BP916858
Clone id YMU001_000092_F11
Library
Length 396
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000092_F11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CATTGTCAGAAGTAAATATTTCTGCCAATGAAATGCGTAAGAGGCAATCACAAGGAGACA
ACGCCGAGATCTATTCAAGGCTATGGCTTTTGCGAACACTTCGGTCGATTGCACTACAAT
CAACTAAAGCTGAAAACCAGGAGCCCCGGCCTATACCCTCAATGCACAGATGAAACCATA
TGAGCTGTATCAGTACGAAACGCAATTGAAGGTAGCAAATCAAACTGCTGTTAGTAGGAC
TATCAATCGAAAGTTCATTCAAGTAAGGTGAACCCACTGCTTCAAGGGCACCAGATACTC
ACACACCAATTGCTCATTATCTGATGCAAAGCATTGCCCAAAGCACAAGAAACGTCGCTT
CGATTTTGCCGGGCTTCCTCCATCCGACAGGTCGTC
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916858|Adiantum capillus-veneris mRNA, clone:
YMU001_000092_F11.
(381 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q832A6
Definition tr|Q832A6|Q832A6_ENTFA Conserved domain protein OS=Enterococcus faecalis
Align length 42
Score (bit) 34.3
E-value 3.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916858|Adiantum capillus-veneris mRNA, clone:
YMU001_000092_F11.
(381 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q832A6|Q832A6_ENTFA Conserved domain protein OS=Enterococcus ... 34 3.1
tr|Q6AL95|Q6AL95_DESPS Putative uncharacterized protein OS=Desul... 34 4.1
tr|B8LPW0|B8LPW0_PICSI Putative uncharacterized protein OS=Picea... 33 7.2

>tr|Q832A6|Q832A6_ENTFA Conserved domain protein OS=Enterococcus
faecalis GN=EF_2334 PE=4 SV=1
Length = 328

Score = 34.3 bits (77), Expect = 3.1
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3

Query: 21 RKRQSQGDNAEIYSRLWLLRTLRSIALQSTKAENQEPRPIPS 146
RK+Q QG A IY + ++L + +Q+ AENQ+ RP+PS
Sbjct: 101 RKKQGQGHPARIYVKNFILEPEPTAPVQT--AENQQSRPLPS 140


>tr|Q6AL95|Q6AL95_DESPS Putative uncharacterized protein
OS=Desulfotalea psychrophila GN=DP2151 PE=4 SV=1
Length = 187

Score = 33.9 bits (76), Expect = 4.1
Identities = 26/80 (32%), Positives = 39/80 (48%)
Frame = -3

Query: 241 ELSIDSPTNSSLICYLQLRFVLIQLIWFHLCIEGIGRGSWFSALVDCSAIDRSVRKSHSL 62
+L+IDS + + ++ Q IWF L I G G+WF L+ C+ + S KS L
Sbjct: 8 DLAIDSHRPMKTL----INVLIYQSIWF-LSILGGNSGAWFGLLLLCAHLFYSATKSADL 62

Query: 61 E*ISALSPCDCLLRISLAEI 2
I AL LL +L ++
Sbjct: 63 RMIGALFVAGLLLDGTLHQV 82


>tr|B8LPW0|B8LPW0_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 385

Score = 33.1 bits (74), Expect = 7.2
Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 3/24 (12%)
Frame = -1

Query: 363 GSPAKSKRRFLCFGQCF---ASDN 301
G+ A+ KRRF CFGQCF +SDN
Sbjct: 362 GAAARRKRRFSCFGQCFSPGSSDN 385