun sequence) OS=Vitis vinifera |
Align length |
106 |
Score (bit) |
85.1 |
E-value |
2.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916823|Adiantum capillus-veneris mRNA, clone: YMU001_000092_B05. (363 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5AXG5|A5AXG5_VITVI Putative uncharacterized protein (Chromos... 85 2e-15 tr|A7QRM5|A7QRM5_VITVI Chromosome undetermined scaffold_151, who... 72 1e-11 tr|B4FHR5|B4FHR5_MAIZE Putative uncharacterized protein OS=Zea m... 70 4e-11 tr|Q948D2|Q948D2_ORYSJ Putative GTP-BINDING PROTEIN YPTV3 (Putat... 65 1e-09 tr|Q33B74|Q33B74_ORYSJ Os10g0135200 protein OS=Oryza sativa subs... 65 1e-09 tr|Q10A60|Q10A60_ORYSJ GTP-binding protein, putative, expressed ... 65 1e-09 tr|B8BFM5|B8BFM5_ORYSI Putative uncharacterized protein OS=Oryza... 65 1e-09 tr|B4FJG7|B4FJG7_MAIZE Putative uncharacterized protein OS=Zea m... 63 8e-09 tr|B6TV03|B6TV03_MAIZE RAB, member of RAS oncogene family-like 3... 61 2e-08 tr|Q9FIB5|Q9FIB5_ARATH Arabidopsis thaliana genomic DNA, chromos... 60 5e-08 tr|Q10P96|Q10P96_ORYSJ Os03g0242200 protein OS=Oryza sativa subs... 54 3e-06 tr|B8AJZ9|B8AJZ9_ORYSI Putative uncharacterized protein OS=Oryza... 54 3e-06 tr|A3AFZ1|A3AFZ1_ORYSJ Putative uncharacterized protein OS=Oryza... 54 3e-06 tr|B7U9V4|B7U9V4_CARAS AT5G09910-like protein OS=Cardaminopsis a... 42 0.020 tr|A4S2C9|A4S2C9_OSTLU Predicted protein (Fragment) OS=Ostreococ... 42 0.020 tr|B8AF51|B8AF51_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.17 tr|Q6K9X4|Q6K9X4_ORYSJ Os02g0823300 protein OS=Oryza sativa subs... 37 0.38 tr|A3ACU5|A3ACU5_ORYSJ Putative uncharacterized protein OS=Oryza... 37 0.38 tr|B1I0X8|B1I0X8_DESAP Triosephosphate isomerase OS=Desulforudis... 35 1.9 tr|B6HLL0|B6HLL0_PENCH Pc21g08160 protein OS=Penicillium chrysog... 35 1.9 tr|A9NKB6|A9NKB6_PICSI Putative uncharacterized protein OS=Picea... 34 3.2 tr|Q86JN5|Q86JN5_DICDI Similar to Dictyostelium discoideum (Slim... 34 3.2 tr|B7LFA9|B7LFA9_ECOLX Curved DNA-binding protein, DnaJ homologu... 34 4.2 tr|B3HD55|B3HD55_ECOLX Curved DNA-binding protein OS=Escherichia... 34 4.2 tr|B0ESE7|B0ESE7_ENTDI Stromal membrane-associated protein, puta... 34 4.2 tr|Q0DY68|Q0DY68_ORYSJ Os02g0712400 protein (Fragment) OS=Oryza ... 33 5.5 tr|A3AAN0|A3AAN0_ORYSJ Putative uncharacterized protein OS=Oryza... 33 5.5 tr|A2Z4N0|A2Z4N0_ORYSI Putative uncharacterized protein OS=Oryza... 33 5.5 tr|A2Z4M2|A2Z4M2_ORYSI Putative uncharacterized protein OS=Oryza... 33 5.5 tr|Q68DX9|Q68DX9_HUMAN Putative uncharacterized protein DKFZp686... 33 5.5
>tr|A5AXG5|A5AXG5_VITVI Putative uncharacterized protein (Chromosome chr7 scaffold_20, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00019381001 PE=4 SV=1 Length = 336
Score = 85.1 bits (209), Expect = 2e-15 Identities = 48/106 (45%), Positives = 65/106 (61%), Gaps = 2/106 (1%) Frame = +2
Query: 2 GGLIASATEGRLDVEALQRFFRDLIRRRYFGEENVNSPLPAWTSPSRNISPYHSSGGSLH 181 GG++A+A E R+D EA+ +FFR LIRRRYF +E + +P P SP + P +G +L Sbjct: 207 GGILAAAKEARVDKEAVMKFFRLLIRRRYFSDE-LPAPSPWSISPVQ--GPIQRAGDNLS 263
Query: 182 EDDFDNSYTSVNGQAARYNA--PVPAQATLLPPPFSYPQQPLGTTE 313 ED+ TS+ G +YN P+PAQ L PPP YPQQP+ E Sbjct: 264 EDNQFYKNTSLGGDPYKYNVLPPLPAQRNLTPPPTLYPQQPVSVAE 309
>tr|A7QRM5|A7QRM5_VITVI Chromosome undetermined scaffold_151, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00005416001 PE=4 SV=1 Length = 335
Score = 72.4 bits (176), Expect = 1e-11 Identities = 44/106 (41%), Positives = 65/106 (61%), Gaps = 2/106 (1%) Frame = +2
Query: 2 GGLIASATEGRLDVEALQRFFRDLIRRRYFGEENVNSPLPAWTSPSRNISPYHSSGGSLH 181 GGLIA+A E R D EA+++FF LIRRRYF E + +P P +SP +P+ S +L Sbjct: 207 GGLIAAAKEARFDKEAVKKFFLMLIRRRYFSNE-LPAPNPWSSSPFEGPAPH--SSNNLS 263
Query: 182 EDDFDNSYTSVNGQAARYN--APVPAQATLLPPPFSYPQQPLGTTE 313 +DD + TS++G +YN P+PA+ +PP PQQP+ ++ Sbjct: 264 DDDVFHMNTSLSGDPYKYNILPPLPAR-NYMPPSAQRPQQPVSISD 308
>tr|B4FHR5|B4FHR5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 339
Score = 70.5 bits (171), Expect = 4e-11 Identities = 45/105 (42%), Positives = 62/105 (59%), Gaps = 3/105 (2%) Frame = +2
Query: 5 GLIASATEGRLDVEALQRFFRDLIRRRYFGEENVNSPLPAWTSPSRN-ISPYHSSGGSLH 181 GL+ +A E R D EAL +FFR LIRRRYF E + +P P +P + I P +++ Sbjct: 212 GLLTAAKEARYDKEALIKFFRMLIRRRYFSNE-LPAPSPWSLTPREDTILPVE----TVN 266
Query: 182 EDDFDNSYTSVNGQAARYN--APVPAQATLLPPPFSYPQQPLGTT 310 +DD S GQ+ +YN P+PAQ L PPP YPQQP+ ++ Sbjct: 267 DDDMFQR-KSYGGQSYKYNGVTPLPAQRNLTPPPTLYPQQPMSSS 310
>tr|Q948D2|Q948D2_ORYSJ Putative GTP-BINDING PROTEIN YPTV3 (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=OSJNBa0013J21.21 PE=4 SV=1 Length = 354
Score = 65.5 bits (158), Expect = 1e-09 Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 3/105 (2%) Frame = +2
Query: 5 GLIASATEGRLDVEALQRFFRDLIRRRYFGEENVNSPLPAWTSPSRN-ISPYHSSGGSLH 181 GL+ +A R D EAL +FFR LIRRRYF E + +P P +P + I P ++ Sbjct: 227 GLLTAAKVARYDKEALVKFFRMLIRRRYFSNE-LPAPSPWSLTPREDTILPVETT----- 280
Query: 182 EDDFDNSYTSVNGQAARYN--APVPAQATLLPPPFSYPQQPLGTT 310 DD S GQ+ +Y+ P+PAQ L PPP YPQQP+ ++ Sbjct: 281 NDDDLFQRKSYAGQSYKYSGVTPLPAQRNLTPPPTLYPQQPMSSS 325
>tr|Q33B74|Q33B74_ORYSJ Os10g0135200 protein OS=Oryza sativa subsp. japonica GN=Os10g0135200 PE=2 SV=1 Length = 343
Score = 65.5 bits (158), Expect = 1e-09 Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 3/105 (2%) Frame = +2
Query: 5 GLIASATEGRLDVEALQRFFRDLIRRRYFGEENVNSPLPAWTSPSRN-ISPYHSSGGSLH 181 GL+ +A R D EAL +FFR LIRRRYF E + +P P +P + I P ++ Sbjct: 216 GLLTAAKVARYDKEALVKFFRMLIRRRYFSNE-LPAPSPWSLTPREDTILPVETT----- 269
Query: 182 EDDFDNSYTSVNGQAARYN--APVPAQATLLPPPFSYPQQPLGTT 310 DD S GQ+ +Y+ P+PAQ L PPP YPQQP+ ++ Sbjct: 270 NDDDLFQRKSYAGQSYKYSGVTPLPAQRNLTPPPTLYPQQPMSSS 314
>tr|Q10A60|Q10A60_ORYSJ GTP-binding protein, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os10g04580 PE=4 SV=1 Length = 269
Score = 65.5 bits (158), Expect = 1e-09 Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 3/105 (2%) Frame = +2
Query: 5 GLIASATEGRLDVEALQRFFRDLIRRRYFGEENVNSPLPAWTSPSRN-ISPYHSSGGSLH 181 GL+ +A R D EAL +FFR LIRRRYF E + +P P +P + I P ++ Sbjct: 142 GLLTAAKVARYDKEALVKFFRMLIRRRYFSNE-LPAPSPWSLTPREDTILPVETT----- 195
Query: 182 EDDFDNSYTSVNGQAARYN--APVPAQATLLPPPFSYPQQPLGTT 310 DD S GQ+ +Y+ P+PAQ L PPP YPQQP+ ++ Sbjct: 196 NDDDLFQRKSYAGQSYKYSGVTPLPAQRNLTPPPTLYPQQPMSSS 240
>tr|B8BFM5|B8BFM5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32675 PE=4 SV=1 Length = 343
Score = 65.5 bits (158), Expect = 1e-09 Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 3/105 (2%) Frame = +2
Query: 5 GLIASATEGRLDVEALQRFFRDLIRRRYFGEENVNSPLPAWTSPSRN-ISPYHSSGGSLH 181 GL+ +A R D EAL +FFR LIRRRYF E + +P P +P + I P ++ Sbjct: 216 GLLTAAKVARYDKEALVKFFRMLIRRRYFSNE-LPAPSPWSLTPREDTILPVETT----- 269
Query: 182 EDDFDNSYTSVNGQAARYN--APVPAQATLLPPPFSYPQQPLGTT 310 DD S GQ+ +Y+ P+PAQ L PPP YPQQP+ ++ Sbjct: 270 NDDDLFQRKSYAGQSYKYSGVTPLPAQRNLTPPPTLYPQQPMSSS 314
>tr|B4FJG7|B4FJG7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 339
Score = 62.8 bits (151), Expect = 8e-09 Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 5/104 (4%) Frame = +2
Query: 5 GLIASATEGRLDVEALQRFFRDLIRRRYFGEENVNSPLPA-WTSPSR--NISPYHSSGGS 175 GL+++A + R D EA+ +FFR LIRRRYF E P P+ W+ R I P + G Sbjct: 211 GLVSAAKQARYDKEAVIKFFRLLIRRRYFSNE---PPAPSPWSLAPREDTILPMETLGDG 267
Query: 176 LHEDDFDNSYTSVNGQAARYN--APVPAQATLLPPPFSYPQQPL 301 D F S++G+ YN P+PAQ L PPP PQQP+ Sbjct: 268 --ADSFQRK--SLSGEGFLYNGLVPLPAQRNLTPPPTLNPQQPV 307
>tr|B6TV03|B6TV03_MAIZE RAB, member of RAS oncogene family-like 3 OS=Zea mays PE=2 SV=1 Length = 339
Score = 61.2 bits (147), Expect = 2e-08 Identities = 42/104 (40%), Positives = 56/104 (53%), Gaps = 5/104 (4%) Frame = +2
Query: 5 GLIASATEGRLDVEALQRFFRDLIRRRYFGEENVNSPLPA-WTSPSR--NISPYHSSGGS 175 GL+++A + R D E + +FFR LIRRRYF E P P+ W+ R I P + G Sbjct: 211 GLVSAAKQARYDKEVVIKFFRLLIRRRYFSNE---PPAPSPWSLAPREDTILPMETLGDG 267
Query: 176 LHEDDFDNSYTSVNGQAARYN--APVPAQATLLPPPFSYPQQPL 301 D F S++G+ YN P+PAQ L PPP PQQP+ Sbjct: 268 --ADSFQRK--SLSGEGFLYNGLVPLPAQRNLTPPPTLNPQQPV 307
>tr|Q9FIB5|Q9FIB5_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYH9 OS=Arabidopsis thaliana GN=At5g09910 PE=4 SV=1 Length = 431
Score = 60.1 bits (144), Expect = 5e-08 Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 3/101 (2%) Frame = +2
Query: 5 GLIASATEGRLDVEALQRFFRDLIRRRYFGEENVNSPLPAWT---SPSRNISPYHSSGGS 175 GLI +A E R D EAL + F LIRRRYF +E + SP AW+ +PS+ + G+ Sbjct: 195 GLIMAAKEARYDKEALTKIFHMLIRRRYFSDE-LPSPSSAWSLSHAPSQRLDE-----GT 248
Query: 176 LHEDDFDNSYTSVNGQAARYNAPVPAQATLLPPPFSYPQQP 298 ED F + G A +YN +P Q L+ P YPQQP Sbjct: 249 SDEDQFYKRTSLREGDAYKYNT-LP-QHNLMQSPTLYPQQP 287
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