BP916871 |
Clone id |
YMU001_000093_A07 |
Library |
YMU01 |
Length |
542 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000093_A07. |
Accession |
BP916871 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL705Contig1 |
Sequence |
CTCACTTCACAATTTCAGGAAGTTCATTAACTACTGCACTAACTCACCTTCTGGAGGAAG ATGGCATAACAAGCTGTACATGGAGATGGTGCAAACATCTCTATTTGTTCTATTCTCAAG GGAAGCCAAACATAGTTGTAAACCTCCTTAGACCAAAATCAGCTAAGGTTGTGCATCCAG CTCAAACTTCCCCCTGGATTGAGGCTTGGCAGCAGCAAAAGGTTTGCTCCAGGAAAGCAC TAACTTCAATTTGTTGAATCCCTATCACTTCTCCTCATCCTCCTCATCTGAAGACGCAAA AATGGTCTTTGGCTGTGTTTCTGCATAAGCAGGCGCAATGTATTTGGGATCCTTCGCAGC GACATCTGCATATTTTAGGATTGCTGCTCTTGGATCTTCGTCCATCCATGTCTCCTTGAT GAGACCTCCTTCCTTAAGAAGATATTGTGTCAAAAGGCTGCCTTTTGTCGTACCCACTCT TCCTCCGAAGCCTGGTCCTGTTACTGGCAGATCTGGCCTCTTGGACTTCATTGGATCACT AC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9W1J3 |
Definition |
sp|Q9W1J3|GAD1_DROME Gastrulation defective protein 1 homolog OS=Drosophila melanogaster |
Align length |
81 |
Score (bit) |
86.7 |
E-value |
7.0e-17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NV21 |
Definition |
tr|A9NV21|A9NV21_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
81 |
Score (bit) |
154.0 |
E-value |
4.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP916871|Adiantum capillus-veneris mRNA, clone: YMU001_000093_A07. (542 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NV21|A9NV21_PICSI Putative uncharacterized protein OS=Picea... 154 4e-36 tr|Q8H919|Q8H919_ORYSJ Os10g0464100 protein OS=Oryza sativa subs... 146 6e-34 tr|A9TWT3|A9TWT3_PHYPA Predicted protein OS=Physcomitrella paten... 146 6e-34 tr|A7Q1J4|A7Q1J4_VITVI Chromosome chr7 scaffold_44, whole genome... 146 6e-34 tr|A3C5I8|A3C5I8_ORYSJ Putative uncharacterized protein OS=Oryza... 146 6e-34 tr|A2Z894|A2Z894_ORYSI Putative uncharacterized protein OS=Oryza... 146 6e-34 tr|B6SKZ4|B6SKZ4_MAIZE Nucleotide binding protein OS=Zea mays PE... 145 1e-33 tr|Q9SK69|Q9SK69_ARATH Putative WD-40 repeat protein (At2g20330/... 140 6e-32 tr|Q293F7|Q293F7_DROPS GA18958 OS=Drosophila pseudoobscura pseud... 89 1e-16 tr|B4GBL0|B4GBL0_DROPE GL11034 OS=Drosophila persimilis GN=GL110... 89 1e-16 tr|B4LM82|B4LM82_DROVI GJ20568 OS=Drosophila virilis GN=GJ20568 ... 88 3e-16 tr|B3ME80|B3ME80_DROAN GF12507 OS=Drosophila ananassae GN=GF1250... 88 3e-16 tr|B0XJC0|B0XJC0_CULQU WD repeat domain 70 OS=Culex quinquefasci... 87 6e-16 tr|B4QAZ6|B4QAZ6_DROSI GD11798 OS=Drosophila simulans GN=GD11798... 87 7e-16 tr|B4PA68|B4PA68_DROYA GE14326 OS=Drosophila yakuba GN=GE14326 P... 87 7e-16 tr|B4MYD5|B4MYD5_DROWI GK22197 OS=Drosophila willistoni GN=GK221... 87 7e-16 tr|B4KNM9|B4KNM9_DROMO GI20836 OS=Drosophila mojavensis GN=GI208... 87 7e-16 tr|B4I8T4|B4I8T4_DROSE GM16049 OS=Drosophila sechellia GN=GM1604... 87 7e-16 tr|B3NPS5|B3NPS5_DROER GG22888 OS=Drosophila erecta GN=GG22888 P... 87 7e-16 tr|B4J6L5|B4J6L5_DROGR GH20751 OS=Drosophila grimshawi GN=GH2075... 86 1e-15 tr|A2Z895|A2Z895_ORYSI Putative uncharacterized protein OS=Oryza... 86 2e-15 tr|Q17KF1|Q17KF1_AEDAE Putative uncharacterized protein OS=Aedes... 85 2e-15 tr|B3S013|B3S013_TRIAD Putative uncharacterized protein OS=Trich... 84 6e-15 tr|A7RL14|A7RL14_NEMVE Predicted protein (Fragment) OS=Nematoste... 83 1e-14 tr|A8K564|A8K564_HUMAN cDNA FLJ76716, highly similar to Homo sap... 80 5e-14 tr|Q4SJF2|Q4SJF2_TETNG Chromosome 4 SCAF14575, whole genome shot... 74 5e-12 tr|A8N0S3|A8N0S3_COPC7 Putative uncharacterized protein OS=Copri... 72 1e-11 tr|B7QE59|B7QE59_IXOSC WD-repeat protein, putative OS=Ixodes sca... 68 3e-10 tr|B6LG29|B6LG29_BRAFL Putative uncharacterized protein OS=Branc... 64 4e-09 tr|Q013M4|Q013M4_OSTTA Putative WD domain containing protein (IS... 59 2e-07
>tr|A9NV21|A9NV21_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 543
Score = 154 bits (388), Expect = 4e-36 Identities = 71/81 (87%), Positives = 79/81 (97%) Frame = -3
Query: 537 DPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKYADVA 358 DP+KS+RPDLPVTGPGFGGRVG+TKGSLLTQYLLKEGG+IKETWM+EDPR AILKYADVA Sbjct: 455 DPIKSQRPDLPVTGPGFGGRVGSTKGSLLTQYLLKEGGMIKETWMEEDPREAILKYADVA 514
Query: 357 AKDPKYIAPAYAETQPKTIFA 295 AKDPK+IAPAYA+TQP+T FA Sbjct: 515 AKDPKFIAPAYAQTQPETFFA 535
>tr|Q8H919|Q8H919_ORYSJ Os10g0464100 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0071K18.5 PE=4 SV=1 Length = 646
Score = 146 bits (369), Expect = 6e-34 Identities = 67/81 (82%), Positives = 74/81 (91%) Frame = -3
Query: 537 DPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKYADVA 358 DP+KS +P+ PV GPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPR AILKYAD A Sbjct: 556 DPLKSHKPEAPVNGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPREAILKYADAA 615
Query: 357 AKDPKYIAPAYAETQPKTIFA 295 KDPK+IAPAY++TQPK +FA Sbjct: 616 EKDPKFIAPAYSQTQPKPVFA 636
>tr|A9TWT3|A9TWT3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_199066 PE=4 SV=1 Length = 666
Score = 146 bits (369), Expect = 6e-34 Identities = 66/81 (81%), Positives = 76/81 (93%) Frame = -3
Query: 540 SDPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKYADV 361 +DP+KSKRPDLP++GPGFGGRVGTTKGSLLTQYL++EGG+IKETWMDEDPR AILK+AD Sbjct: 575 NDPIKSKRPDLPMSGPGFGGRVGTTKGSLLTQYLMREGGMIKETWMDEDPREAILKHADA 634
Query: 360 AAKDPKYIAPAYAETQPKTIF 298 AAKDP + PAYAETQP+TIF Sbjct: 635 AAKDPTFFGPAYAETQPQTIF 655
>tr|A7Q1J4|A7Q1J4_VITVI Chromosome chr7 scaffold_44, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028489001 PE=4 SV=1 Length = 511
Score = 146 bits (369), Expect = 6e-34 Identities = 66/81 (81%), Positives = 77/81 (95%) Frame = -3
Query: 537 DPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKYADVA 358 DP+KS +P+LP+TGPGFGGRVG+TKGSLLTQYLLK+GGLIKETWM+EDPR AILKYADVA Sbjct: 422 DPIKSHKPELPITGPGFGGRVGSTKGSLLTQYLLKQGGLIKETWMEEDPREAILKYADVA 481
Query: 357 AKDPKYIAPAYAETQPKTIFA 295 A DPK+IAPAYA+TQP+ +FA Sbjct: 482 ANDPKFIAPAYAQTQPEPVFA 502
>tr|A3C5I8|A3C5I8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_030560 PE=4 SV=1 Length = 571
Score = 146 bits (369), Expect = 6e-34 Identities = 67/81 (82%), Positives = 74/81 (91%) Frame = -3
Query: 537 DPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKYADVA 358 DP+KS +P+ PV GPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPR AILKYAD A Sbjct: 481 DPLKSHKPEAPVNGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPREAILKYADAA 540
Query: 357 AKDPKYIAPAYAETQPKTIFA 295 KDPK+IAPAY++TQPK +FA Sbjct: 541 EKDPKFIAPAYSQTQPKPVFA 561
>tr|A2Z894|A2Z894_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_33932 PE=4 SV=1 Length = 644
Score = 146 bits (369), Expect = 6e-34 Identities = 67/81 (82%), Positives = 74/81 (91%) Frame = -3
Query: 537 DPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKYADVA 358 DP+KS +P+ PV GPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPR AILKYAD A Sbjct: 554 DPLKSHKPEAPVNGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPREAILKYADAA 613
Query: 357 AKDPKYIAPAYAETQPKTIFA 295 KDPK+IAPAY++TQPK +FA Sbjct: 614 EKDPKFIAPAYSQTQPKPVFA 634
>tr|B6SKZ4|B6SKZ4_MAIZE Nucleotide binding protein OS=Zea mays PE=2 SV=1 Length = 622
Score = 145 bits (366), Expect = 1e-33 Identities = 66/81 (81%), Positives = 74/81 (91%) Frame = -3
Query: 537 DPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKYADVA 358 DP+KS +P+ PV GPG+GGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPR AILKYAD A Sbjct: 533 DPLKSHKPEAPVNGPGYGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPREAILKYADAA 592
Query: 357 AKDPKYIAPAYAETQPKTIFA 295 KDPK+IAPAY++TQPK +FA Sbjct: 593 EKDPKFIAPAYSQTQPKPVFA 613
>tr|Q9SK69|Q9SK69_ARATH Putative WD-40 repeat protein (At2g20330/F11A3.12) OS=Arabidopsis thaliana GN=At2g20330 PE=2 SV=1 Length = 648
Score = 140 bits (352), Expect = 6e-32 Identities = 63/81 (77%), Positives = 74/81 (91%) Frame = -3
Query: 537 DPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKYADVA 358 DPMKS +P++P+TGPG GGRVGTT LLTQYLLK+GG+IKETWM+EDPR AILKYA+VA Sbjct: 555 DPMKSHKPEIPMTGPGHGGRVGTTGSGLLTQYLLKQGGMIKETWMEEDPREAILKYAEVA 614
Query: 357 AKDPKYIAPAYAETQPKTIFA 295 KDPK+IAPAY++TQPKTIFA Sbjct: 615 VKDPKFIAPAYSQTQPKTIFA 635
>tr|Q293F7|Q293F7_DROPS GA18958 OS=Drosophila pseudoobscura pseudoobscura GN=GA18958 PE=4 SV=2 Length = 644
Score = 89.4 bits (220), Expect = 1e-16 Identities = 47/81 (58%), Positives = 61/81 (75%) Frame = -3
Query: 537 DPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKYADVA 358 DP+KSKRPDLP+T G GGRV ++ G+L + Y+++ GL K D+DPR AILKYA A Sbjct: 546 DPVKSKRPDLPITS-GQGGRVASSGGTL-SSYVIRNLGLSKRVDDDQDPREAILKYAKDA 603
Query: 357 AKDPKYIAPAYAETQPKTIFA 295 A++P +IAPAY ETQPK IF+ Sbjct: 604 AENPYWIAPAYKETQPKAIFS 624
>tr|B4GBL0|B4GBL0_DROPE GL11034 OS=Drosophila persimilis GN=GL11034 PE=4 SV=1 Length = 644
Score = 89.4 bits (220), Expect = 1e-16 Identities = 47/81 (58%), Positives = 61/81 (75%) Frame = -3
Query: 537 DPMKSKRPDLPVTGPGFGGRVGTTKGSLLTQYLLKEGGLIKETWMDEDPRAAILKYADVA 358 DP+KSKRPDLP+T G GGRV ++ G+L + Y+++ GL K D+DPR AILKYA A Sbjct: 546 DPVKSKRPDLPITS-GQGGRVASSGGTL-SSYVIRNLGLSKRVDDDQDPREAILKYAKDA 603
Query: 357 AKDPKYIAPAYAETQPKTIFA 295 A++P +IAPAY ETQPK IF+ Sbjct: 604 AENPYWIAPAYKETQPKAIFS 624
|