BP916827 |
Clone id |
YMU001_000092_B11 |
Library |
YMU01 |
Length |
465 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000092_B11. |
Accession |
BP916827 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GACCCTCTGCAAGAACTAGCTGAGCAGCCTTATAATGCTTAATAGCTTCTCCTGAAAGCC CATTTTCTTCTGCCCACAGGGCTTTGTCAATTTCTGCTTTTGCCAGACTAAAATACCCTT TAAGCTTCTGTTCTGCTCGTTGCTTCCCTGTATGATAAGGTACCAAGGAGTTTGTAGGGT CCTGCCCTTCATTCATCCACGTTGCGTTCCTGTTAGTCTCCTCGGCAGAAGAAAAAACCA AAGAAGAGAGCTTCTCAAGAGCCCACATCAAAAAGCTGAGAAAAGACACAGAGATATCTG CACTGATGTCTTTCCAACTAGCCAGCATACTCTTCTTGAAGTCTGCTCAGATCCTATGCT CTACTCCATCGCAACGTCGAGAGGATGCAGAAGACAATCTTTTATCTCTCCGTGCTGCTT CAGACGCGCTGCATCCTATGATCTCTCCTGAGTTGACCTGATGCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9C6H4 |
Definition |
sp|Q9C6H4|SINL1_ARATH E3 ubiquitin-protein ligase SINA-like 1 OS=Arabidopsis thaliana |
Align length |
109 |
Score (bit) |
37.4 |
E-value |
0.032 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q944N4 |
Definition |
tr|Q944N4|Q944N4_TOBAC Tobacco mosaic virus helicase domain-binding protein (Fragment) OS=Nicotiana tabacum |
Align length |
97 |
Score (bit) |
70.1 |
E-value |
5.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916827|Adiantum capillus-veneris mRNA, clone: YMU001_000092_B11. (465 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q944N4|Q944N4_TOBAC Tobacco mosaic virus helicase domain-bind... 70 5e-11 tr|A5BIC4|A5BIC4_VITVI Putative uncharacterized protein OS=Vitis... 57 3e-07 tr|A9RII8|A9RII8_PHYPA Predicted protein OS=Physcomitrella paten... 56 1e-06 tr|A7PY13|A7PY13_VITVI Chromosome chr15 scaffold_37, whole genom... 55 2e-06 tr|A5BB69|A5BB69_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-06 tr|B4FVB5|B4FVB5_MAIZE Putative uncharacterized protein OS=Zea m... 55 2e-06 tr|Q658G8|Q658G8_ORYSJ Os06g0130000 protein OS=Oryza sativa subs... 53 7e-06 tr|B8B1Z6|B8B1Z6_ORYSI Putative uncharacterized protein OS=Oryza... 53 7e-06 tr|Q0WMJ4|Q0WMJ4_ARATH Putative uncharacterized protein At2g4550... 52 1e-05 tr|O64630|O64630_ARATH Putative uncharacterized protein At2g4550... 52 1e-05 tr|A8MRR2|A8MRR2_ARATH Uncharacterized protein At2g45500.1 OS=Ar... 52 1e-05 tr|A9NL44|A9NL44_PICSI Putative uncharacterized protein OS=Picea... 35 1.4 tr|A4ARD6|A4ARD6_9FLAO Cystathionine beta-lyase OS=Flavobacteria... 34 4.1 tr|Q9V1C8|Q9V1C8_PYRAB GTP-binding protein OS=Pyrococcus abyssi ... 34 4.1 tr|Q8U054|Q8U054_PYRFU GTP-binding protein, gtp1/obg family OS=P... 34 4.1 tr|O59329|O59329_PYRHO 387aa long hypothetical developmentally r... 34 4.1 tr|B3ERR1|B3ERR1_AMOA5 Putative uncharacterized protein OS=Amoeb... 33 5.4 tr|Q55D86|Q55D86_DICDI Putative uncharacterized protein OS=Dicty... 33 5.4 tr|Q5M3E0|Q5M3E0_STRT2 Polar amino acid ABC uptake transporter s... 33 7.0 tr|A0N0T5|A0N0T5_9RHOO Transposase (Fragment) OS=Azoarcus anaero... 33 7.0 tr|Q6CRY5|Q6CRY5_KLULA KLLA0D05467p OS=Kluyveromyces lactis GN=K... 33 7.0 tr|Q5CW69|Q5CW69_CRYPV PP2C like protein phosphatase OS=Cryptosp... 33 9.1
>tr|Q944N4|Q944N4_TOBAC Tobacco mosaic virus helicase domain-binding protein (Fragment) OS=Nicotiana tabacum PE=2 SV=1 Length = 537
Score = 70.1 bits (170), Expect = 5e-11 Identities = 45/97 (46%), Positives = 57/97 (58%), Gaps = 4/97 (4%) Frame = -3
Query: 280 LSFLMWALEKLSSLVF----SSAEETNRNATWMNEGQDPTNSLVPYHTGKQRAEQKLKGY 113 +SFL E LSS+ SS+ + +RN + D TG +RA KLKGY Sbjct: 37 MSFLKDLAETLSSIFSDTPSSSSPQNDRNLNSADRTMDGVA------TGNERAAYKLKGY 90
Query: 112 FSLAKAEIDKALWAEENGLSGEAIKHYKAAQLVLAEG 2 F LAK EIDKA+ AEE GL+ +AI HY+ AQ +LAEG Sbjct: 91 FDLAKEEIDKAVRAEEWGLADDAISHYQNAQKILAEG 127
>tr|A5BIC4|A5BIC4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024819 PE=4 SV=1 Length = 125
Score = 57.4 bits (137), Expect = 3e-07 Identities = 36/95 (37%), Positives = 48/95 (50%) Frame = -3
Query: 289 VSFLSFLMWALEKLSSLVFSSAEETNRNATWMNEGQDPTNSLVPYHTGKQRAEQKLKGYF 110 VS +SFL ++ L S+ S ++ + +V QR KLKGY+ Sbjct: 18 VSVMSFLKGIIDSLGSIFSDSTSPDEAQSSPNFSDNRAMDGVVGTGVSNQRIAYKLKGYY 77
Query: 109 SLAKAEIDKALWAEENGLSGEAIKHYKAAQLVLAE 5 LA EI KA+ AEE GL +AI HYK AQ +L E Sbjct: 78 DLATEEIAKAVRAEEWGLVDDAIVHYKNAQRILIE 112
>tr|A9RII8|A9RII8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_114828 PE=4 SV=1 Length = 465
Score = 55.8 bits (133), Expect = 1e-06 Identities = 30/64 (46%), Positives = 39/64 (60%) Frame = -3
Query: 193 NEGQDPTNSLVPYHTGKQRAEQKLKGYFSLAKAEIDKALWAEENGLSGEAIKHYKAAQLV 14 N +SLV + +R +KLKGYFSL K EIDKA+ A+E GL +A+ HY A + Sbjct: 3 NRPSSTPSSLVLGNVDGERVVEKLKGYFSLGKGEIDKAVRADEWGLLEDALLHYSNANRI 62
Query: 13 LAEG 2 L EG Sbjct: 63 LLEG 66
>tr|A7PY13|A7PY13_VITVI Chromosome chr15 scaffold_37, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026260001 PE=3 SV=1 Length = 459
Score = 55.1 bits (131), Expect = 2e-06 Identities = 34/92 (36%), Positives = 46/92 (50%) Frame = -3
Query: 280 LSFLMWALEKLSSLVFSSAEETNRNATWMNEGQDPTNSLVPYHTGKQRAEQKLKGYFSLA 101 +SFL ++ L S+ S ++ + +V QR KLKGY+ LA Sbjct: 1 MSFLKGIIDSLGSIFSDSTSPDEAQSSPNFSDNGAMDGVVGTGVSNQRIAYKLKGYYDLA 60
Query: 100 KAEIDKALWAEENGLSGEAIKHYKAAQLVLAE 5 EI KA+ AEE GL +AI HYK AQ +L E Sbjct: 61 TEEIAKAVRAEEWGLVDDAIVHYKNAQRILIE 92
>tr|A5BB69|A5BB69_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011429 PE=3 SV=1 Length = 470
Score = 55.1 bits (131), Expect = 2e-06 Identities = 34/92 (36%), Positives = 46/92 (50%) Frame = -3
Query: 280 LSFLMWALEKLSSLVFSSAEETNRNATWMNEGQDPTNSLVPYHTGKQRAEQKLKGYFSLA 101 +SFL ++ L S+ S ++ + +V QR KLKGY+ LA Sbjct: 1 MSFLKGIIDSLGSIFSDSTSPDEAQSSPNFSDNGAMDGVVGTGVSNQRIAYKLKGYYDLA 60
Query: 100 KAEIDKALWAEENGLSGEAIKHYKAAQLVLAE 5 EI KA+ AEE GL +AI HYK AQ +L E Sbjct: 61 TEEIAKAVRAEEWGLVDDAIVHYKNAQRILIE 92
>tr|B4FVB5|B4FVB5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 490
Score = 54.7 bits (130), Expect = 2e-06 Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Frame = -3
Query: 280 LSFLMWALEKLSSLVFSSAEETNRNATWMNE-GQDPTNSLVPYHTGKQRAEQKLKGYFSL 104 +SFL + SSL+FSS A M+ G P+ + V +R KL+GYF L Sbjct: 1 MSFLRSLADSFSSLLFSSGG----GAVSMDAAGAAPSPAAVV----GERVAVKLRGYFDL 52
Query: 103 AKAEIDKALWAEENGLSGEAIKHYKAAQLVLAE 5 AK EIDKA+ AEE GL EA HY+ A V+ E Sbjct: 53 AKEEIDKAVRAEEWGLPDEATAHYRNAMRVMLE 85
>tr|Q658G8|Q658G8_ORYSJ Os06g0130000 protein OS=Oryza sativa subsp. japonica GN=P0538C01.26-1 PE=2 SV=1 Length = 487
Score = 53.1 bits (126), Expect = 7e-06 Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 3/95 (3%) Frame = -3
Query: 280 LSFLMWALEKLSSLVFSSAEETNRNATWMNEGQDPTNSLV---PYHTGKQRAEQKLKGYF 110 +SFL + LSSL++S+A + G D + P +R KL+GYF Sbjct: 1 MSFLRALADSLSSLLYSAAAK----------GGDMDGAAAAPSPAAVVGERVAVKLRGYF 50
Query: 109 SLAKAEIDKALWAEENGLSGEAIKHYKAAQLVLAE 5 LAK EIDKA+ AEE GL +A HY+ A V+ E Sbjct: 51 ELAKEEIDKAVRAEEWGLPDDAAAHYRNALRVMLE 85
>tr|B8B1Z6|B8B1Z6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21482 PE=4 SV=1 Length = 487
Score = 53.1 bits (126), Expect = 7e-06 Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 3/95 (3%) Frame = -3
Query: 280 LSFLMWALEKLSSLVFSSAEETNRNATWMNEGQDPTNSLV---PYHTGKQRAEQKLKGYF 110 +SFL + LSSL++S+A + G D + P +R KL+GYF Sbjct: 1 MSFLRALADSLSSLLYSAAAK----------GGDMDGAAAAPSPAAVVGERVAVKLRGYF 50
Query: 109 SLAKAEIDKALWAEENGLSGEAIKHYKAAQLVLAE 5 LAK EIDKA+ AEE GL +A HY+ A V+ E Sbjct: 51 ELAKEEIDKAVRAEEWGLPDDAAAHYRNALRVMLE 85
>tr|Q0WMJ4|Q0WMJ4_ARATH Putative uncharacterized protein At2g45500 OS=Arabidopsis thaliana GN=At2g45500 PE=2 SV=1 Length = 487
Score = 52.0 bits (123), Expect = 1e-05 Identities = 30/92 (32%), Positives = 51/92 (55%) Frame = -3
Query: 280 LSFLMWALEKLSSLVFSSAEETNRNATWMNEGQDPTNSLVPYHTGKQRAEQKLKGYFSLA 101 +SFL ++ SS++ +++ + + + + + N + +R KLKGYF LA Sbjct: 1 MSFLRGIIDSFSSILNEESKK-DPSVSSSSTSSESMNGIDGVPVTNERIAYKLKGYFDLA 59
Query: 100 KAEIDKALWAEENGLSGEAIKHYKAAQLVLAE 5 K EI K + AEE GL +A+ HY+ AQ ++ E Sbjct: 60 KEEIAKGVRAEEWGLHDDALLHYRNAQRIMNE 91
>tr|O64630|O64630_ARATH Putative uncharacterized protein At2g45500 OS=Arabidopsis thaliana GN=At2g45500 PE=2 SV=1 Length = 481
Score = 52.0 bits (123), Expect = 1e-05 Identities = 30/92 (32%), Positives = 51/92 (55%) Frame = -3
Query: 280 LSFLMWALEKLSSLVFSSAEETNRNATWMNEGQDPTNSLVPYHTGKQRAEQKLKGYFSLA 101 +SFL ++ SS++ +++ + + + + + N + +R KLKGYF LA Sbjct: 1 MSFLRGIIDSFSSILNEESKK-DPSVSSSSTSSESMNGIDGVPVTNERIAYKLKGYFDLA 59
Query: 100 KAEIDKALWAEENGLSGEAIKHYKAAQLVLAE 5 K EI K + AEE GL +A+ HY+ AQ ++ E Sbjct: 60 KEEIAKGVRAEEWGLHDDALLHYRNAQRIMNE 91
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