BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916830|Adiantum capillus-veneris mRNA, clone:
YMU001_000092_C02.
         (385 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q00GL7|PSBU_KARBR Photosystem II 12 kDa extrinsic protein, ch...    30   3.8  
sp|P33246|VP40_NPVBM Structural glycoprotein p40 OS=Bombyx mori ...    29   8.2  
sp|O27545|SEPS_METTH O-phosphoseryl-tRNA(Cys) synthetase OS=Meth...    29   8.4  

>sp|Q00GL7|PSBU_KARBR Photosystem II 12 kDa extrinsic protein,
           chloroplastic OS=Karenia brevis GN=psbU PE=2 SV=1
          Length = 159

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 241 ACLPCLACQALFLPQGMSLRKPHHHFRHPLLNLQASNML 357
           ACL C+   A F P  + + KP H  + P+++  A   L
Sbjct: 9   ACLACMGLAAAFSPATLGVNKPSHRQQAPVMSQVARREL 47


>sp|P33246|VP40_NPVBM Structural glycoprotein p40 OS=Bombyx mori
           nuclear polyhedrosis virus GN=P40 PE=2 SV=1
          Length = 348

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
 Frame = +3

Query: 114 RSTCLKQN-INVHHVQQCESENTRTHHMLKQVNFSMPSNFSKESLPSMSCL--SSFV 275
           R  C+  N INV+ V++ ESE T   H+++ +   +    + ESLPS S +  +SFV
Sbjct: 116 RDMCIDTNPINVNVVKRFESEETMIRHLIR-LQKELGQGNAAESLPSDSNIFQASFV 171


>sp|O27545|SEPS_METTH O-phosphoseryl-tRNA(Cys) synthetase
           OS=Methanobacterium thermoautotrophicum GN=sepS PE=3
           SV=1
          Length = 532

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 274 FLPQGMSLRKPHHHFRHPLLNLQ 342
           +L  G SLRKPHH  ++P L  +
Sbjct: 18  WLESGKSLRKPHHDMQYPRLRFE 40

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916830|Adiantum capillus-veneris mRNA, clone:
YMU001_000092_C02.
         (385 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2BIH5|Q2BIH5_9GAMM Putative uncharacterized protein OS=Neptu...    33   7.2  

>tr|Q2BIH5|Q2BIH5_9GAMM Putative uncharacterized protein
           OS=Neptuniibacter caesariensis GN=MED92_02504 PE=4 SV=1
          Length = 313

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = -1

Query: 382 FVVSGKHN-EAYLKLADLREDVENDGG-VYAKTSPVAETKLDKQDMEGKLSLL 230
           F V  + N ++YL+ A  R ++ NDG  V  +T  V   K+D+Q+MEG  SLL
Sbjct: 133 FTVKNEDNSDSYLRQAHRRMELHNDGTYVDERTDFVLMMKMDEQNMEGGDSLL 185