BP916853 |
Clone id |
YMU001_000092_F03 |
Library |
YMU01 |
Length |
484 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000092_F03. |
Accession |
BP916853 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL705Contig1 |
Sequence |
TAACAAGCTGTACATGGAGATGGTGCAAACATCTCTATTTGTTCTATTCTCAAGGGAAGC CAAACATAGTTGTAAACCTCCTTAGACCAAAATCAGCTAAGGTTGTGCATCCAGCTCAAA CTTCCCCCTGGATTGAGGCTTGGGCAGCAGCAAAAGGTTTGCTCCAGGAAAGCACTAACT TCAATTTGTTGAATCCCTATCACTTCTCCTCATCCTCCTCATCTGAAGACGCAAAAATGG TCTTTGGCTGTGTTTCTGCATAAGCAGGCGCAATGTATTTGGGATCCTTCGCAGCGACAT CTGCATATTTTAGGATTGCTGCTCTAGGATCTTCGTCCATCCATGTCTCCTTGATGAGAC CTCCTTCCTTAAGAAGATATTGTGTCAAAAGGCTGCCTTTTGTCGTACCCACTCTTCCTC CGAAGCCTGGTCCTGTTACTGGCAGATCTGGCCTCTTGGACTTCATTGGATCACTACGAG CCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9W1J3 |
Definition |
sp|Q9W1J3|GAD1_DROME Gastrulation defective protein 1 homolog OS=Drosophila melanogaster |
Align length |
85 |
Score (bit) |
91.7 |
E-value |
2.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NV21 |
Definition |
tr|A9NV21|A9NV21_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
85 |
Score (bit) |
158.0 |
E-value |
1.0e-37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916853|Adiantum capillus-veneris mRNA, clone: YMU001_000092_F03. (484 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NV21|A9NV21_PICSI Putative uncharacterized protein OS=Picea... 158 1e-37 tr|A9TWT3|A9TWT3_PHYPA Predicted protein OS=Physcomitrella paten... 152 1e-35 tr|Q8H919|Q8H919_ORYSJ Os10g0464100 protein OS=Oryza sativa subs... 147 3e-34 tr|A7Q1J4|A7Q1J4_VITVI Chromosome chr7 scaffold_44, whole genome... 147 3e-34 tr|A3C5I8|A3C5I8_ORYSJ Putative uncharacterized protein OS=Oryza... 147 3e-34 tr|A2Z894|A2Z894_ORYSI Putative uncharacterized protein OS=Oryza... 147 3e-34 tr|B6SKZ4|B6SKZ4_MAIZE Nucleotide binding protein OS=Zea mays PE... 146 6e-34 tr|Q9SK69|Q9SK69_ARATH Putative WD-40 repeat protein (At2g20330/... 142 6e-33 tr|Q293F7|Q293F7_DROPS GA18958 OS=Drosophila pseudoobscura pseud... 94 3e-18 tr|B4GBL0|B4GBL0_DROPE GL11034 OS=Drosophila persimilis GN=GL110... 94 3e-18 tr|B3ME80|B3ME80_DROAN GF12507 OS=Drosophila ananassae GN=GF1250... 93 6e-18 tr|B4LM82|B4LM82_DROVI GJ20568 OS=Drosophila virilis GN=GJ20568 ... 93 7e-18 tr|B4QAZ6|B4QAZ6_DROSI GD11798 OS=Drosophila simulans GN=GD11798... 92 2e-17 tr|B4PA68|B4PA68_DROYA GE14326 OS=Drosophila yakuba GN=GE14326 P... 92 2e-17 tr|B4MYD5|B4MYD5_DROWI GK22197 OS=Drosophila willistoni GN=GK221... 92 2e-17 tr|B4KNM9|B4KNM9_DROMO GI20836 OS=Drosophila mojavensis GN=GI208... 92 2e-17 tr|B4I8T4|B4I8T4_DROSE GM16049 OS=Drosophila sechellia GN=GM1604... 92 2e-17 tr|B3NPS5|B3NPS5_DROER GG22888 OS=Drosophila erecta GN=GG22888 P... 92 2e-17 tr|B4J6L5|B4J6L5_DROGR GH20751 OS=Drosophila grimshawi GN=GH2075... 91 3e-17 tr|B0XJC0|B0XJC0_CULQU WD repeat domain 70 OS=Culex quinquefasci... 90 6e-17 tr|Q17KF1|Q17KF1_AEDAE Putative uncharacterized protein OS=Aedes... 88 2e-16 tr|B3S013|B3S013_TRIAD Putative uncharacterized protein OS=Trich... 87 5e-16 tr|A2Z895|A2Z895_ORYSI Putative uncharacterized protein OS=Oryza... 86 1e-15 tr|A7RL14|A7RL14_NEMVE Predicted protein (Fragment) OS=Nematoste... 85 2e-15 tr|A8K564|A8K564_HUMAN cDNA FLJ76716, highly similar to Homo sap... 83 8e-15 tr|Q4SJF2|Q4SJF2_TETNG Chromosome 4 SCAF14575, whole genome shot... 76 7e-13 tr|A8N0S3|A8N0S3_COPC7 Putative uncharacterized protein OS=Copri... 75 2e-12 tr|B7QE59|B7QE59_IXOSC WD-repeat protein, putative OS=Ixodes sca... 74 5e-12 tr|B6LG29|B6LG29_BRAFL Putative uncharacterized protein OS=Branc... 67 3e-10 tr|A8PT87|A8PT87_BRUMA Protein kinase domain containing protein ... 59 9e-08
>tr|A9NV21|A9NV21_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 543
Score = 158 bits (400), Expect = 1e-37 Identities = 74/85 (87%), Positives = 82/85 (96%) Frame = -1
Query: 484 KARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKY 305 KAR DP+KS+RPDLPVTGPGFGGRVG+TKGSLLTQYLLKEGG+IKETWM+EDPR AILKY Sbjct: 451 KARIDPIKSQRPDLPVTGPGFGGRVGSTKGSLLTQYLLKEGGMIKETWMEEDPREAILKY 510
Query: 304 ADVAAKDPKYIAPAYAETQPKTIFA 230 ADVAAKDPK+IAPAYA+TQP+T FA Sbjct: 511 ADVAAKDPKFIAPAYAQTQPETFFA 535
>tr|A9TWT3|A9TWT3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_199066 PE=4 SV=1 Length = 666
Score = 152 bits (383), Expect = 1e-35 Identities = 69/84 (82%), Positives = 79/84 (94%) Frame = -1
Query: 484 KARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKY 305 KAR+DP+KSKRPDLP++GPGFGGRVGTTKGSLLTQYL++EGG+IKETWMDEDPR AILK+ Sbjct: 572 KARNDPIKSKRPDLPMSGPGFGGRVGTTKGSLLTQYLMREGGMIKETWMDEDPREAILKH 631
Query: 304 ADVAAKDPKYIAPAYAETQPKTIF 233 AD AAKDP + PAYAETQP+TIF Sbjct: 632 ADAAAKDPTFFGPAYAETQPQTIF 655
>tr|Q8H919|Q8H919_ORYSJ Os10g0464100 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0071K18.5 PE=4 SV=1 Length = 646
Score = 147 bits (371), Expect = 3e-34 Identities = 68/85 (80%), Positives = 75/85 (88%) Frame = -1
Query: 484 KARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKY 305 K DP+KS +P+ PV GPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPR AILKY Sbjct: 552 KILKDPLKSHKPEAPVNGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPREAILKY 611
Query: 304 ADVAAKDPKYIAPAYAETQPKTIFA 230 AD A KDPK+IAPAY++TQPK +FA Sbjct: 612 ADAAEKDPKFIAPAYSQTQPKPVFA 636
>tr|A7Q1J4|A7Q1J4_VITVI Chromosome chr7 scaffold_44, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028489001 PE=4 SV=1 Length = 511
Score = 147 bits (371), Expect = 3e-34 Identities = 67/85 (78%), Positives = 78/85 (91%) Frame = -1
Query: 484 KARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKY 305 K DP+KS +P+LP+TGPGFGGRVG+TKGSLLTQYLLK+GGLIKETWM+EDPR AILKY Sbjct: 418 KILKDPIKSHKPELPITGPGFGGRVGSTKGSLLTQYLLKQGGLIKETWMEEDPREAILKY 477
Query: 304 ADVAAKDPKYIAPAYAETQPKTIFA 230 ADVAA DPK+IAPAYA+TQP+ +FA Sbjct: 478 ADVAANDPKFIAPAYAQTQPEPVFA 502
>tr|A3C5I8|A3C5I8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_030560 PE=4 SV=1 Length = 571
Score = 147 bits (371), Expect = 3e-34 Identities = 68/85 (80%), Positives = 75/85 (88%) Frame = -1
Query: 484 KARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKY 305 K DP+KS +P+ PV GPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPR AILKY Sbjct: 477 KILKDPLKSHKPEAPVNGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPREAILKY 536
Query: 304 ADVAAKDPKYIAPAYAETQPKTIFA 230 AD A KDPK+IAPAY++TQPK +FA Sbjct: 537 ADAAEKDPKFIAPAYSQTQPKPVFA 561
>tr|A2Z894|A2Z894_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_33932 PE=4 SV=1 Length = 644
Score = 147 bits (371), Expect = 3e-34 Identities = 68/85 (80%), Positives = 75/85 (88%) Frame = -1
Query: 484 KARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKY 305 K DP+KS +P+ PV GPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPR AILKY Sbjct: 550 KILKDPLKSHKPEAPVNGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPREAILKY 609
Query: 304 ADVAAKDPKYIAPAYAETQPKTIFA 230 AD A KDPK+IAPAY++TQPK +FA Sbjct: 610 ADAAEKDPKFIAPAYSQTQPKPVFA 634
>tr|B6SKZ4|B6SKZ4_MAIZE Nucleotide binding protein OS=Zea mays PE=2 SV=1 Length = 622
Score = 146 bits (368), Expect = 6e-34 Identities = 67/85 (78%), Positives = 75/85 (88%) Frame = -1
Query: 484 KARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKY 305 K DP+KS +P+ PV GPG+GGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPR AILKY Sbjct: 529 KILKDPLKSHKPEAPVNGPGYGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPREAILKY 588
Query: 304 ADVAAKDPKYIAPAYAETQPKTIFA 230 AD A KDPK+IAPAY++TQPK +FA Sbjct: 589 ADAAEKDPKFIAPAYSQTQPKPVFA 613
>tr|Q9SK69|Q9SK69_ARATH Putative WD-40 repeat protein (At2g20330/F11A3.12) OS=Arabidopsis thaliana GN=At2g20330 PE=2 SV=1 Length = 648
Score = 142 bits (359), Expect = 6e-33 Identities = 65/85 (76%), Positives = 76/85 (89%) Frame = -1
Query: 484 KARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKY 305 KA DPMKS +P++P+TGPG GGRVGTT LLTQYLLK+GG+IKETWM+EDPR AILKY Sbjct: 551 KALKDPMKSHKPEIPMTGPGHGGRVGTTGSGLLTQYLLKQGGMIKETWMEEDPREAILKY 610
Query: 304 ADVAAKDPKYIAPAYAETQPKTIFA 230 A+VA KDPK+IAPAY++TQPKTIFA Sbjct: 611 AEVAVKDPKFIAPAYSQTQPKTIFA 635
>tr|Q293F7|Q293F7_DROPS GA18958 OS=Drosophila pseudoobscura pseudoobscura GN=GA18958 PE=4 SV=2 Length = 644
Score = 94.4 bits (233), Expect = 3e-18 Identities = 50/85 (58%), Positives = 64/85 (75%) Frame = -1
Query: 484 KARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKY 305 KAR DP+KSKRPDLP+T G GGRV ++ G+L + Y+++ GL K D+DPR AILKY Sbjct: 542 KARMDPVKSKRPDLPITS-GQGGRVASSGGTL-SSYVIRNLGLSKRVDDDQDPREAILKY 599
Query: 304 ADVAAKDPKYIAPAYAETQPKTIFA 230 A AA++P +IAPAY ETQPK IF+ Sbjct: 600 AKDAAENPYWIAPAYKETQPKAIFS 624
>tr|B4GBL0|B4GBL0_DROPE GL11034 OS=Drosophila persimilis GN=GL11034 PE=4 SV=1 Length = 644
Score = 94.4 bits (233), Expect = 3e-18 Identities = 50/85 (58%), Positives = 64/85 (75%) Frame = -1
Query: 484 KARSDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKY 305 KAR DP+KSKRPDLP+T G GGRV ++ G+L + Y+++ GL K D+DPR AILKY Sbjct: 542 KARMDPVKSKRPDLPITS-GQGGRVASSGGTL-SSYVIRNLGLSKRVDDDQDPREAILKY 599
Query: 304 ADVAAKDPKYIAPAYAETQPKTIFA 230 A AA++P +IAPAY ETQPK IF+ Sbjct: 600 AKDAAENPYWIAPAYKETQPKAIFS 624
|