| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916859|Adiantum capillus-veneris mRNA, clone:
YMU001_000092_F12.
(307 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9BYR2|KRA45_HUMAN Keratin-associated protein 4-5 OS=Homo sap... 26 0.77
sp|Q19061|SRD59_CAEEL Serpentine receptor class delta-59 OS=Caen... 30 2.9
sp|Q28RK3|PYRC_JANSC Dihydroorotase OS=Jannaschia sp. (strain CC... 30 2.9
sp|Q8NB54|CR023_HUMAN Uncharacterized protein C18orf23 OS=Homo s... 30 3.8
sp|Q54R08|Y5676_DICDI Putative uncharacterized transmembrane pro... 29 6.4
sp|P06333|TCB1_RABIT T-cell receptor beta chain ANA 11 OS=Orycto... 29 8.4
sp|Q9BYQ6|KR411_HUMAN Keratin-associated protein 4-11 OS=Homo sa... 24 9.6
>sp|Q9BYR2|KRA45_HUMAN Keratin-associated protein 4-5 OS=Homo
sapiens GN=KRTAP4-5 PE=2 SV=1
Length = 186
Score = 26.2 bits (56), Expect(2) = 0.77
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 222 TCLHMYVCKRTHARPCTCMHP 284
+C H C+ + RPC C+ P
Sbjct: 134 SCCHPSCCESSCCRPCCCVRP 154
Score = 25.0 bits (53), Expect(2) = 0.77
Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 2/18 (11%)
Frame = +2
Query: 77 TCAC--VCVSTCVRPHPC 124
TC C CVS+C RP C
Sbjct: 99 TCCCPSCCVSSCCRPQCC 116
Score = 24.3 bits (51), Expect(2) = 7.5
Identities = 9/19 (47%), Positives = 12/19 (63%), Gaps = 2/19 (10%)
Frame = +2
Query: 74 PTCA--CVCVSTCVRPHPC 124
PTC C+S+C RP+ C
Sbjct: 53 PTCCHPSCCISSCCRPYCC 71
Score = 23.5 bits (49), Expect(2) = 7.5
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 222 TCLHMYVCKRTHARPCTC 275
+C Y C+ + RPC C
Sbjct: 64 SCCRPYCCESSCCRPCCC 81
>sp|Q19061|SRD59_CAEEL Serpentine receptor class delta-59
OS=Caenorhabditis elegans GN=srd-59 PE=2 SV=2
Length = 325
Score = 30.4 bits (67), Expect = 2.9
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = +3
Query: 3 QHELLLNSLKVLV---GPSKYILPETC-LHVHVYV 95
QH LL NS+ V GP Y+ P TC ++ HV++
Sbjct: 67 QHRLLTNSISAAVLSLGPCSYVSPTTCFINYHVFM 101
>sp|Q28RK3|PYRC_JANSC Dihydroorotase OS=Jannaschia sp. (strain CCS1)
GN=pyrC PE=3 SV=1
Length = 347
Score = 30.4 bits (67), Expect = 2.9
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +3
Query: 105 VCAHTHALACTPHMLNLNGLIIH-HSFQTVVGPSRYLLPETCLHMYVCKRTH 257
V + T+ ++C H+ + +G +++ +F ++ GP+RY L M + KR H
Sbjct: 266 VFSATNTMSCLAHVFDEDGALVNLEAFTSLNGPARYGLAPNAATMTLEKRDH 317
>sp|Q8NB54|CR023_HUMAN Uncharacterized protein C18orf23 OS=Homo
sapiens GN=C18orf23 PE=2 SV=1
Length = 160
Score = 30.0 bits (66), Expect = 3.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 62 ARNMPTCACVCVSTCVRPHPCTCMHAP 142
+R + C CVCV V H C C AP
Sbjct: 52 SRCLGACVCVCVCLYVCVHVCECARAP 78
>sp|Q54R08|Y5676_DICDI Putative uncharacterized transmembrane
protein DDB_G0283489 OS=Dictyostelium discoideum
GN=DDB_G0283489 PE=4 SV=1
Length = 46
Score = 29.3 bits (64), Expect = 6.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 55 IYCQKHAYMCMCMCEYVC 108
+Y K AYMC+C+C VC
Sbjct: 9 VYVYKCAYMCVCVCVCVC 26
>sp|P06333|TCB1_RABIT T-cell receptor beta chain ANA 11
OS=Oryctolagus cuniculus PE=4 SV=1
Length = 319
Score = 28.9 bits (63), Expect = 8.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 69 TCLHVHVYV*VRVCAHTH 122
TC H H++ VC HTH
Sbjct: 69 TCTHTHIHASTHVCIHTH 86
>sp|Q9BYQ6|KR411_HUMAN Keratin-associated protein 4-11 OS=Homo
sapiens GN=KRTAP4-11 PE=2 SV=1
Length = 195
Score = 23.9 bits (50), Expect(2) = 9.6
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 7/28 (25%)
Frame = +2
Query: 74 PTCACVCVSTCVRPHPC-------TCMH 136
P+C CVS+C RP C TC H
Sbjct: 112 PSC---CVSSCCRPQCCQSVCCQPTCCH 136
Score = 23.5 bits (49), Expect(2) = 9.6
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = +3
Query: 222 TCLHMYVCKRTHARPCTCMHP 284
+C C+ + RPC C+ P
Sbjct: 143 SCCRPSCCESSCCRPCCCLRP 163
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916859|Adiantum capillus-veneris mRNA, clone:
YMU001_000092_F12.
(307 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q6ZVA9|Q6ZVA9_HUMAN cDNA FLJ42813 fis, clone BRCAN2012355 OS=... 44 0.003
tr|Q4YLP4|Q4YLP4_PLABE Putative uncharacterized protein OS=Plasm... 40 0.059
tr|A6NFT5|A6NFT5_HUMAN Putative uncharacterized protein ENSP0000... 36 0.85
tr|Q4T1T3|Q4T1T3_TETNG Chromosome undetermined SCAF10487, whole ... 34 3.2
tr|Q4SXU4|Q4SXU4_TETNG Chromosome undetermined SCAF12326, whole ... 34 3.2
tr|A9UZK9|A9UZK9_MONBE Predicted protein OS=Monosiga brevicollis... 34 3.2
tr|Q6ZS38|Q6ZS38_HUMAN cDNA FLJ45860 fis, clone OCBBF2036019, mo... 34 3.2
tr|Q4TA27|Q4TA27_TETNG Chromosome undetermined SCAF7470, whole g... 34 4.2
tr|A9V4V2|A9V4V2_MONBE Predicted protein OS=Monosiga brevicollis... 34 4.2
tr|B0WXP6|B0WXP6_CULQU Dynein heavy chain OS=Culex quinquefascia... 34 4.2
tr|Q4SXN4|Q4SXN4_TETNG Chromosome 12 SCAF12356, whole genome sho... 33 7.2
tr|A9V2E1|A9V2E1_MONBE Predicted protein OS=Monosiga brevicollis... 33 7.2
tr|A8MU16|A8MU16_HUMAN Putative uncharacterized protein ENSP0000... 33 7.2
tr|B6PR90|B6PR90_BRAFL Putative uncharacterized protein (Fragmen... 30 8.3
tr|A9UVK7|A9UVK7_MONBE Predicted protein OS=Monosiga brevicollis... 33 9.4
tr|Q6ZV49|Q6ZV49_HUMAN cDNA FLJ42988 fis, clone BRTHA2008955 OS=... 33 9.4
tr|A7SLZ9|A7SLZ9_NEMVE Predicted protein (Fragment) OS=Nematoste... 33 9.4
tr|A6NI32|A6NI32_HUMAN Putative uncharacterized protein ENSP0000... 33 9.4
>tr|Q6ZVA9|Q6ZVA9_HUMAN cDNA FLJ42813 fis, clone BRCAN2012355
OS=Homo sapiens PE=2 SV=1
Length = 180
Score = 44.3 bits (103), Expect = 0.003
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 72 CLHVHVYV*VRVCAHTHALACT-PHMLNLNGLIIHHSFQTVVGPSRYLLPETCLHMYVCK 248
C+H+H+ V + +C +TH CT HM + ++ + C+H+Y+C
Sbjct: 22 CIHIHICVHIYICMYTHRYMCTRKHMYTHKHMYVYTYIYVYTYTYVCVHIHICVHIYLCM 81
Query: 249 RTHARPCTCMH 281
TH C +H
Sbjct: 82 YTHTYMCAHIH 92
>tr|Q4YLP4|Q4YLP4_PLABE Putative uncharacterized protein
OS=Plasmodium berghei GN=PB400804.00.0 PE=4 SV=1
Length = 202
Score = 40.0 bits (92), Expect = 0.059
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 13/86 (15%)
Frame = +3
Query: 69 TCLHVHVYV*VRVCAHT------HALACTPHMLNLNGLIIHHSFQTVVGPSRYLLPETC- 227
TC+H +++ + CAH HA A T +N++ + H S ++ TC
Sbjct: 101 TCIHTPMHMHAQTCAHACTHTHVHAHAYTYKHMNIHMPMYMHK------QSMHMHKHTCA 154
Query: 228 LHMYVCKRTHA------RPCTCMHPP 287
+H Y C THA PCTC+H P
Sbjct: 155 MHAYTC--THASTCIYTHPCTCIHTP 178
Score = 33.9 bits (76), Expect = 4.2
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Frame = +3
Query: 66 ETCLHVHVYV*VRVCAH--THALACTPHMLNLNGLIIHHSFQ---TVVGPSRYLLPETC- 227
+TC H + + CA+ T++ CT ++++ H++ T + ++ TC
Sbjct: 28 DTCAHACTHT-LHTCAYVYTNSCTCTYTFIHMHTYTHEHTYTYLCTCMHSPMHMHTHTCA 86
Query: 228 LHMYVCKRTHARPCTCMHPP 287
+H++ H CTC+H P
Sbjct: 87 IHVHTHIHIHIHQCTCIHTP 106
Score = 32.7 bits (73), Expect = 9.4
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 16/91 (17%)
Frame = +1
Query: 55 IYCQKHAYMCMCMCEYVCAPTPMHLHARPTC*ISMA*LFIIASKR*LAHPDIY------- 213
I+ H ++ + C C TPMH+HA+ TC + + A H +I+
Sbjct: 87 IHVHTHIHIHIHQC--TCIHTPMHMHAQ-TCAHACTHTHVHAHAYTYKHMNIHMPMYMHK 143
Query: 214 ---------CQKHAYICTSVSARMRAHALAC 279
C HAY CT S + H C
Sbjct: 144 QSMHMHKHTCAMHAYTCTHASTCIYTHPCTC 174
>tr|A6NFT5|A6NFT5_HUMAN Putative uncharacterized protein
ENSP00000369591 OS=Homo sapiens PE=4 SV=2
Length = 175
Score = 36.2 bits (82), Expect = 0.85
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Frame = +3
Query: 69 TCLHV----HVYV*VRVCAHTHALACTPHMLNLNGLIIHHSFQTVVGPSRYLLPETCLHM 236
TC+H+ H + + C HTH T H L + +H QT + ++ T +++
Sbjct: 7 TCMHIYTHAHTHAHIHTCIHTHTHMHT-HTLTYTHIHMHTHTQTHIYTQAHIHSCTQINI 65
Query: 237 Y------VCKRTHARPCTCMHPPT 290
Y C +TH CT H T
Sbjct: 66 YTYAYTLTCTQTHTHICTHAHTLT 89
>tr|Q4T1T3|Q4T1T3_TETNG Chromosome undetermined SCAF10487, whole
genome shotgun sequence OS=Tetraodon nigroviridis
GN=GSTENG00008653001 PE=4 SV=1
Length = 2101
Score = 34.3 bits (77), Expect = 3.2
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Frame = +2
Query: 74 PTCACVCVSTCV---RPHPCTC 130
P C CVCV CV RP PC C
Sbjct: 309 PACVCVCVCVCVRVFRPQPCVC 330
>tr|Q4SXU4|Q4SXU4_TETNG Chromosome undetermined SCAF12326, whole
genome shotgun sequence. (Fragment) OS=Tetraodon
nigroviridis GN=GSTENG00010670001 PE=4 SV=1
Length = 2147
Score = 34.3 bits (77), Expect = 3.2
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Frame = +2
Query: 74 PTCACVCVSTCV---RPHPCTC 130
P C CVCV CV RP PC C
Sbjct: 273 PACVCVCVCVCVRVFRPQPCVC 294
>tr|A9UZK9|A9UZK9_MONBE Predicted protein OS=Monosiga brevicollis
GN=32452 PE=4 SV=1
Length = 1328
Score = 34.3 bits (77), Expect = 3.2
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +2
Query: 29 QSASWPKQIYIARNMPTCACVCVSTCVRPHPCTCM 133
Q+AS + IY A P C CVCV CV C C+
Sbjct: 1142 QTASQYQFIYEALKNPLCVCVCVCVCVCVCVCVCV 1176
>tr|Q6ZS38|Q6ZS38_HUMAN cDNA FLJ45860 fis, clone OCBBF2036019,
moderately similar to NADH-ubiquinone oxidoreductase 20
kDa subunit, mitochondrial (EC 1.6.5.3) OS=Homo sapiens
PE=2 SV=1
Length = 294
Score = 34.3 bits (77), Expect = 3.2
Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 11/82 (13%)
Frame = +3
Query: 69 TCLHVHV--YV*VRVCA-HTHALACTPHMLNLNGLIIHHSFQTVVGPSRYLLPETCL--- 230
TC HVH +V V HTH A HM +H T TC
Sbjct: 117 TCAHVHASSHVWTDVYTDHTHTHAHNAHMHTRTHAHLHTHAHTSTCAHTLAHIHTCTLAL 176
Query: 231 -----HMYVCKRTHARPCTCMH 281
H+Y C RT A CT MH
Sbjct: 177 MHTHAHIYTCTRTLAHTCTYMH 198
>tr|Q4TA27|Q4TA27_TETNG Chromosome undetermined SCAF7470, whole
genome shotgun sequence. (Fragment) OS=Tetraodon
nigroviridis GN=GSTENG00004469001 PE=4 SV=1
Length = 381
Score = 33.9 bits (76), Expect = 4.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 50 QIYIARNMPTCACVCVSTCVRPHPCTCMHAPHAKSQ 157
Q+ + + P C CVCV CV C C+ P A+++
Sbjct: 74 QVRFSSDKPVCVCVCVCVCV----CVCVCVPRAETE 105
>tr|A9V4V2|A9V4V2_MONBE Predicted protein OS=Monosiga brevicollis
GN=27287 PE=4 SV=1
Length = 364
Score = 33.9 bits (76), Expect = 4.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 80 CACVCVSTCVRPHPCTCMHAPHAKSQWLN 166
C CVCV CV C C HA + W N
Sbjct: 99 CVCVCVCVCVCVCVCVCGDGAHADAGWTN 127
>tr|B0WXP6|B0WXP6_CULQU Dynein heavy chain OS=Culex quinquefasciatus
GN=CpipJ_CPIJ012272 PE=4 SV=1
Length = 233
Score = 33.9 bits (76), Expect = 4.2
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +3
Query: 6 HELLLNSLKVLVGPSKYILPETCLHVHVYV*VRVCAHTHALACTPHMLNLNGLIIHHS-- 179
H L + L V + ++ +CLHV + C H +C H+ + L++ S
Sbjct: 76 HVFLYSCLHVFMSSCLHVFMSSCLHVFM----SSCLHVFMSSCL-HVFMYSCLLVFMSSC 130
Query: 180 FQTVVGPSRYLLPETCLHMYVCKRTHARPCTCMH 281
+ ++ +CLH+++ H +C+H
Sbjct: 131 LHVFMSSCLHVFLSSCLHVFMSSCLHVSMSSCLH 164
Score = 32.7 bits (73), Expect = 9.4
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Frame = +3
Query: 6 HELLLNSLKVLVGPSKYILPETCLHVHVY----V*VRVCAHTHALACTPHMLNLNGLIIH 173
H + + L V + ++ +CLHV +Y V + C H +C H+ + L +
Sbjct: 92 HVFMSSCLHVFMSSCLHVFMSSCLHVFMYSCLLVFMSSCLHVFMSSCL-HVFLSSCLHVF 150
Query: 174 HSFQTVVGPSR--YLLPETCLHMYVCKRTHARPCTCMH 281
S V S ++ +CLH+++ H +C+H
Sbjct: 151 MSSCLHVSMSSCLHVFMSSCLHVFMSSCLHVFMSSCLH 188
|