BP916844 |
Clone id |
YMU001_000092_E01 |
Library |
YMU01 |
Length |
455 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000092_E01. |
Accession |
BP916844 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL585Contig1 |
Sequence |
TTCAACATGAAACACTTTTGTTGTCCTATCTATAAAGTGAATTCTATTGAACATACAAGT CAAATGATGCTAGTGTCCAAGGATCTTAAGATACTCAACCCCTTTAGATTCTCCTTTACC AACTTTTGAGTAGGCATAACTTCGATGCTCTGATAAAAGTGTGCTGCGAAATTTTGAACT TTCTTCTCTTTGCTTCAACAATTCTGGGATGGGAGTGAGCATTGATTCCTTCCCTGAATA GTAAAAGTAGCCAATTGAGTAACGAGGCTCTCTTGCATTTAGAGTAGCTCGATGTACTCC ACTAATATAACAATCATTGCTCCACACCTGAAAAACATCTCCAATGTTGACCACTAAGGC ATCTTGTCTTGGCTTAATCGTCACCCAATCTCCATTCAGCCTCACTTGTAGACCTCCCAC TTGATCTTGCCACAACAAGGTTAGAATCGACACAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q84MB3 |
Definition |
sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana |
Align length |
126 |
Score (bit) |
82.4 |
E-value |
8.0e-16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5B3E7 |
Definition |
tr|A5B3E7|A5B3E7_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
126 |
Score (bit) |
92.8 |
E-value |
8.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916844|Adiantum capillus-veneris mRNA, clone: YMU001_000092_E01. (455 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5B3E7|A5B3E7_VITVI Putative uncharacterized protein OS=Vitis... 93 8e-18 tr|A7P9B6|A7P9B6_VITVI Chromosome chr3 scaffold_8, whole genome ... 92 2e-17 tr|A5BHZ4|A5BHZ4_VITVI Putative uncharacterized protein OS=Vitis... 92 2e-17 tr|A9LY20|A9LY20_9TRAC Gibberellin 20-oxidase-like protein OS=Se... 91 3e-17 tr|A9TRQ7|A9TRQ7_PHYPA Predicted protein OS=Physcomitrella paten... 91 4e-17 tr|A9TRQ6|A9TRQ6_PHYPA Predicted protein OS=Physcomitrella paten... 91 4e-17 tr|A9TRQ2|A9TRQ2_PHYPA Predicted protein OS=Physcomitrella paten... 91 4e-17 tr|A2YSK1|A2YSK1_ORYSI Putative uncharacterized protein OS=Oryza... 91 4e-17 tr|A7P9D1|A7P9D1_VITVI Chromosome chr3 scaffold_8, whole genome ... 89 8e-17 tr|A5BD50|A5BD50_VITVI Putative uncharacterized protein OS=Vitis... 89 8e-17 tr|A5B596|A5B596_VITVI Putative uncharacterized protein OS=Vitis... 89 8e-17 tr|A9NNT1|A9NNT1_PICSI Putative uncharacterized protein OS=Picea... 89 1e-16 tr|A3QRM2|A3QRM2_SOYBN Senescence-associated nodulin 1B OS=Glyci... 89 1e-16 tr|A9NSV2|A9NSV2_PICSI Putative uncharacterized protein OS=Picea... 88 2e-16 tr|Q5D0G3|Q5D0G3_SPIOL Gibberellin 2-oxidase 3 OS=Spinacia olera... 87 3e-16 tr|A9TYR5|A9TYR5_PHYPA Predicted protein OS=Physcomitrella paten... 87 3e-16 tr|Q6YW16|Q6YW16_ORYSJ Putative Isopenicillin N synthase and rel... 87 4e-16 tr|Q0J6X8|Q0J6X8_ORYSJ Os08g0249900 protein OS=Oryza sativa subs... 87 4e-16 tr|B6TF99|B6TF99_MAIZE Gibberellin 20 oxidase 2 OS=Zea mays PE=2... 87 4e-16 tr|B4FV70|B4FV70_MAIZE Putative uncharacterized protein OS=Zea m... 87 4e-16 tr|A7P9C8|A7P9C8_VITVI Chromosome chr3 scaffold_8, whole genome ... 87 4e-16 tr|Q9LJ66|Q9LJ66_ARATH Oxylase-like protein (Putative uncharacte... 87 5e-16 tr|A9TBA0|A9TBA0_PHYPA Predicted protein OS=Physcomitrella paten... 87 5e-16 tr|A3QRM4|A3QRM4_SOYBN Senescence-associated nodulin 1A OS=Glyci... 87 5e-16 tr|A3QRM3|A3QRM3_SOYBN Senescence-associated nodulin 1A OS=Glyci... 87 5e-16 tr|Q9LHN8|Q9LHN8_ARATH Leucoanthocyanidin dioxygenase-like prote... 86 7e-16 tr|A7P9C3|A7P9C3_VITVI Chromosome chr3 scaffold_8, whole genome ... 86 7e-16 tr|A5BSR8|A5BSR8_VITVI Putative uncharacterized protein OS=Vitis... 86 7e-16 tr|A9S5X4|A9S5X4_PHYPA Predicted protein (Fragment) OS=Physcomit... 86 1e-15 tr|A9TQE0|A9TQE0_PHYPA Predicted protein OS=Physcomitrella paten... 85 2e-15
>tr|A5B3E7|A5B3E7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001938 PE=3 SV=1 Length = 342
Score = 92.8 bits (229), Expect = 8e-18 Identities = 52/126 (41%), Positives = 74/126 (58%), Gaps = 2/126 (1%) Frame = -3
Query: 453 VSILTLLWQDQVGGLQVR--LNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATL 280 V LT+L QD VGGL+V+ +G+WV +KP DA ++N+GD+ Q WSND Y S HR L Sbjct: 214 VGALTILAQDDVGGLEVKRKTDGEWVRVKPTPDAYIINVGDIIQAWSNDTYESVEHRVIL 273
Query: 279 NAREPRYSIGYFYYSGKESMLTPIPELLKQREESSKFRSTLLSEHRSYAYSKVGKGESKG 100 N+ R+SI +F+ + P+ EL K E K+R+ L + +A K G + G Sbjct: 274 NSERERFSIPFFFNPAHHLWVQPLEELTK--GEKPKYRAYNLG--KFFATRKHGNLKKLG 329
Query: 99 VEYLKI 82 VE L+I Sbjct: 330 VENLQI 335
>tr|A7P9B6|A7P9B6_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036503001 PE=3 SV=1 Length = 342
Score = 91.7 bits (226), Expect = 2e-17 Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 2/96 (2%) Frame = -3
Query: 444 LTLLWQDQVGGLQVR--LNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATLNAR 271 LT+L QD VGGL+V+ NG+WV +KP DA ++N+GD+ QVWSND Y S HR T+N+ Sbjct: 217 LTILAQDDVGGLEVKRKTNGEWVRVKPTPDAFIINVGDIIQVWSNDTYESVEHRVTVNSE 276
Query: 270 EPRYSIGYFYYSGKESMLTPIPELLKQREESSKFRS 163 R+SI F+ G + P+ EL K E K+R+ Sbjct: 277 RERFSIPVFFSPGHHVWVKPLEELTK--GEKPKYRA 310
>tr|A5BHZ4|A5BHZ4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000649 PE=4 SV=1 Length = 606
Score = 91.7 bits (226), Expect = 2e-17 Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 2/96 (2%) Frame = -3
Query: 444 LTLLWQDQVGGLQVR--LNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATLNAR 271 LT+L QD VGGL+V+ NG+WV +KP DA ++N+GD+ QVWSND Y S HR T+N++ Sbjct: 217 LTILAQDDVGGLEVKRKTNGEWVRVKPTPDAYIINVGDIIQVWSNDTYESVEHRVTVNSQ 276
Query: 270 EPRYSIGYFYYSGKESMLTPIPELLKQREESSKFRS 163 R+SI F+ G + P+ EL K E K+R+ Sbjct: 277 RERFSIPVFFSPGHHVWVKPLEELTK--GEKPKYRA 310
>tr|A9LY20|A9LY20_9TRAC Gibberellin 20-oxidase-like protein OS=Selaginella moellendorffii PE=2 SV=1 Length = 397
Score = 90.9 bits (224), Expect = 3e-17 Identities = 40/87 (45%), Positives = 60/87 (68%) Frame = -3
Query: 450 SILTLLWQDQVGGLQVRLNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATLNAR 271 S +T+L QD VGGLQ+R +G W+ +KPR D V+N+GDVFQ W+N Y S HRA +N + Sbjct: 275 SAITILHQDSVGGLQIRKDGRWIAVKPRPDTFVINLGDVFQAWTNGRYKSVEHRAVVNQK 334
Query: 270 EPRYSIGYFYYSGKESMLTPIPELLKQ 190 + R S+ +FY ++ ++TP EL+ + Sbjct: 335 QGRLSMVFFYGPQEDYVITPPDELIDE 361
>tr|A9TRQ7|A9TRQ7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_197569 PE=3 SV=1 Length = 364
Score = 90.5 bits (223), Expect = 4e-17 Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 1/95 (1%) Frame = -3
Query: 444 LTLLWQDQVGGLQV-RLNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATLNARE 268 LT+L QD VGGLQV R +G WV +KPR+DA VVN+G + QVWSND Y HR ++N R+ Sbjct: 242 LTVLAQDSVGGLQVKRKDGQWVAVKPREDAFVVNVGAILQVWSNDKYRGVEHRVSVNERK 301
Query: 267 PRYSIGYFYYSGKESMLTPIPELLKQREESSKFRS 163 R+SI FY ++ + P+P+LL + E ++++S Sbjct: 302 ERFSIPVFYDPSIKTDVFPLPQLLDE-EHPAQYQS 335
>tr|A9TRQ6|A9TRQ6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_197566 PE=4 SV=1 Length = 372
Score = 90.5 bits (223), Expect = 4e-17 Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 1/95 (1%) Frame = -3
Query: 444 LTLLWQDQVGGLQV-RLNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATLNARE 268 LT+L QD VGGLQV R +G WV +KPR+DA VVN+G + QVWSND Y HR ++N R+ Sbjct: 250 LTVLAQDSVGGLQVKRKDGQWVAVKPREDAFVVNVGAILQVWSNDKYRGVEHRVSVNERK 309
Query: 267 PRYSIGYFYYSGKESMLTPIPELLKQREESSKFRS 163 R+SI FY ++ + P+P+LL + E ++++S Sbjct: 310 ERFSIPVFYDPSIKTDVFPLPQLLDE-EHPAQYQS 343
>tr|A9TRQ2|A9TRQ2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_197565 PE=3 SV=1 Length = 377
Score = 90.5 bits (223), Expect = 4e-17 Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 1/95 (1%) Frame = -3
Query: 444 LTLLWQDQVGGLQV-RLNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATLNARE 268 LT+L QD VGGLQV R +G WV +KPR+DA VVN+G + QVWSND Y HR ++N R+ Sbjct: 255 LTVLAQDSVGGLQVKRKDGQWVAVKPREDAFVVNVGAILQVWSNDKYRGVEHRVSVNERK 314
Query: 267 PRYSIGYFYYSGKESMLTPIPELLKQREESSKFRS 163 R+SI FY ++ + P+P+LL + E ++++S Sbjct: 315 ERFSIPVFYDPSIKTDVFPLPQLLDE-EHPAQYQS 348
>tr|A2YSK1|A2YSK1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28301 PE=3 SV=1 Length = 392
Score = 90.5 bits (223), Expect = 4e-17 Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 2/123 (1%) Frame = -3
Query: 444 LTLLWQDQVGGLQVR--LNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATLNAR 271 LT+L+QD VGGL VR +G+WV ++P + ++NIGD+ QVWSND Y S HR +N Sbjct: 261 LTVLYQDAVGGLDVRRRCDGEWVRVRPIPQSFIINIGDIIQVWSNDRYESVEHRVVVNVE 320
Query: 270 EPRYSIGYFYYSGKESMLTPIPELLKQREESSKFRSTLLSEHRSYAYSKVGKGESKGVEY 91 + R+SI +F+Y +M+ P+ E++ E S R S ++ K G + V+Y Sbjct: 321 KERFSIPFFFYPASYTMVEPLEEVM---SEESPARYNPYSWGEFFSARKNGNFKKLDVDY 377
Query: 90 LKI 82 ++I Sbjct: 378 VQI 380
>tr|A7P9D1|A7P9D1_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036520001 PE=3 SV=1 Length = 285
Score = 89.4 bits (220), Expect = 8e-17 Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 2/126 (1%) Frame = -3
Query: 453 VSILTLLWQDQVGGLQVR--LNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATL 280 V LT+L QD VGGL+V+ +G+WV +KP DA ++N+GD+ Q WSND Y S HR L Sbjct: 157 VGALTILAQDDVGGLEVKRKTDGEWVRVKPTPDAYIINVGDIIQAWSNDTYESVEHRVIL 216
Query: 279 NAREPRYSIGYFYYSGKESMLTPIPELLKQREESSKFRSTLLSEHRSYAYSKVGKGESKG 100 N+ R+SI +F+ + P+ EL K E K+R+ L + A K + G Sbjct: 217 NSERERFSIPFFFNPAHHLWVQPLEELTK--GEKPKYRAYNLG--KFLATKKRSNLKKLG 272
Query: 99 VEYLKI 82 VE L+I Sbjct: 273 VENLQI 278
>tr|A5BD50|A5BD50_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011476 PE=3 SV=1 Length = 342
Score = 89.4 bits (220), Expect = 8e-17 Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 2/126 (1%) Frame = -3
Query: 453 VSILTLLWQDQVGGLQVR--LNGDWVTIKPRQDALVVNIGDVFQVWSNDCYISGVHRATL 280 V LT+L QD VGGL+V+ +G+WV +KP DA ++N+GD+ Q WSND Y S HR L Sbjct: 214 VGALTILAQDDVGGLEVKRKTDGEWVRVKPTPDAYIINVGDIIQAWSNDTYESVEHRVIL 273
Query: 279 NAREPRYSIGYFYYSGKESMLTPIPELLKQREESSKFRSTLLSEHRSYAYSKVGKGESKG 100 N+ R+SI +F+ + P+ EL K E K+R+ L + A K + G Sbjct: 274 NSERERFSIPFFFNPAHHLWVQPLEELTK--GEKPKYRAYNLG--KFLATKKRSNLKKLG 329
Query: 99 VEYLKI 82 VE L+I Sbjct: 330 VENLQI 335
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