BP916873
Clone id YMU001_000093_A10
Library
Length 371
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000093_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGCGGGTATGCTAGATGATGCAAGGAAGGTGGAAGCATTGCGAATTCAGAAGCAAGCATG
GAAAGAGAAACAAACTGATTTATGGTTGAATTTAAATGAATATACACATGCGATCCCTGA
TCTGAATTGATTTGCTTCTGTTCACAGCAGATGCCATGGCACATGCCACTGATTTTTCTT
TGGGATTATCATTAAATTTGGGATGAATTAAGTATTGCTTGTATCTGAAGTATTATAATG
GCCTGGAGTCTTTGAAAGTCAGGAACCTAAGTCTGCATAACATTTGCATGCTAATTTAGC
ATGTCATGGAGTACATGCCAACGGATCCCAAGCTATAAAATAAATGCGAACTCTTATAGA
GACAAACAGAT
■■Homology search results ■■ -
sp_hit_id Q6YZA6
Definition sp|Q6YZA6|GL85_ORYSJ Germin-like protein 8-5 OS=Oryza sativa subsp. japonica
Align length 30
Score (bit) 28.9
E-value 8.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916873|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_A10.
(371 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6YZA6|GL85_ORYSJ Germin-like protein 8-5 OS=Oryza sativa sub... 29 8.3

>sp|Q6YZA6|GL85_ORYSJ Germin-like protein 8-5 OS=Oryza sativa subsp.
japonica GN=Os08g0189400 PE=2 SV=1
Length = 224

Score = 28.9 bits (63), Expect = 8.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2

Query: 229 FRYKQYLIHPKFNDNPKEKSVACAMASAVN 140
F + Q LIH +FN NP + +VA A S+ N
Sbjct: 149 FVFPQGLIHFQFNPNPHQPAVAIAALSSQN 178


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916873|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_A10.
(371 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******