BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916837|Adiantum capillus-veneris mRNA, clone:
YMU001_000092_C11.
         (381 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q96RN5|MED15_HUMAN Mediator of RNA polymerase II transcriptio...    30   4.8  
sp|O84119|INCF_CHLTR Inclusion membrane protein F OS=Chlamydia t...    29   6.3  

>sp|Q96RN5|MED15_HUMAN Mediator of RNA polymerase II transcription
           subunit 15 OS=Homo sapiens GN=MED15 PE=1 SV=2
          Length = 788

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +2

Query: 107 IPDIEVPQGMEPSPNVHFTLLPILSQYSYYQFCQHNLLMRVPSEPAP 247
           IP   +P G +P   V  + LP+LS  S  Q  Q    M  P +P+P
Sbjct: 410 IPSSSIPLGRQPMAQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSP 456


>sp|O84119|INCF_CHLTR Inclusion membrane protein F OS=Chlamydia
           trachomatis GN=incF PE=4 SV=1
          Length = 104

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 104 GTICISSMVLLCLGIMHVGGVGVILFSRARLSLC 3
           G +C+ S+V LC+G   VG + V++ +     LC
Sbjct: 50  GALCVLSLVALCVGATPVGPLAVLVATTLASFLC 83

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP916837|Adiantum capillus-veneris mRNA, clone:
YMU001_000092_C11.
         (381 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9LDS1|A9LDS1_GASAC Suppressor of cytokine signaling 9 OS=Gas...    33   9.1  
tr|Q54B34|Q54B34_DICDI Putative uncharacterized protein OS=Dicty...    33   9.1  

>tr|A9LDS1|A9LDS1_GASAC Suppressor of cytokine signaling 9
           OS=Gasterosteus aculeatus GN=SOCS9 PE=2 SV=1
          Length = 533

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
 Frame = +2

Query: 116 IEVPQGMEPSPNVHFTLLPILSQ----YSYYQFCQHNLLMRVPSEPAPYHSLIKKTCVKK 283
           I + QG+EP PN       + +Q    Y +     H +     ++ AP+H L+ ++C+  
Sbjct: 240 ISIEQGVEPPPNAEIHTFEVTAQINPLYKHGPKLAHGMNELAGADRAPHHQLLLQSCLDT 299

Query: 284 TD 289
            D
Sbjct: 300 LD 301


>tr|Q54B34|Q54B34_DICDI Putative uncharacterized protein
           OS=Dictyostelium discoideum GN=DDB_0192205 PE=4 SV=1
          Length = 319

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +2

Query: 152 VHFTLLPILSQYSYYQFCQHNLLMRVPSEPAPYHSLIKKTCVKKTDHY 295
           + F  +  + +   Y+FC H    R+P E   +H  +  TCV K DH+
Sbjct: 118 IEFKSIKTIKRSETYRFCIH---CRLPKEERTHHCQLCGTCVLKMDHH 162