BP916838 |
Clone id |
YMU001_000092_D01 |
Library |
YMU01 |
Length |
484 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000092_D01. |
Accession |
BP916838 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTTCTTTCTAGGTACAGACAGTGCTCCTCATGAGAGGCATACAAAAGAAGCCACATGTGG TTGTGCTGGCATATACAATGCCCCAGTAGCCATACCACTTTATACACAAGTATTTGAACA GGCTGATGCTTTGGATAAGCTGGAGGCTTTCACAAGCTTCAATGGACCGGACTTTTACGG ACTGCCAAGAAACATATCAAAAATCACAATCATGAAGAGATCATGGATGGTACCAGATGA ATACAGGTTTGGCTCTAGCACAGTTGTTCCTATGTTTGCTGGCAAGAGTCTGGACTGGGC TGTACTTTGACCCAAAAACACCATGCTTAGTGAGCTGTGTACCTTGAACTCCTCTGATTT ACACATGGAAAGAGTTCATTTGATCTTTACCTGCAAAATAATGGTCAAAGTTGTATTGAA ATTGTTTGAGCACATTTTTTGAAGGTGCTGTGCTGATTGCAAGCAATCATTGGATGGTTT AAGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O04904 |
Definition |
sp|O04904|PYRC_ARATH Dihydroorotase, mitochondrial OS=Arabidopsis thaliana |
Align length |
102 |
Score (bit) |
155.0 |
E-value |
1.0e-37 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S6K8 |
Definition |
tr|A9S6K8|A9S6K8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
101 |
Score (bit) |
164.0 |
E-value |
3.0e-39 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916838|Adiantum capillus-veneris mRNA, clone: YMU001_000092_D01. (484 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S6K8|A9S6K8_PHYPA Predicted protein OS=Physcomitrella paten... 164 3e-39 tr|A5C5N8|A5C5N8_VITVI Putative uncharacterized protein OS=Vitis... 159 8e-38 tr|Q94J38|Q94J38_ORYSJ Putative dihydroorotase (Putative unchara... 155 9e-37 tr|Q0JJD1|Q0JJD1_ORYSJ cDNA clone:J033111I01, full insert sequen... 155 9e-37 tr|A2WV09|A2WV09_ORYSI Putative uncharacterized protein OS=Oryza... 155 9e-37 tr|Q0WRL0|Q0WRL0_ARATH Dihydroorotase (Fragment) OS=Arabidopsis ... 155 1e-36 tr|Q8VXS9|Q8VXS9_BETVU Dihydroorotase OS=Beta vulgaris GN=dhoase... 150 2e-35 tr|B6U6Z4|B6U6Z4_MAIZE Dihydroorotase OS=Zea mays PE=2 SV=1 150 3e-35 tr|B4FE52|B4FE52_MAIZE Putative uncharacterized protein OS=Zea m... 150 3e-35 tr|A5JJV0|A5JJV0_VICFA Mitochondrial dihydroorotase (Fragment) O... 147 2e-34 tr|A5JJV1|A5JJV1_BRANA Mitochondrial dihydroorotase OS=Brassica ... 147 3e-34 tr|Q2BZ07|Q2BZ07_9GAMM Dihydroorotase OS=Photobacterium sp. SKA3... 145 1e-33 tr|A4S6P4|A4S6P4_OSTLU Predicted protein (Dihydroorotase, mitoch... 144 3e-33 tr|Q1ZQQ5|Q1ZQQ5_9VIBR Dihydroorotase OS=Vibrio angustum S14 GN=... 143 4e-33 tr|Q00WV2|Q00WV2_OSTTA Dihydroorotase (ISS) OS=Ostreococcus taur... 140 2e-32 tr|B7JB11|B7JB11_THIFE Dihydroorotase, homodimeric type OS=Acidi... 140 3e-32 tr|B5ERT1|B5ERT1_ACIF5 Dihydroorotase, homodimeric type OS=Acidi... 139 9e-32 tr|Q2BKI2|Q2BKI2_9GAMM Dihydroorotase OS=Neptuniibacter caesarie... 137 2e-31 tr|B8E4P5|B8E4P5_9GAMM Dihydroorotase, homodimeric type OS=Shewa... 137 2e-31 tr|A2UYH4|A2UYH4_SHEPU Dihydroorotase OS=Shewanella putrefaciens... 137 2e-31 tr|Q21HZ1|Q21HZ1_SACD2 Dihydroorotase OS=Saccharophagus degradan... 135 8e-31 tr|B7UVV3|B7UVV3_PSEAE Dihydroorotase OS=Pseudomonas aeruginosa ... 135 1e-30 tr|A3LDU7|A3LDU7_PSEAE Dihydroorotase OS=Pseudomonas aeruginosa ... 135 1e-30 tr|A3KXG3|A3KXG3_PSEAE Dihydroorotase OS=Pseudomonas aeruginosa ... 135 1e-30 tr|Q1ZGG5|Q1ZGG5_9GAMM Dihydroorotase OS=Psychromonas sp. CNPT3 ... 134 2e-30 tr|Q1Z1G2|Q1Z1G2_PHOPR Dihydroorotase OS=Photobacterium profundu... 134 2e-30 tr|A7BTX2|A7BTX2_9GAMM Dihydroorotase, homodimeric type OS=Beggi... 134 2e-30 tr|Q47IR8|Q47IR8_DECAR Dihydroorotase OS=Dechloromonas aromatica... 133 4e-30 tr|B6ER91|B6ER91_ALISL Dihydroorotase OS=Aliivibrio salmonicida ... 133 5e-30 tr|A3IWJ3|A3IWJ3_9CHRO Dihydroorotase OS=Cyanothece sp. CCY 0110... 132 6e-30
>tr|A9S6K8|A9S6K8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_124889 PE=3 SV=1 Length = 365
Score = 164 bits (414), Expect = 3e-39 Identities = 72/101 (71%), Positives = 86/101 (85%) Frame = +2
Query: 2 FFLGTDSAPHERHTKEATCGCAGIYNAPVAIPLYTQVFEQADALDKLEAFTSFNGPDFYG 181 FFLGTDSAPHERHTKEA CGCAGI++AP+A+PLY +VF+QADALDKLE FTS NGPDFYG Sbjct: 264 FFLGTDSAPHERHTKEAPCGCAGIFSAPIALPLYAEVFDQADALDKLEGFTSLNGPDFYG 323
Query: 182 LPRNISKITIMKRSWMVPDEYRFGSSTVVPMFAGKSLDWAV 304 LPRN + T++K+ W VP EY FG TVVPM+AG +L+W + Sbjct: 324 LPRNSNTTTLVKKRWNVPTEYGFGPGTVVPMWAGHALNWNI 364
>tr|A5C5N8|A5C5N8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029424 PE=3 SV=1 Length = 221
Score = 159 bits (401), Expect = 8e-38 Identities = 72/99 (72%), Positives = 80/99 (80%) Frame = +2
Query: 2 FFLGTDSAPHERHTKEATCGCAGIYNAPVAIPLYTQVFEQADALDKLEAFTSFNGPDFYG 181 FFLGTDSAPHER KE CGCAGIYNAPVA+ LY +VFE+A ALDKLEAFTSFNGPDFYG Sbjct: 118 FFLGTDSAPHERRRKECPCGCAGIYNAPVALSLYAKVFEEAGALDKLEAFTSFNGPDFYG 177
Query: 182 LPRNISKITIMKRSWMVPDEYRFGSSTVVPMFAGKSLDW 298 LPRN SKI + K W VP+ Y F +VPMFAG++LDW Sbjct: 178 LPRNTSKIKLSKTPWKVPESYSFSFGDIVPMFAGETLDW 216
>tr|Q94J38|Q94J38_ORYSJ Putative dihydroorotase (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=P0481E12.13 PE=3 SV=1 Length = 359
Score = 155 bits (392), Expect = 9e-37 Identities = 68/99 (68%), Positives = 81/99 (81%) Frame = +2
Query: 2 FFLGTDSAPHERHTKEATCGCAGIYNAPVAIPLYTQVFEQADALDKLEAFTSFNGPDFYG 181 +FLGTDSAPH++ KE +CGCAGIY+APVA+ LY +VFEQA ALDKLEAFTSFNGPDFYG Sbjct: 253 YFLGTDSAPHDKRRKECSCGCAGIYSAPVALSLYAKVFEQAGALDKLEAFTSFNGPDFYG 312
Query: 182 LPRNISKITIMKRSWMVPDEYRFGSSTVVPMFAGKSLDW 298 LPRN SKI + K +W VPD Y + S +VPMF G +L+W Sbjct: 313 LPRNTSKIVLRKSAWKVPDTYSYSSGEIVPMFTGNTLEW 351
>tr|Q0JJD1|Q0JJD1_ORYSJ cDNA clone:J033111I01, full insert sequence OS=Oryza sativa subsp. japonica GN=Os01g0747500 PE=2 SV=1 Length = 406
Score = 155 bits (392), Expect = 9e-37 Identities = 68/99 (68%), Positives = 81/99 (81%) Frame = +2
Query: 2 FFLGTDSAPHERHTKEATCGCAGIYNAPVAIPLYTQVFEQADALDKLEAFTSFNGPDFYG 181 +FLGTDSAPH++ KE +CGCAGIY+APVA+ LY +VFEQA ALDKLEAFTSFNGPDFYG Sbjct: 300 YFLGTDSAPHDKRRKECSCGCAGIYSAPVALSLYAKVFEQAGALDKLEAFTSFNGPDFYG 359
Query: 182 LPRNISKITIMKRSWMVPDEYRFGSSTVVPMFAGKSLDW 298 LPRN SKI + K +W VPD Y + S +VPMF G +L+W Sbjct: 360 LPRNTSKIVLRKSAWKVPDTYSYSSGEIVPMFTGNTLEW 398
>tr|A2WV09|A2WV09_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03720 PE=3 SV=1 Length = 359
Score = 155 bits (392), Expect = 9e-37 Identities = 68/99 (68%), Positives = 81/99 (81%) Frame = +2
Query: 2 FFLGTDSAPHERHTKEATCGCAGIYNAPVAIPLYTQVFEQADALDKLEAFTSFNGPDFYG 181 +FLGTDSAPH++ KE +CGCAGIY+APVA+ LY +VFEQA ALDKLEAFTSFNGPDFYG Sbjct: 253 YFLGTDSAPHDKRRKECSCGCAGIYSAPVALSLYAKVFEQAGALDKLEAFTSFNGPDFYG 312
Query: 182 LPRNISKITIMKRSWMVPDEYRFGSSTVVPMFAGKSLDW 298 LPRN SKI + K +W VPD Y + S +VPMF G +L+W Sbjct: 313 LPRNTSKIVLRKSAWKVPDTYSYSSGEIVPMFTGNTLEW 351
>tr|Q0WRL0|Q0WRL0_ARATH Dihydroorotase (Fragment) OS=Arabidopsis thaliana GN=At4g22930 PE=2 SV=1 Length = 366
Score = 155 bits (391), Expect = 1e-36 Identities = 70/102 (68%), Positives = 83/102 (81%) Frame = +2
Query: 2 FFLGTDSAPHERHTKEATCGCAGIYNAPVAIPLYTQVFEQADALDKLEAFTSFNGPDFYG 181 FFLGTDSAPHER KE++CGCAGIY+AP+A+ LY +VF++A ALDKLEAFTSFNGPDFYG Sbjct: 264 FFLGTDSAPHERSRKESSCGCAGIYSAPIALSLYAKVFDEAGALDKLEAFTSFNGPDFYG 323
Query: 182 LPRNISKITIMKRSWMVPDEYRFGSSTVVPMFAGKSLDWAVL 307 LPRN SKIT+ K W VPD + F +VPMFAG++L W L Sbjct: 324 LPRNSSKITLKKSPWKVPDVFNFPFGEIVPMFAGETLQWQPL 365
>tr|Q8VXS9|Q8VXS9_BETVU Dihydroorotase OS=Beta vulgaris GN=dhoase PE=2 SV=1 Length = 345
Score = 150 bits (380), Expect = 2e-35 Identities = 68/99 (68%), Positives = 79/99 (79%) Frame = +2
Query: 2 FFLGTDSAPHERHTKEATCGCAGIYNAPVAIPLYTQVFEQADALDKLEAFTSFNGPDFYG 181 +FLGTDSAPHER KE +CGCAGIYN+PVA+ LY +VFE+A ALDKLEAFTSFNGPDFYG Sbjct: 243 YFLGTDSAPHERRRKECSCGCAGIYNSPVALSLYAKVFEEAGALDKLEAFTSFNGPDFYG 302
Query: 182 LPRNISKITIMKRSWMVPDEYRFGSSTVVPMFAGKSLDW 298 LPRN SKI + K W V + F S ++PMFAG+ LDW Sbjct: 303 LPRNTSKIKLKKEPWKVLERIPFPSGEIIPMFAGQMLDW 341
>tr|B6U6Z4|B6U6Z4_MAIZE Dihydroorotase OS=Zea mays PE=2 SV=1 Length = 401
Score = 150 bits (379), Expect = 3e-35 Identities = 66/99 (66%), Positives = 80/99 (80%) Frame = +2
Query: 2 FFLGTDSAPHERHTKEATCGCAGIYNAPVAIPLYTQVFEQADALDKLEAFTSFNGPDFYG 181 +FLGTDSAPH++ KE +CGCAGIY+APVA+ LY +VFE+A ALDKLEAFTSFNGPDFYG Sbjct: 295 YFLGTDSAPHDKRNKECSCGCAGIYSAPVALSLYVKVFEEAGALDKLEAFTSFNGPDFYG 354
Query: 182 LPRNISKITIMKRSWMVPDEYRFGSSTVVPMFAGKSLDW 298 LPRN SKI + K +W VP Y+ S +VPMF G +L+W Sbjct: 355 LPRNTSKIILRKNAWKVPATYKHSSGEIVPMFNGSTLEW 393
>tr|B4FE52|B4FE52_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 401
Score = 150 bits (379), Expect = 3e-35 Identities = 66/99 (66%), Positives = 80/99 (80%) Frame = +2
Query: 2 FFLGTDSAPHERHTKEATCGCAGIYNAPVAIPLYTQVFEQADALDKLEAFTSFNGPDFYG 181 +FLGTDSAPH++ KE +CGCAGIY+APVA+ LY +VFE+A ALDKLEAFTSFNGPDFYG Sbjct: 295 YFLGTDSAPHDKRNKECSCGCAGIYSAPVALSLYVKVFEEAGALDKLEAFTSFNGPDFYG 354
Query: 182 LPRNISKITIMKRSWMVPDEYRFGSSTVVPMFAGKSLDW 298 LPRN SKI + K +W VP Y+ S +VPMF G +L+W Sbjct: 355 LPRNTSKIILRKNAWKVPATYKHSSGEIVPMFNGSTLEW 393
>tr|A5JJV0|A5JJV0_VICFA Mitochondrial dihydroorotase (Fragment) OS=Vicia faba GN=DHO PE=2 SV=1 Length = 349
Score = 147 bits (372), Expect = 2e-34 Identities = 66/102 (64%), Positives = 80/102 (78%) Frame = +2
Query: 2 FFLGTDSAPHERHTKEATCGCAGIYNAPVAIPLYTQVFEQADALDKLEAFTSFNGPDFYG 181 FFLGTDSAPH+R KE CGCAGIYN+PVA+ LY +VFE+A AL+KLEAFTSFNGPDFYG Sbjct: 246 FFLGTDSAPHDRRNKECACGCAGIYNSPVALSLYAKVFEEAGALNKLEAFTSFNGPDFYG 305
Query: 182 LPRNISKITIMKRSWMVPDEYRFGSSTVVPMFAGKSLDWAVL 307 +PRN SKI + K W VP+ F ++PMFAG++L+W L Sbjct: 306 IPRNKSKIKLRKSPWKVPECLSFPFGDIIPMFAGETLEWEAL 347
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