BP916876
Clone id YMU001_000093_B01
Library
Length 507
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000093_B01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCTAAATAAAGTTTAGGACATGCATATTCAAACTATGAACAATAAATGACATGCAATACA
TATGGACCGATGAGACGCATCGAAAAGACCCATTGGTCAGCATTGAGCTGCTGCTGCTGC
TCTGGTCTTGTGTTACATGACTCGCACTATGTTGCATTTGTGCCCACCATGCTCTTCACC
CAAAATCAGACTTACTTGTGGAATGACCAATCCATAGCCCGGCTCTTCCCTGTCCTTCAT
GGCAAAAGGAAACTGCCAATTACATTTTTCTGATAGAAATGAGACCTCACAACAAAGTAG
CCAAAAGCAGATTGCAGGCACCTCGATGAACATCTAAGCACCAGCCCTGCCCTTTCTTAA
AAACAGCATTGTGCGATTATGGTTGGCTTAGAACACAGAAAACCCAGAGCACAAAGTCAA
AATAATCATCCCGAAAACTCCATGTGCCTTCTCTTTGGACAAGGCTTGAATGGAGGTTAT
TTACAATCCCTCTCATAACAATCATGA
■■Homology search results ■■ -
sp_hit_id Q7NTX4
Definition sp|Q7NTX4|ISPZ_CHRVO Probable intracellular septation protein OS=Chromobacterium violaceum
Align length 38
Score (bit) 29.6
E-value 8.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916876|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_B01.
(507 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7NTX4|ISPZ_CHRVO Probable intracellular septation protein OS... 30 8.6
sp|Q8N6G6|ATL1_HUMAN ADAMTS-like protein 1 OS=Homo sapiens GN=AD... 30 8.6
sp|Q46244|ANFG_CLOPA Nitrogenase iron-iron protein delta chain O... 30 8.6

>sp|Q7NTX4|ISPZ_CHRVO Probable intracellular septation protein
OS=Chromobacterium violaceum GN=ispZ PE=3 SV=1
Length = 177

Score = 29.6 bits (65), Expect = 8.6
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +1

Query: 73 RRIEKTHWSALSCCCCSG---LVLHDSHYVAFVPTMLF 177
R+++ W +L G L+LHD H++ + PT+L+
Sbjct: 46 RKVDTMQWISLGLIVVLGGATLLLHDKHFIMWKPTVLY 83


>sp|Q8N6G6|ATL1_HUMAN ADAMTS-like protein 1 OS=Homo sapiens
GN=ADAMTSL1 PE=1 SV=3
Length = 525

Score = 29.6 bits (65), Expect = 8.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1

Query: 22 AYSNYEQ*MTCNTYGPMRRIEKTHWSALSCCCCSGL 129
A Y+Q M + Y P+ R E T W+A S C G+
Sbjct: 361 ASDGYKQIMPYDLYHPLPRWEATPWTACSSSCGGGI 396


>sp|Q46244|ANFG_CLOPA Nitrogenase iron-iron protein delta chain
OS=Clostridium pasteurianum GN=anfG PE=3 SV=1
Length = 116

Score = 29.6 bits (65), Expect = 8.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1

Query: 279 FLSEKCNWQFPFAMKDREEPGYGLVIPQVSLILGEE 172
++ + C WQF DRE G++ ++LGEE
Sbjct: 15 YIMKNCLWQFHSRKWDRERQNEGILTKTKQILLGEE 50


tr_hit_id Q2GUH6
Definition tr|Q2GUH6|Q2GUH6_CHAGB Ubiquitin carboxyl-terminal hydrolase OS=Chaetomium globosum
Align length 55
Score (bit) 36.2
E-value 0.94
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP916876|Adiantum capillus-veneris mRNA, clone:
YMU001_000093_B01.
(507 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2GUH6|Q2GUH6_CHAGB Ubiquitin carboxyl-terminal hydrolase OS=... 36 0.94
tr|B6X5F9|B6X5F9_9ENTR Putative uncharacterized protein OS=Provi... 36 1.2
tr|B2AD58|B2AD58_PODAN Predicted CDS Pa_4_160 OS=Podospora anser... 36 1.2
tr|A6U5R1|A6U5R1_SINMW Transposase IS116/IS110/IS902 family prot... 35 2.7
tr|Q2C877|Q2C877_9GAMM Putative uncharacterized protein OS=Photo... 33 6.1
tr|Q6CJH1|Q6CJH1_KLULA Ubiquitin carboxyl-terminal hydrolase OS=... 33 6.1
tr|Q7S5R6|Q7S5R6_NEUCR Ubiquitin carboxyl-terminal hydrolase OS=... 33 8.0

>tr|Q2GUH6|Q2GUH6_CHAGB Ubiquitin carboxyl-terminal hydrolase
OS=Chaetomium globosum GN=CHGG_08378 PE=3 SV=1
Length = 781

Score = 36.2 bits (82), Expect = 0.94
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1

Query: 106 SCCCCSGLVLHDSHYVAFVPTMLFTQNQTYLWNDQSIARLFPVLHGKRKLPITFF 270
S C G +H HYVAF+ L + L+ND+ + ++ V K+ + FF
Sbjct: 724 SIACHKGTSIHTGHYVAFIRKKLGDETSWVLFNDEKVVKVVDVEEMKKFAYVYFF 778


>tr|B6X5F9|B6X5F9_9ENTR Putative uncharacterized protein
OS=Providencia rustigianii DSM 4541 GN=PROVRUST_02466
PE=4 SV=1
Length = 776

Score = 35.8 bits (81), Expect = 1.2
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = -3

Query: 343 WCLDVHRGACNXXXXXXXXXLISIRKM*LAVSFCHEGQGRAGLWIGHSTSKSDFG*-RAW 167
W L++HR N IR A++F + G+ RA + K W
Sbjct: 681 WILEIHRNQPNVLIHPEDAGERGIRDGEWAIAFNNRGEHRAIAVVTTHIKKGVISLDNGW 740

Query: 166 WAQMQHSASHVTQDQ 122
W Q S+SHVT DQ
Sbjct: 741 WEQQGGSSSHVTNDQ 755


>tr|B2AD58|B2AD58_PODAN Predicted CDS Pa_4_160 OS=Podospora anserina
PE=4 SV=1
Length = 779

Score = 35.8 bits (81), Expect = 1.2
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1

Query: 106 SCCCCSGLVLHDSHYVAFVPTMLFTQNQTYLWNDQSIARLFPVLHGKRKLPITFF 270
S C G +H HYVAF+ L Q L+ND+ + ++ V K+ + FF
Sbjct: 722 SIVCHKGTSIHAGHYVAFIRKKLGEQTSWVLFNDEKVVKVEDVEEMKKFAYVYFF 776


>tr|A6U5R1|A6U5R1_SINMW Transposase IS116/IS110/IS902 family protein
OS=Sinorhizobium medicae (strain WSM419) GN=Smed_0131
PE=4 SV=1
Length = 323

Score = 34.7 bits (78), Expect = 2.7
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1

Query: 301 PKADCRHLDEHLSTSPALS*KQHCAIMVGLEHRKPRAQSQNNHPENSM 444
P+A H D++ AL + HCA HRK Q QNN P N +
Sbjct: 264 PRAFKSHADQNEGGRQALQGRHHCACPQIARHRKRHHQGQNNLPTNHL 311


>tr|Q2C877|Q2C877_9GAMM Putative uncharacterized protein
OS=Photobacterium sp. SKA34 GN=SKA34_06605 PE=4 SV=1
Length = 344

Score = 33.5 bits (75), Expect = 6.1
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Frame = +1

Query: 25 YSNYEQ*MTCNTYGPMRRIEKTHWSALSCCCCS-----GLVLHD----SHYVAFVPTMLF 177
+ NY+ + + + ++++E WS L+ CCS G+ +D + + F+ +L+
Sbjct: 249 FGNYD---SFHEWSQIKQVELWAWSLLALTCCSIAIIIGIKANDVMTRTFGITFMLIVLY 305

Query: 178 TQNQTYLWNDQSIARLFPVL 237
T+ TY W + A F +L
Sbjct: 306 TEYFTYFWGEIHKALFFAIL 325


>tr|Q6CJH1|Q6CJH1_KLULA Ubiquitin carboxyl-terminal hydrolase
OS=Kluyveromyces lactis GN=KLLA0F18700g PE=3 SV=1
Length = 770

Score = 33.5 bits (75), Expect = 6.1
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1

Query: 67 PMRRIEKTHWSALSCCCCSGLVLHDSHYVAFVPTMLFTQNQTYLWNDQSI 216
P I + + C G +H HYVAF+ ++ + Q L+ND+ I
Sbjct: 696 PASSIASAKYKLTAVICHKGNSVHSGHYVAFIKKVVEGKEQWVLYNDEKI 745


>tr|Q7S5R6|Q7S5R6_NEUCR Ubiquitin carboxyl-terminal hydrolase
OS=Neurospora crassa GN=NCU05777 PE=3 SV=1
Length = 788

Score = 33.1 bits (74), Expect = 8.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1

Query: 106 SCCCCSGLVLHDSHYVAFVPTMLFTQNQTY-LWNDQSIARLFPVLHGKRKLPITFF 270
S C G +H HYVAF+ L ++ L+ND+ + ++ V K+ + FF
Sbjct: 730 SIVCHKGTSIHAGHYVAFIRKKLSEDETSWVLFNDEKVVKVVDVEEMKKTAYVYFF 785